RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 TCL1BO95988 128 aa6.31□□□□□ -1.4
CTNNA1-237ENST00000523275 SNRPEP62304 92 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-237ENST00000523275 VAMP3Q15836 100 aa6.31□□□□□ -1.4
CTNNA1-237ENST00000523275 F8WEM9 126 aa6.29□□□□□ -1.4
CTNNA1-237ENST00000523275 CFC1BP0CG36 223 aa6.29□□□□□ -1.4
CTNNA1-237ENST00000523275 RPL37P61927 97 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-237ENST00000523275 LINC00575Q6W349 94 aa6.28□□□□□ -1.4
CTNNA1-237ENST00000523275 CRCT1Q9UGL9 99 aa6.27□□□□□ -1.41
CTNNA1-237ENST00000523275 hADV29S1A0JD25 119 aa6.25□□□□□ -1.41
CTNNA1-237ENST00000523275 Q6JHZ5 121 aa6.25□□□□□ -1.41
CTNNA1-237ENST00000523275 Q6ZQY7 126 aa6.25□□□□□ -1.41
CTNNA1-237ENST00000523275 HSBP1L1C9JCN9 74 aa6.24□□□□□ -1.41
CTNNA1-237ENST00000523275 OCIAD2Q56VL3 154 aa6.24□□□□□ -1.41
CTNNA1-237ENST00000523275 COX6B2Q6YFQ2 88 aa6.23□□□□□ -1.41
CTNNA1-237ENST00000523275 HIST3H2BBQ8N257 126 aa6.23□□□□□ -1.41
CTNNA1-237ENST00000523275 CLEC2BQ92478 149 aa6.23□□□□□ -1.41
CTNNA1-237ENST00000523275 HIST1H2BLQ99880 126 aa6.23□□□□□ -1.41
CTNNA1-237ENST00000523275 TRBV7-7A0A0K0K1E9 115 aa6.22□□□□□ -1.41
CTNNA1-237ENST00000523275 M0R2T5 61 aa6.22□□□□□ -1.41
CTNNA1-237ENST00000523275 S100A2P29034 98 aa6.22□□□□□ -1.41
CTNNA1-237ENST00000523275 KRTAP10-6P60371 365 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-237ENST00000523275 IGFL1Q6UW32 110 aa6.22□□□□□ -1.41
CTNNA1-237ENST00000523275 FSIP2Q5CZC0 6907 aa6.22□□□□□ -1.41
CTNNA1-237ENST00000523275 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.21□□□□□ -1.42
CTNNA1-237ENST00000523275 SNHG12Q9BXW3 62 aa6.2□□□□□ -1.42
CTNNA1-237ENST00000523275 BVES-AS1Q5T3Y7 98 aa6.19□□□□□ -1.42
CTNNA1-237ENST00000523275 PPDPFLQ8WWR9 84 aa6.19□□□□□ -1.42
CTNNA1-237ENST00000523275 HIST1H4GQ99525 98 aa6.18□□□□□ -1.42
CTNNA1-237ENST00000523275 C12orf57Q99622 126 aa6.18□□□□□ -1.42
CTNNA1-237ENST00000523275 ATP11AUNQ6ZP68 121 aa6.17□□□□□ -1.42
CTNNA1-237ENST00000523275 OBSCN-AS1Q96MR7 158 aa6.17□□□□□ -1.42
CTNNA1-237ENST00000523275 H3BS24 57 aa6.16□□□□□ -1.42
CTNNA1-237ENST00000523275 SCGB1D1O95968 90 aa6.16□□□□□ -1.42
CTNNA1-237ENST00000523275 Q75L30 129 aa6.16□□□□□ -1.42
CTNNA1-237ENST00000523275 H3BUT2 72 aa6.15□□□□□ -1.42
CTNNA1-237ENST00000523275 LST1O00453 97 aa6.15□□□□□ -1.42
CTNNA1-237ENST00000523275 S100A6P06703 90 aa6.15□□□□□ -1.42
CTNNA1-237ENST00000523275 COX8AP10176 69 aa6.14□□□□□ -1.43
CTNNA1-237ENST00000523275 SNCGO76070 127 aa6.13□□□□□ -1.43
CTNNA1-237ENST00000523275 DLEU1O43261 78 aa6.12□□□□□ -1.43
CTNNA1-237ENST00000523275 Q6Q795 121 aa6.12□□□□□ -1.43
CTNNA1-237ENST00000523275 Q96NJ1 140 aa6.12□□□□□ -1.43
CTNNA1-237ENST00000523275 KRTAP4-8Q9BYQ9 185 aa6.12□□□□□ -1.43
CTNNA1-237ENST00000523275 SS18L2Q9UHA2 77 aa6.12□□□□□ -1.43
CTNNA1-237ENST00000523275 H0YGX0 51 aa6.11□□□□□ -1.43
CTNNA1-237ENST00000523275 CFC1P0CG37 223 aa6.11□□□□□ -1.43
CTNNA1-237ENST00000523275 RAB37Q96AX2 223 aa6.11□□□□□ -1.43
CTNNA1-237ENST00000523275 NDUFV3P56181 108 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-237ENST00000523275 TEN1Q86WV5 123 aa6.1□□□□□ -1.43
CTNNA1-237ENST00000523275 FLGP20930 4061 aaPredicted RBP6.09□□□□□ -1.44
CTNNA1-237ENST00000523275 S100A1P23297 94 aa6.08□□□□□ -1.44
CTNNA1-237ENST00000523275 C14orf144Q96I85 54 aa6.08□□□□□ -1.44
CTNNA1-237ENST00000523275 A0A0B4J2C4 111 aa6.07□□□□□ -1.44
CTNNA1-237ENST00000523275 FAM218AQ96MZ4 157 aa6.07□□□□□ -1.44
CTNNA1-237ENST00000523275 C20orf166-AS1Q96NR2 134 aa6.07□□□□□ -1.44
CTNNA1-237ENST00000523275 HIGD1BQ9P298 99 aa6.07□□□□□ -1.44
CTNNA1-237ENST00000523275 A0A087WSZ3 146 aa6.06□□□□□ -1.44
CTNNA1-237ENST00000523275 H3BMG7 143 aa6.06□□□□□ -1.44
CTNNA1-237ENST00000523275 A8MUU9 505 aa6.05□□□□□ -1.44
CTNNA1-237ENST00000523275 FABP2P12104 132 aa6.04□□□□□ -1.44
CTNNA1-237ENST00000523275 PAM16Q9Y3D7 125 aa6.04□□□□□ -1.44
CTNNA1-237ENST00000523275 A0A1B0GX51 115 aa6.03□□□□□ -1.44
CTNNA1-237ENST00000523275 SPATA45Q537H7 98 aa6.03□□□□□ -1.44
CTNNA1-237ENST00000523275 PRO1854Q9UHT4 67 aa6.03□□□□□ -1.44
CTNNA1-237ENST00000523275 TMA7Q9Y2S6 64 aaKnown RBP6.03□□□□□ -1.44
CTNNA1-237ENST00000523275 TRBV20-1A0A075B6N2 111 aa6.02□□□□□ -1.45
CTNNA1-237ENST00000523275 C2orf91Q6ZV80 131 aa6.02□□□□□ -1.45
CTNNA1-237ENST00000523275 CEND1Q8N111 149 aa6.02□□□□□ -1.45
CTNNA1-237ENST00000523275 DSCR10P59022 87 aa6.01□□□□□ -1.45
CTNNA1-237ENST00000523275 VAMP8Q9BV40 100 aa6.01□□□□□ -1.45
CTNNA1-237ENST00000523275 A0A1W2PNM2 257 aa6□□□□□ -1.45
CTNNA1-237ENST00000523275 KRTAP9-1A8MXZ3 250 aaPredicted RBP6□□□□□ -1.45
CTNNA1-237ENST00000523275 SIGMAR1Q99720 223 aa5.99□□□□□ -1.45
CTNNA1-237ENST00000523275 LINC00313P59037 77 aa5.98□□□□□ -1.45
CTNNA1-237ENST00000523275 TRIAP1O43715 76 aa5.97□□□□□ -1.45
CTNNA1-237ENST00000523275 FXYD2P54710 66 aa5.97□□□□□ -1.45
CTNNA1-237ENST00000523275 ANKRD29Q8N6D5 301 aa5.97□□□□□ -1.45
CTNNA1-237ENST00000523275 TRBV7-4A0A0J9YYF1 115 aa5.96□□□□□ -1.46
CTNNA1-237ENST00000523275 IGKV4-1P06312 121 aa5.96□□□□□ -1.46
CTNNA1-237ENST00000523275 KRTAP4-12Q9BQ66 201 aa5.96□□□□□ -1.46
CTNNA1-237ENST00000523275 KRTAP9-8Q9BYQ0 159 aa5.96□□□□□ -1.46
CTNNA1-237ENST00000523275 H3BQ85 93 aa5.95□□□□□ -1.46
CTNNA1-237ENST00000523275 DNAL4O96015 105 aa5.95□□□□□ -1.46
CTNNA1-237ENST00000523275 ORMDL1Q9P0S3 153 aa5.95□□□□□ -1.46
CTNNA1-237ENST00000523275 KRTAP16-1A8MUX0 517 aa5.94□□□□□ -1.46
CTNNA1-237ENST00000523275 KRTAP19-1Q8IUB9 90 aa5.94□□□□□ -1.46
CTNNA1-237ENST00000523275 A0A1B0GV72 72 aa5.93□□□□□ -1.46
CTNNA1-237ENST00000523275 TMEM256-PLSCR3K7ERE1 68 aa5.93□□□□□ -1.46
CTNNA1-237ENST00000523275 PSMB2P49721 201 aa5.93□□□□□ -1.46
CTNNA1-237ENST00000523275 FAM236DA0A1B0GTK5 79 aa5.92□□□□□ -1.46
CTNNA1-237ENST00000523275 FAM236CP0DP71 79 aa5.92□□□□□ -1.46
CTNNA1-237ENST00000523275 DEFB116Q30KQ4 102 aa5.92□□□□□ -1.46
CTNNA1-237ENST00000523275 NOTCH2NLQ7Z3S9 236 aa5.92□□□□□ -1.46
CTNNA1-237ENST00000523275 LINC00472Q9H8W2 130 aa5.92□□□□□ -1.46
CTNNA1-237ENST00000523275 CCKP06307 115 aa5.91□□□□□ -1.46
CTNNA1-237ENST00000523275 COX6CP09669 75 aa5.91□□□□□ -1.46
CTNNA1-237ENST00000523275 IGHV6-1A0A0B4J1U7 121 aa5.9□□□□□ -1.46
CTNNA1-237ENST00000523275 TRACP01848 142 aa5.9□□□□□ -1.46
CTNNA1-237ENST00000523275 HSD52Q0P140 79 aa5.9□□□□□ -1.46
CTNNA1-237ENST00000523275 K7ERJ3 54 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms