RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 SPRR4Q96PI1 79 aa12.02□□□□□ -0.49
PPP1CA-204ENST00000526510 VPS13BQ7Z7G8 4022 aa12.01□□□□□ -0.49
PPP1CA-204ENST00000526510 CCKP06307 115 aa12□□□□□ -0.49
PPP1CA-204ENST00000526510 DSCR8Q96T75 97 aa12□□□□□ -0.49
PPP1CA-204ENST00000526510 FAM240AA0A1B0GVK7 77 aa11.98□□□□□ -0.49
PPP1CA-204ENST00000526510 CDIP1Q9H305 208 aa11.97□□□□□ -0.49
PPP1CA-204ENST00000526510 SMR3BP02814 79 aaPredicted RBP11.97□□□□□ -0.49
PPP1CA-204ENST00000526510 LINC00483Q53H64 154 aa11.97□□□□□ -0.49
PPP1CA-204ENST00000526510 ZNF706Q9Y5V0 76 aaPredicted RBP11.95□□□□□ -0.5
PPP1CA-204ENST00000526510 PDE6GP18545 87 aa11.94□□□□□ -0.5
PPP1CA-204ENST00000526510 IGLV8-61A0A075B6I0 122 aa11.93□□□□□ -0.5
PPP1CA-204ENST00000526510 F8WEM9 126 aa11.93□□□□□ -0.5
PPP1CA-204ENST00000526510 ANAPC11Q9NYG5 84 aa11.93□□□□□ -0.5
PPP1CA-204ENST00000526510 ACYP1P07311 99 aa11.92□□□□□ -0.5
PPP1CA-204ENST00000526510 RPL37AP61513 92 aaKnown RBP11.91□□□□□ -0.5
PPP1CA-204ENST00000526510 VPS25Q9BRG1 176 aa11.91□□□□□ -0.5
PPP1CA-204ENST00000526510 A0A0G2JQZ4 141 aa11.91□□□□□ -0.5
PPP1CA-204ENST00000526510 LINC00846Q9NV44 126 aa11.89□□□□□ -0.51
PPP1CA-204ENST00000526510 A0A1W2PNM2 257 aa11.88□□□□□ -0.51
PPP1CA-204ENST00000526510 IGFL1Q6UW32 110 aa11.88□□□□□ -0.51
PPP1CA-204ENST00000526510 KRTAP10-4P60372 401 aaPredicted RBP11.87□□□□□ -0.51
PPP1CA-204ENST00000526510 FAT1Q14517 4588 aa11.86□□□□□ -0.51
PPP1CA-204ENST00000526510 IGLV9-49A0A0B4J1Y8 123 aa11.85□□□□□ -0.51
PPP1CA-204ENST00000526510 Q8NBF4 154 aa11.83□□□□□ -0.52
PPP1CA-204ENST00000526510 C21orf62-AS1Q17RA5 79 aa11.81□□□□□ -0.52
PPP1CA-204ENST00000526510 Q6JHZ5 121 aa11.81□□□□□ -0.52
PPP1CA-204ENST00000526510 EPPK1P58107 5090 aaKnown RBP11.81□□□□□ -0.52
PPP1CA-204ENST00000526510 CDK2AP2O75956 126 aa11.81□□□□□ -0.52
PPP1CA-204ENST00000526510 C9orf153Q5TBE3 101 aa11.81□□□□□ -0.52
PPP1CA-204ENST00000526510 KRTAP1-4P0C5Y4 121 aa11.8□□□□□ -0.52
PPP1CA-204ENST00000526510 HSPG2P98160 4391 aa11.79□□□□□ -0.52
PPP1CA-204ENST00000526510 MOBPQ13875 183 aa11.78□□□□□ -0.52
PPP1CA-204ENST00000526510 SPINK6Q6UWN8 80 aa11.78□□□□□ -0.52
PPP1CA-204ENST00000526510 MT-ATP8P03928 68 aa11.77□□□□□ -0.53
PPP1CA-204ENST00000526510 A0A087X002 238 aa11.76□□□□□ -0.53
PPP1CA-204ENST00000526510 CRYGAP11844 174 aa11.76□□□□□ -0.53
PPP1CA-204ENST00000526510 RYR1P21817 5038 aa11.75□□□□□ -0.53
PPP1CA-204ENST00000526510 LINC00643Q86TS7 51 aa11.75□□□□□ -0.53
PPP1CA-204ENST00000526510 KRTAP13-2Q52LG2 175 aa11.74□□□□□ -0.53
PPP1CA-204ENST00000526510 Q6ZVQ6 151 aa11.74□□□□□ -0.53
PPP1CA-204ENST00000526510 A0A1B0GW54 56 aa11.73□□□□□ -0.53
PPP1CA-204ENST00000526510 FAM229BQ4G0N7 80 aa11.73□□□□□ -0.53
PPP1CA-204ENST00000526510 SIGMAR1Q99720 223 aa11.73□□□□□ -0.53
PPP1CA-204ENST00000526510 UBL5Q9BZL1 73 aa11.73□□□□□ -0.53
PPP1CA-204ENST00000526510 Q6Q795 121 aa11.71□□□□□ -0.53
PPP1CA-204ENST00000526510 KRTAP17-1Q9BYP8 105 aa11.71□□□□□ -0.53
PPP1CA-204ENST00000526510 PKHD1L1Q86WI1 4243 aa11.71□□□□□ -0.54
PPP1CA-204ENST00000526510 KIAA1109Q2LD37 5005 aa11.68□□□□□ -0.54
PPP1CA-204ENST00000526510 FAM229AH3BQW9 127 aa11.68□□□□□ -0.54
PPP1CA-204ENST00000526510 PLA2G1BP04054 148 aaKnown RBP11.68□□□□□ -0.54
PPP1CA-204ENST00000526510 A0A087WSZ3 146 aa11.67□□□□□ -0.54
PPP1CA-204ENST00000526510 TRBV7-7A0A0K0K1E9 115 aa11.66□□□□□ -0.54
PPP1CA-204ENST00000526510 Q5VSD8 79 aa11.66□□□□□ -0.54
PPP1CA-204ENST00000526510 IGKV3D-7A0A0C4DH55 119 aa11.65□□□□□ -0.54
PPP1CA-204ENST00000526510 NREPQ16612 68 aa11.65□□□□□ -0.54
PPP1CA-204ENST00000526510 HRCT1Q6UXD1 115 aa11.65□□□□□ -0.54
PPP1CA-204ENST00000526510 SSBP3-AS1Q7Z2R9 100 aa11.65□□□□□ -0.54
PPP1CA-204ENST00000526510 ATP5EP2Q5VTU8 51 aa11.59□□□□□ -0.55
PPP1CA-204ENST00000526510 PRR26Q8N8Z3 221 aa11.59□□□□□ -0.55
PPP1CA-204ENST00000526510 CXCL6P80162 114 aa11.55□□□□□ -0.56
PPP1CA-204ENST00000526510 CD164Q04900 197 aa11.55□□□□□ -0.56
PPP1CA-204ENST00000526510 TYMSOSQ8TAI1 123 aa11.55□□□□□ -0.56
PPP1CA-204ENST00000526510 Q8N1X5 172 aa11.54□□□□□ -0.56
PPP1CA-204ENST00000526510 BPY2O14599 106 aa11.53□□□□□ -0.56
PPP1CA-204ENST00000526510 IMUPQ9GZP8 106 aa11.53□□□□□ -0.56
PPP1CA-204ENST00000526510 DEFB116Q30KQ4 102 aa11.52□□□□□ -0.56
PPP1CA-204ENST00000526510 LINC00472Q9H8W2 130 aa11.52□□□□□ -0.56
PPP1CA-204ENST00000526510 SCGB1A1P11684 91 aa11.51□□□□□ -0.57
PPP1CA-204ENST00000526510 Q96NJ1 140 aa11.5□□□□□ -0.57
PPP1CA-204ENST00000526510 A0A087WVE0 104 aa11.49□□□□□ -0.57
PPP1CA-204ENST00000526510 DSCR10P59022 87 aa11.49□□□□□ -0.57
PPP1CA-204ENST00000526510 Q8N9L7 120 aa11.48□□□□□ -0.57
PPP1CA-204ENST00000526510 SS18L2Q9UHA2 77 aa11.48□□□□□ -0.57
PPP1CA-204ENST00000526510 HIST1H4AP62805 103 aaKnown RBP11.47□□□□□ -0.57
PPP1CA-204ENST00000526510 LRP1Q07954 4544 aaKnown RBP11.44□□□□□ -0.58
PPP1CA-204ENST00000526510 IGKV4-1P06312 121 aa11.44□□□□□ -0.58
PPP1CA-204ENST00000526510 LINC00304Q8N9R0 145 aa11.42□□□□□ -0.58
PPP1CA-204ENST00000526510 Q5XG85 94 aa11.41□□□□□ -0.58
PPP1CA-204ENST00000526510 K7EQZ3 153 aa11.4□□□□□ -0.58
PPP1CA-204ENST00000526510 ASB16-AS1Q495Z4 193 aa11.4□□□□□ -0.58
PPP1CA-204ENST00000526510 C4orf48Q5BLP8 95 aa11.4□□□□□ -0.59
PPP1CA-204ENST00000526510 SPINK1P00995 79 aa11.39□□□□□ -0.59
PPP1CA-204ENST00000526510 FLG2Q5D862 2391 aaPredicted RBP11.38□□□□□ -0.59
PPP1CA-204ENST00000526510 FAT3Q8TDW7 4589 aa11.38□□□□□ -0.59
PPP1CA-204ENST00000526510 FAM236AA0A1B0GUQ0 79 aa11.37□□□□□ -0.59
PPP1CA-204ENST00000526510 FAM236BA0A1B0GV22 79 aa11.37□□□□□ -0.59
PPP1CA-204ENST00000526510 KRTAP4-5Q9BYR2 181 aa11.37□□□□□ -0.59
PPP1CA-204ENST00000526510 J3KT08 172 aa11.36□□□□□ -0.59
PPP1CA-204ENST00000526510 KRTAP10-8P60410 259 aa11.36□□□□□ -0.59
PPP1CA-204ENST00000526510 TNXBP22105 4242 aa11.36□□□□□ -0.59
PPP1CA-204ENST00000526510 A8MWP4 228 aa11.35□□□□□ -0.59
PPP1CA-204ENST00000526510 SPAG11AQ6PDA7 123 aa11.35□□□□□ -0.59
PPP1CA-204ENST00000526510 BIRC6Q9NR09 4857 aa11.35□□□□□ -0.59
PPP1CA-204ENST00000526510 LIMD2Q9BT23 127 aa11.34□□□□□ -0.59
PPP1CA-204ENST00000526510 C1orf195Q5TG92 126 aa11.33□□□□□ -0.6
PPP1CA-204ENST00000526510 RPS29P62273 56 aaKnown RBP11.32□□□□□ -0.6
PPP1CA-204ENST00000526510 PRR15Q8IV56 129 aa11.32□□□□□ -0.6
PPP1CA-204ENST00000526510 PCP4P48539 62 aa11.3□□□□□ -0.6
PPP1CA-204ENST00000526510 MYCBP2O75592 4640 aa11.3□□□□□ -0.6
PPP1CA-204ENST00000526510 NDUFB1O75438 58 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms