RNA–Protein interactions for RNA: ENST00000527498.1

PUM1-219, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-219ENST00000527498 LINC00574Q9H8X3 128 aa2.48□□□□□ -2.01
PUM1-219ENST00000527498 IGHV3-43A0A0B4J1X8 118 aa2.47□□□□□ -2.01
PUM1-219ENST00000527498 DEFB4AO15263 64 aa2.47□□□□□ -2.01
PUM1-219ENST00000527498 DEFA4P12838 97 aa2.47□□□□□ -2.01
PUM1-219ENST00000527498 MOBPQ13875 183 aa2.47□□□□□ -2.01
PUM1-219ENST00000527498 C2orf83Q53S99 150 aa2.47□□□□□ -2.01
PUM1-219ENST00000527498 C1orf134Q5TEV5 83 aa2.47□□□□□ -2.01
PUM1-219ENST00000527498 Q5VSD8 79 aa2.47□□□□□ -2.01
PUM1-219ENST00000527498 Q86TA4 180 aa2.47□□□□□ -2.01
PUM1-219ENST00000527498 SND1-IT1Q9HBX3 110 aa2.47□□□□□ -2.01
PUM1-219ENST00000527498 IGKV1-6A0A0C4DH72 117 aa2.46□□□□□ -2.02
PUM1-219ENST00000527498 IGKV1-12A0A0C4DH73 117 aa2.46□□□□□ -2.02
PUM1-219ENST00000527498 IGKV1D-12P01611 117 aa2.46□□□□□ -2.02
PUM1-219ENST00000527498 TSPEAR-AS2P59090 65 aa2.46□□□□□ -2.02
PUM1-219ENST00000527498 KRTAP7-1Q8IUC3 87 aa2.46□□□□□ -2.02
PUM1-219ENST00000527498 Q9BRP9 147 aa2.46□□□□□ -2.02
PUM1-219ENST00000527498 SMIM2Q9BVW6 85 aa2.46□□□□□ -2.02
PUM1-219ENST00000527498 ORMDL1Q9P0S3 153 aa2.46□□□□□ -2.02
PUM1-219ENST00000527498 C22orf24Q9Y442 160 aa2.46□□□□□ -2.02
PUM1-219ENST00000527498 TRAV10A0A0B4J240 114 aa2.45□□□□□ -2.02
PUM1-219ENST00000527498 IGKV3D-20A0A0C4DH25 116 aa2.45□□□□□ -2.02
PUM1-219ENST00000527498 H3BUA1 57 aa2.45□□□□□ -2.02
PUM1-219ENST00000527498 BPY2O14599 106 aa2.45□□□□□ -2.02
PUM1-219ENST00000527498 IGHV3-30-3P0DP02 117 aa2.45□□□□□ -2.02
PUM1-219ENST00000527498 UBE2DNLQ8IWF7 75 aa2.45□□□□□ -2.02
PUM1-219ENST00000527498 Q8N814 137 aa2.45□□□□□ -2.02
PUM1-219ENST00000527498 C14orf132Q9NPU4 83 aa2.45□□□□□ -2.02
PUM1-219ENST00000527498 RNF213Q63HN8 5207 aa2.44□□□□□ -2.02
PUM1-219ENST00000527498 IGLV4-69A0A075B6H9 119 aa2.44□□□□□ -2.02
PUM1-219ENST00000527498 TRAV12-3A0A0B4J271 114 aa2.44□□□□□ -2.02
PUM1-219ENST00000527498 TRAV21A0A0B4J279 112 aa2.44□□□□□ -2.02
PUM1-219ENST00000527498 PIGYQ3MUY2 71 aa2.44□□□□□ -2.02
PUM1-219ENST00000527498 SPANXA2-OT1Q8N9U9 137 aa2.44□□□□□ -2.02
PUM1-219ENST00000527498 S4R3C0 116 aa2.44□□□□□ -2.02
PUM1-219ENST00000527498 LOC110117498A0A087WWA1 95 aa2.43□□□□□ -2.02
PUM1-219ENST00000527498 DEFB131BA0A096LNP1 70 aa2.43□□□□□ -2.02
PUM1-219ENST00000527498 IGHV7-4-1A0A0J9YVY3 117 aa2.43□□□□□ -2.02
PUM1-219ENST00000527498 TRBV6-5A0A0K0K1A5 114 aa2.43□□□□□ -2.02
PUM1-219ENST00000527498 SMR3BP02814 79 aaPredicted RBP2.43□□□□□ -2.02
PUM1-219ENST00000527498 CTSGP08311 255 aa2.43□□□□□ -2.02
PUM1-219ENST00000527498 APELAP0DMC3 54 aa2.43□□□□□ -2.02
PUM1-219ENST00000527498 ERHP84090 104 aaKnown RBP2.43□□□□□ -2.02
PUM1-219ENST00000527498 ZFAND2AQ8N6M9 145 aa2.43□□□□□ -2.02
PUM1-219ENST00000527498 Q8NAQ8 132 aa2.43□□□□□ -2.02
PUM1-219ENST00000527498 USMG5Q96IX5 58 aa2.43□□□□□ -2.02
PUM1-219ENST00000527498 PRR15LQ9BU68 103 aa2.43□□□□□ -2.02
PUM1-219ENST00000527498 A0A1B0GVX0 72 aa2.42□□□□□ -2.02
PUM1-219ENST00000527498 H3BPC8 53 aa2.42□□□□□ -2.02
PUM1-219ENST00000527498 CRIP1P50238 77 aa2.42□□□□□ -2.02
PUM1-219ENST00000527498 ROMO1P60602 79 aa2.42□□□□□ -2.02
PUM1-219ENST00000527498 CNBPP62633 177 aaKnown RBP2.42□□□□□ -2.02
PUM1-219ENST00000527498 ZNF625Q96I27 306 aaPredicted RBP2.42□□□□□ -2.02
PUM1-219ENST00000527498 LINC00167Q96N53 147 aa2.42□□□□□ -2.02
PUM1-219ENST00000527498 CHCHD7Q9BUK0 85 aa2.42□□□□□ -2.02
PUM1-219ENST00000527498 NDUFA4L2Q9NRX3 87 aa2.42□□□□□ -2.02
PUM1-219ENST00000527498 LINC01558Q9Y6Z2 57 aa2.42□□□□□ -2.02
PUM1-219ENST00000527498 PKHD1L1Q86WI1 4243 aa2.41□□□□□ -2.02
PUM1-219ENST00000527498 IGHV3-21A0A0B4J1V1 117 aa2.41□□□□□ -2.02
PUM1-219ENST00000527498 NBDYA0A0U1RRE5 68 aa2.41□□□□□ -2.02
PUM1-219ENST00000527498 K7ERS5 55 aa2.41□□□□□ -2.02
PUM1-219ENST00000527498 CRPP02741 224 aa2.41□□□□□ -2.02
PUM1-219ENST00000527498 HAMPP81172 84 aa2.41□□□□□ -2.02
PUM1-219ENST00000527498 PRCDQ00LT1 54 aa2.41□□□□□ -2.02
PUM1-219ENST00000527498 RPL39P5Q59GN2 51 aa2.41□□□□□ -2.02
PUM1-219ENST00000527498 C15orf56Q8N910 161 aa2.41□□□□□ -2.02
PUM1-219ENST00000527498 C8orf17Q9NRJ1 99 aa2.41□□□□□ -2.02
PUM1-219ENST00000527498 LENEPQ9Y5L5 61 aa2.41□□□□□ -2.02
PUM1-219ENST00000527498 LRP1Q07954 4544 aaKnown RBP2.41□□□□□ -2.02
PUM1-219ENST00000527498 IGKV1OR2-108A0A075B7D4 117 aa2.4□□□□□ -2.03
PUM1-219ENST00000527498 IGHV3-73A0A0B4J1V6 119 aa2.4□□□□□ -2.03
PUM1-219ENST00000527498 LRCOL1A6NCL2 159 aa2.4□□□□□ -2.03
PUM1-219ENST00000527498 MIR7-3HGQ8N6C7 128 aa2.4□□□□□ -2.03
PUM1-219ENST00000527498 LINC00308Q8TCZ7 52 aa2.4□□□□□ -2.03
PUM1-219ENST00000527498 ZCCHC13Q8WW36 166 aaKnown RBP2.4□□□□□ -2.03
PUM1-219ENST00000527498 LINC00208Q96KT6 92 aa2.4□□□□□ -2.03
PUM1-219ENST00000527498 RNF5Q99942 180 aa2.4□□□□□ -2.03
PUM1-219ENST00000527498 HIGD2AQ9BW72 106 aa2.4□□□□□ -2.03
PUM1-219ENST00000527498 FAT3Q8TDW7 4589 aa2.4□□□□□ -2.03
PUM1-219ENST00000527498 A0A087WSZ3 146 aa2.39□□□□□ -2.03
PUM1-219ENST00000527498 IGHV3-49A0A0A0MS15 119 aa2.39□□□□□ -2.03
PUM1-219ENST00000527498 TRBV10-1A0A0K0K1A3 114 aa2.39□□□□□ -2.03
PUM1-219ENST00000527498 NDUFA1O15239 70 aa2.39□□□□□ -2.03
PUM1-219ENST00000527498 TLX1NBP0CAT3 122 aa2.39□□□□□ -2.03
PUM1-219ENST00000527498 RNASE13Q5GAN3 156 aaKnown RBP2.39□□□□□ -2.03
PUM1-219ENST00000527498 LCE1AQ5T7P2 110 aa2.39□□□□□ -2.03
PUM1-219ENST00000527498 LRP2P98164 4655 aa2.38□□□□□ -2.03
PUM1-219ENST00000527498 IGHV3OR16-8A0A075B7F1 116 aa2.38□□□□□ -2.03
PUM1-219ENST00000527498 NCR3O14931 201 aa2.38□□□□□ -2.03
PUM1-219ENST00000527498 PRB4P10163 310 aaPredicted RBP2.38□□□□□ -2.03
PUM1-219ENST00000527498 KRTAP10-1P60331 282 aa2.38□□□□□ -2.03
PUM1-219ENST00000527498 SPAG11BQ08648 103 aa2.38□□□□□ -2.03
PUM1-219ENST00000527498 MIR22HGQ0VDD5 57 aa2.38□□□□□ -2.03
PUM1-219ENST00000527498 SPINK9Q5DT21 86 aa2.38□□□□□ -2.03
PUM1-219ENST00000527498 SPAG11AQ6PDA7 123 aa2.38□□□□□ -2.03
PUM1-219ENST00000527498 Q6ZQT0 140 aa2.38□□□□□ -2.03
PUM1-219ENST00000527498 NTM-AS1Q6ZSK4 140 aa2.38□□□□□ -2.03
PUM1-219ENST00000527498 Q8NDZ9 215 aa2.38□□□□□ -2.03
PUM1-219ENST00000527498 COX7B2Q8TF08 81 aa2.38□□□□□ -2.03
PUM1-219ENST00000527498 PLAC8Q9NZF1 115 aa2.38□□□□□ -2.03
PUM1-219ENST00000527498 KLK9Q9UKQ9 250 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms