RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 LINC00575Q6W349 94 aa3.69□□□□□ -1.82
LINC01001-202ENST00000527683 Q8N814 137 aa3.69□□□□□ -1.82
LINC01001-202ENST00000527683 MYCBP2O75592 4640 aa3.69□□□□□ -1.82
LINC01001-202ENST00000527683 SRRM2Q9UQ35 2752 aaKnown RBP3.68□□□□□ -1.82
LINC01001-202ENST00000527683 TEX49A0A1B0GTD5 131 aa3.68□□□□□ -1.82
LINC01001-202ENST00000527683 hADV29S1A0JD25 119 aa3.68□□□□□ -1.82
LINC01001-202ENST00000527683 TMEM256-PLSCR3K7ERE1 68 aa3.68□□□□□ -1.82
LINC01001-202ENST00000527683 COX7BP24311 80 aa3.68□□□□□ -1.82
LINC01001-202ENST00000527683 ELOF1P60002 83 aaKnown RBP3.68□□□□□ -1.82
LINC01001-202ENST00000527683 KRTAP10-4P60372 401 aaPredicted RBP3.68□□□□□ -1.82
LINC01001-202ENST00000527683 Q6ZSA8 131 aa3.68□□□□□ -1.82
LINC01001-202ENST00000527683 KCNQ1DNQ9H478 68 aa3.68□□□□□ -1.82
LINC01001-202ENST00000527683 JMJD7-PLA2G4BH0Y9G9 81 aa3.67□□□□□ -1.82
LINC01001-202ENST00000527683 ACYP1P07311 99 aa3.67□□□□□ -1.82
LINC01001-202ENST00000527683 GAGE2BQ13066 116 aa3.67□□□□□ -1.82
LINC01001-202ENST00000527683 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.67□□□□□ -1.82
LINC01001-202ENST00000527683 OXTP01178 125 aa3.66□□□□□ -1.82
LINC01001-202ENST00000527683 MT-ATP8P03928 68 aa3.66□□□□□ -1.82
LINC01001-202ENST00000527683 C9orf163Q8N9P6 203 aa3.66□□□□□ -1.82
LINC01001-202ENST00000527683 C7orf33Q8WU49 177 aa3.66□□□□□ -1.82
LINC01001-202ENST00000527683 OBSCN-AS1Q96MR7 158 aa3.66□□□□□ -1.82
LINC01001-202ENST00000527683 LINC00474Q9P2X8 69 aa3.66□□□□□ -1.82
LINC01001-202ENST00000527683 VPS13BQ7Z7G8 4022 aa3.66□□□□□ -1.82
LINC01001-202ENST00000527683 IGLV1-50A0A075B6I6 118 aa3.65□□□□□ -1.83
LINC01001-202ENST00000527683 SPRR1AP35321 89 aa3.65□□□□□ -1.83
LINC01001-202ENST00000527683 KRTAP10-6P60371 365 aaPredicted RBP3.65□□□□□ -1.83
LINC01001-202ENST00000527683 MRPL55Q7Z7F7 128 aaKnown RBP3.65□□□□□ -1.83
LINC01001-202ENST00000527683 DHRS4-AS1Q9P1J3 65 aa3.65□□□□□ -1.83
LINC01001-202ENST00000527683 C22orf24Q9Y442 160 aa3.65□□□□□ -1.83
LINC01001-202ENST00000527683 UBR4Q5T4S7 5183 aa3.64□□□□□ -1.83
LINC01001-202ENST00000527683 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.64□□□□□ -1.83
LINC01001-202ENST00000527683 A0A096LNI7 61 aa3.64□□□□□ -1.83
LINC01001-202ENST00000527683 ETDCA0A1B0GVM5 59 aa3.64□□□□□ -1.83
LINC01001-202ENST00000527683 Q6ZQY7 126 aa3.64□□□□□ -1.83
LINC01001-202ENST00000527683 Q6ZRX8 168 aa3.64□□□□□ -1.83
LINC01001-202ENST00000527683 SCXQ7RTU7 201 aa3.64□□□□□ -1.83
LINC01001-202ENST00000527683 FAM19A5Q7Z5A7 132 aaPredicted RBP3.64□□□□□ -1.83
LINC01001-202ENST00000527683 FAM168BA1KXE4 195 aa3.63□□□□□ -1.83
LINC01001-202ENST00000527683 PDE6GP18545 87 aa3.63□□□□□ -1.83
LINC01001-202ENST00000527683 NDUFV3P56181 108 aaKnown RBP3.63□□□□□ -1.83
LINC01001-202ENST00000527683 PRR26Q8N8Z3 221 aa3.63□□□□□ -1.83
LINC01001-202ENST00000527683 CIRBP-AS1Q8TBR5 109 aa3.63□□□□□ -1.83
LINC01001-202ENST00000527683 DNAH8Q96JB1 4490 aa3.63□□□□□ -1.83
LINC01001-202ENST00000527683 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
LINC01001-202ENST00000527683 IGKV2-24A0A0C4DH68 120 aa3.62□□□□□ -1.83
LINC01001-202ENST00000527683 RPL37AP8A6NKH3 93 aa3.62□□□□□ -1.83
LINC01001-202ENST00000527683 KRTAP4-16G5E9R7 235 aaPredicted RBP3.62□□□□□ -1.83
LINC01001-202ENST00000527683 CCDC179H3BU77 68 aa3.62□□□□□ -1.83
LINC01001-202ENST00000527683 Q6Q795 121 aa3.62□□□□□ -1.83
LINC01001-202ENST00000527683 REG3GQ6UW15 175 aa3.62□□□□□ -1.83
LINC01001-202ENST00000527683 KRTAP7-1Q8IUC3 87 aa3.62□□□□□ -1.83
LINC01001-202ENST00000527683 LAMTOR3Q9UHA4 124 aa3.62□□□□□ -1.83
LINC01001-202ENST00000527683 LRP1Q07954 4544 aaKnown RBP3.62□□□□□ -1.83
LINC01001-202ENST00000527683 LOC110117498A0A087WWA1 95 aa3.61□□□□□ -1.83
LINC01001-202ENST00000527683 MT1HL1P0DM35 61 aa3.61□□□□□ -1.83
LINC01001-202ENST00000527683 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
LINC01001-202ENST00000527683 RBM3P98179 157 aaKnown RBP3.61□□□□□ -1.83
LINC01001-202ENST00000527683 GAGE2AQ6NT46 116 aa3.61□□□□□ -1.83
LINC01001-202ENST00000527683 SDIM1Q6ZPB5 146 aa3.61□□□□□ -1.83
LINC01001-202ENST00000527683 C14orf132Q9NPU4 83 aa3.61□□□□□ -1.83
LINC01001-202ENST00000527683 HMCN2Q8NDA2 5059 aa3.6□□□□□ -1.83
LINC01001-202ENST00000527683 H0Y9J4 135 aa3.6□□□□□ -1.83
LINC01001-202ENST00000527683 J3KT08 172 aa3.6□□□□□ -1.83
LINC01001-202ENST00000527683 CCKP06307 115 aa3.6□□□□□ -1.83
LINC01001-202ENST00000527683 UBE2BP63146 152 aa3.6□□□□□ -1.83
LINC01001-202ENST00000527683 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
LINC01001-202ENST00000527683 SPACA4Q8TDM5 124 aa3.6□□□□□ -1.83
LINC01001-202ENST00000527683 DSCR8Q96T75 97 aa3.6□□□□□ -1.83
LINC01001-202ENST00000527683 IGLV5-48A0A075B6I7 105 aa3.59□□□□□ -1.83
LINC01001-202ENST00000527683 A0A1W2PNN7 141 aa3.59□□□□□ -1.83
LINC01001-202ENST00000527683 LINC00643Q86TS7 51 aa3.59□□□□□ -1.83
LINC01001-202ENST00000527683 Q9BRP9 147 aa3.59□□□□□ -1.83
LINC01001-202ENST00000527683 TRBV7-4A0A0J9YYF1 115 aa3.58□□□□□ -1.84
LINC01001-202ENST00000527683 CHTF8P0CG12 524 aa3.58□□□□□ -1.84
LINC01001-202ENST00000527683 ATP5EP2Q5VTU8 51 aa3.58□□□□□ -1.84
LINC01001-202ENST00000527683 Q6ZQT0 140 aa3.58□□□□□ -1.84
LINC01001-202ENST00000527683 FAM19A1Q7Z5A9 133 aa3.58□□□□□ -1.84
LINC01001-202ENST00000527683 IMUPQ9GZP8 106 aa3.58□□□□□ -1.84
LINC01001-202ENST00000527683 TRBV7-7A0A0K0K1E9 115 aa3.57□□□□□ -1.84
LINC01001-202ENST00000527683 RPL37AP61513 92 aaKnown RBP3.57□□□□□ -1.84
LINC01001-202ENST00000527683 C9orf153Q5TBE3 101 aa3.57□□□□□ -1.84
LINC01001-202ENST00000527683 PHF5AQ7RTV0 110 aaKnown RBP3.57□□□□□ -1.84
LINC01001-202ENST00000527683 A0A1B0GW54 56 aa3.56□□□□□ -1.84
LINC01001-202ENST00000527683 BCE1O60756 84 aa3.56□□□□□ -1.84
LINC01001-202ENST00000527683 LINC01547P58512 204 aaPredicted RBP3.56□□□□□ -1.84
LINC01001-202ENST00000527683 Q6JHZ5 121 aa3.56□□□□□ -1.84
LINC01001-202ENST00000527683 Q8N377 158 aa3.56□□□□□ -1.84
LINC01001-202ENST00000527683 SMCR5Q8TEV8 140 aa3.56□□□□□ -1.84
LINC01001-202ENST00000527683 DPH3Q96FX2 82 aa3.56□□□□□ -1.84
LINC01001-202ENST00000527683 UBL5Q9BZL1 73 aa3.56□□□□□ -1.84
LINC01001-202ENST00000527683 LINC00846Q9NV44 126 aa3.56□□□□□ -1.84
LINC01001-202ENST00000527683 PLAC8Q9NZF1 115 aa3.56□□□□□ -1.84
LINC01001-202ENST00000527683 F8WEM9 126 aa3.55□□□□□ -1.84
LINC01001-202ENST00000527683 PANO1I0J062 215 aa3.55□□□□□ -1.84
LINC01001-202ENST00000527683 UBE2AP49459 152 aa3.55□□□□□ -1.84
LINC01001-202ENST00000527683 FAT3Q8TDW7 4589 aa3.55□□□□□ -1.84
LINC01001-202ENST00000527683 ERC2-IT1O76042 136 aa3.54□□□□□ -1.84
LINC01001-202ENST00000527683 RPS28P62857 69 aaKnown RBP3.54□□□□□ -1.84
LINC01001-202ENST00000527683 PRLHP81277 87 aa3.54□□□□□ -1.84
LINC01001-202ENST00000527683 C3orf22Q8N5N4 141 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms