RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 FP248Q71RG6 208 aaPredicted RBP5.57□□□□□ -1.52
PKP3-202ENST00000524646 PHF5AQ7RTV0 110 aaKnown RBP5.57□□□□□ -1.52
PKP3-202ENST00000524646 A0A0G2JQZ4 141 aa5.56□□□□□ -1.52
PKP3-202ENST00000524646 CHTF8P0CG12 524 aa5.56□□□□□ -1.52
PKP3-202ENST00000524646 NOTCH1P46531 2555 aa5.55□□□□□ -1.52
PKP3-202ENST00000524646 KRTAP11-1Q8IUC1 163 aa5.55□□□□□ -1.52
PKP3-202ENST00000524646 C9orf163Q8N9P6 203 aa5.55□□□□□ -1.52
PKP3-202ENST00000524646 B9D2Q9BPU9 175 aa5.55□□□□□ -1.52
PKP3-202ENST00000524646 DYNC2H1Q8NCM8 4307 aaKnown RBP5.53□□□□□ -1.52
PKP3-202ENST00000524646 LRCOL1A6NCL2 159 aa5.53□□□□□ -1.52
PKP3-202ENST00000524646 LINC00474Q9P2X8 69 aa5.53□□□□□ -1.52
PKP3-202ENST00000524646 NBDYA0A0U1RRE5 68 aa5.52□□□□□ -1.53
PKP3-202ENST00000524646 NUPR2A6NF83 97 aa5.52□□□□□ -1.53
PKP3-202ENST00000524646 KRTAP29-1A8MX34 341 aaPredicted RBP5.52□□□□□ -1.53
PKP3-202ENST00000524646 FAM229BQ4G0N7 80 aa5.52□□□□□ -1.53
PKP3-202ENST00000524646 WFDC13Q8IUB5 93 aa5.52□□□□□ -1.53
PKP3-202ENST00000524646 KRTAP13-1Q8IUC0 172 aa5.52□□□□□ -1.53
PKP3-202ENST00000524646 hDV103S1A0JD37 113 aa5.51□□□□□ -1.53
PKP3-202ENST00000524646 Q6ZRN7 208 aaPredicted RBP5.51□□□□□ -1.53
PKP3-202ENST00000524646 NBEAL1Q6ZS30 2694 aa5.5□□□□□ -1.53
PKP3-202ENST00000524646 A8MWP4 228 aa5.5□□□□□ -1.53
PKP3-202ENST00000524646 MP68P56378 58 aa5.5□□□□□ -1.53
PKP3-202ENST00000524646 DEFB116Q30KQ4 102 aa5.5□□□□□ -1.53
PKP3-202ENST00000524646 PRR15Q8IV56 129 aa5.5□□□□□ -1.53
PKP3-202ENST00000524646 CYP4F30PQ9H0H9 118 aa5.5□□□□□ -1.53
PKP3-202ENST00000524646 FBN1P35555 2871 aaKnown RBP5.5□□□□□ -1.53
PKP3-202ENST00000524646 DNAH9Q9NYC9 4486 aa5.49□□□□□ -1.53
PKP3-202ENST00000524646 NDUFB1O75438 58 aa5.49□□□□□ -1.53
PKP3-202ENST00000524646 CASC2Q6XLA1 102 aa5.49□□□□□ -1.53
PKP3-202ENST00000524646 SPACA4Q8TDM5 124 aa5.49□□□□□ -1.53
PKP3-202ENST00000524646 LINC00472Q9H8W2 130 aa5.49□□□□□ -1.53
PKP3-202ENST00000524646 H3BPC8 53 aa5.48□□□□□ -1.53
PKP3-202ENST00000524646 RPL37AP61513 92 aaKnown RBP5.48□□□□□ -1.53
PKP3-202ENST00000524646 TRAV22A0A0B4J277 110 aa5.47□□□□□ -1.53
PKP3-202ENST00000524646 PANO1I0J062 215 aa5.47□□□□□ -1.53
PKP3-202ENST00000524646 MDFIQ99750 246 aa5.47□□□□□ -1.53
PKP3-202ENST00000524646 H0Y9P7 68 aa5.46□□□□□ -1.54
PKP3-202ENST00000524646 LINC00336Q6ZUF6 198 aa5.46□□□□□ -1.54
PKP3-202ENST00000524646 PRO0628Q9UI54 55 aa5.46□□□□□ -1.54
PKP3-202ENST00000524646 DNAH10Q8IVF4 4471 aa5.46□□□□□ -1.54
PKP3-202ENST00000524646 STAB2Q8WWQ8 2551 aa5.46□□□□□ -1.54
PKP3-202ENST00000524646 MMP24-AS1A0A0U1RRL7 71 aa5.45□□□□□ -1.54
PKP3-202ENST00000524646 LINC00483Q53H64 154 aa5.45□□□□□ -1.54
PKP3-202ENST00000524646 C1orf64Q8NEQ6 169 aa5.45□□□□□ -1.54
PKP3-202ENST00000524646 MPLKIPQ8TAP9 179 aa5.45□□□□□ -1.54
PKP3-202ENST00000524646 ZNF706Q9Y5V0 76 aaPredicted RBP5.45□□□□□ -1.54
PKP3-202ENST00000524646 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.45□□□□□ -1.54
PKP3-202ENST00000524646 SPANXA2-OT1Q8N9U9 137 aa5.44□□□□□ -1.54
PKP3-202ENST00000524646 LINC00208Q96KT6 92 aa5.44□□□□□ -1.54
PKP3-202ENST00000524646 COL6A5A8TX70 2615 aa5.44□□□□□ -1.54
PKP3-202ENST00000524646 MOBPQ13875 183 aa5.43□□□□□ -1.54
PKP3-202ENST00000524646 A0A087WTM6 91 aa5.42□□□□□ -1.54
PKP3-202ENST00000524646 Q96NJ1 140 aa5.42□□□□□ -1.54
PKP3-202ENST00000524646 IGLV9-49A0A0B4J1Y8 123 aa5.41□□□□□ -1.54
PKP3-202ENST00000524646 Q1T7F1 81 aa5.41□□□□□ -1.54
PKP3-202ENST00000524646 MGAM2Q2M2H8 2515 aa5.4□□□□□ -1.54
PKP3-202ENST00000524646 RTL8CO15255 209 aa5.4□□□□□ -1.54
PKP3-202ENST00000524646 PRR4Q16378 134 aa5.4□□□□□ -1.54
PKP3-202ENST00000524646 ASB16-AS1Q495Z4 193 aa5.4□□□□□ -1.54
PKP3-202ENST00000524646 VPS13DQ5THJ4 4388 aa5.39□□□□□ -1.55
PKP3-202ENST00000524646 IGLV5-52A0A0A0MRZ9 124 aa5.39□□□□□ -1.55
PKP3-202ENST00000524646 WWC2-AS2Q96NR7 200 aa5.39□□□□□ -1.55
PKP3-202ENST00000524646 PLAC8Q9NZF1 115 aa5.39□□□□□ -1.55
PKP3-202ENST00000524646 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
PKP3-202ENST00000524646 C8orf17Q9NRJ1 99 aa5.38□□□□□ -1.55
PKP3-202ENST00000524646 DNAH17Q9UFH2 4485 aa5.38□□□□□ -1.55
PKP3-202ENST00000524646 A0A1B0GVX0 72 aa5.37□□□□□ -1.55
PKP3-202ENST00000524646 Q6ZR54 194 aa5.37□□□□□ -1.55
PKP3-202ENST00000524646 TP53AIP1Q9HCN2 124 aa5.37□□□□□ -1.55
PKP3-202ENST00000524646 PSORS1C2Q9UIG4 136 aa5.37□□□□□ -1.55
PKP3-202ENST00000524646 V9GYY9 64 aa5.36□□□□□ -1.55
PKP3-202ENST00000524646 PLECQ15149 4684 aaKnown RBP5.35□□□□□ -1.55
PKP3-202ENST00000524646 ZNF861PO60384 105 aa5.35□□□□□ -1.55
PKP3-202ENST00000524646 CDK2AP2O75956 126 aa5.35□□□□□ -1.55
PKP3-202ENST00000524646 COL7A1Q02388 2944 aa5.34□□□□□ -1.55
PKP3-202ENST00000524646 IGHV6-1A0A0B4J1U7 121 aa5.32□□□□□ -1.56
PKP3-202ENST00000524646 C1orf195Q5TG92 126 aa5.32□□□□□ -1.56
PKP3-202ENST00000524646 IGLV7-46A0A075B6I9 117 aa5.31□□□□□ -1.56
PKP3-202ENST00000524646 CD164Q04900 197 aa5.31□□□□□ -1.56
PKP3-202ENST00000524646 MRPL34Q9BQ48 92 aaKnown RBP5.31□□□□□ -1.56
PKP3-202ENST00000524646 IGLV7-43P04211 117 aa5.3□□□□□ -1.56
PKP3-202ENST00000524646 COA5Q86WW8 74 aa5.3□□□□□ -1.56
PKP3-202ENST00000524646 LYSTQ99698 3801 aa5.3□□□□□ -1.56
PKP3-202ENST00000524646 DNAH6Q9C0G6 4158 aa5.3□□□□□ -1.56
PKP3-202ENST00000524646 PSPHP1O15172 72 aa5.29□□□□□ -1.56
PKP3-202ENST00000524646 NDUFS5O43920 106 aa5.29□□□□□ -1.56
PKP3-202ENST00000524646 C1orf134Q5TEV5 83 aa5.29□□□□□ -1.56
PKP3-202ENST00000524646 LIMD2Q9BT23 127 aa5.29□□□□□ -1.56
PKP3-202ENST00000524646 DNAH7Q8WXX0 4024 aa5.28□□□□□ -1.56
PKP3-202ENST00000524646 STARD9Q9P2P6 4700 aa5.28□□□□□ -1.56
PKP3-202ENST00000524646 A8MUN3 132 aa5.28□□□□□ -1.56
PKP3-202ENST00000524646 PCOTHQ58A44 107 aa5.28□□□□□ -1.56
PKP3-202ENST00000524646 Q5VV11 94 aa5.27□□□□□ -1.57
PKP3-202ENST00000524646 Q8N9P0 234 aaPredicted RBP5.27□□□□□ -1.57
PKP3-202ENST00000524646 ANAPC11Q9NYG5 84 aa5.27□□□□□ -1.57
PKP3-202ENST00000524646 DNAH8Q96JB1 4490 aa5.27□□□□□ -1.57
PKP3-202ENST00000524646 CSMD3Q7Z407 3707 aa5.26□□□□□ -1.57
PKP3-202ENST00000524646 LOC101927531A0A1B0GV80 90 aa5.26□□□□□ -1.57
PKP3-202ENST00000524646 C8orf87E5RJ46 101 aa5.26□□□□□ -1.57
PKP3-202ENST00000524646 PRKDCP78527 4128 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms