RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 LINC00158P58513 81 aa0.31□□□□□ -2.36
PTPN12-213ENST00000519553 C3P01024 1663 aa0.3□□□□□ -2.36
PTPN12-213ENST00000519553 LPAP08519 4548 aa0.3□□□□□ -2.36
PTPN12-213ENST00000519553 MAST4O15021 2626 aa0.3□□□□□ -2.36
PTPN12-213ENST00000519553 MYCBP2O75592 4640 aa0.3□□□□□ -2.36
PTPN12-213ENST00000519553 ETDCA0A1B0GVM5 59 aa0.3□□□□□ -2.36
PTPN12-213ENST00000519553 ALMS1Q8TCU4 4167 aa0.3□□□□□ -2.36
PTPN12-213ENST00000519553 ABCA6Q8N139 1617 aa0.3□□□□□ -2.36
PTPN12-213ENST00000519553 ABCC6O95255 1503 aa0.29□□□□□ -2.36
PTPN12-213ENST00000519553 TIAM1Q13009 1591 aa0.29□□□□□ -2.36
PTPN12-213ENST00000519553 WNK1Q9H4A3 2382 aa0.29□□□□□ -2.36
PTPN12-213ENST00000519553 SETXQ7Z333 2677 aaKnown RBP0.29□□□□□ -2.36
PTPN12-213ENST00000519553 DSPP15924 2871 aaKnown RBP0.28□□□□□ -2.36
PTPN12-213ENST00000519553 MAP1BP46821 2468 aaKnown RBP0.28□□□□□ -2.36
PTPN12-213ENST00000519553 LINC01549A6NIU2 74 aa0.28□□□□□ -2.36
PTPN12-213ENST00000519553 CRIP1P50238 77 aa0.28□□□□□ -2.36
PTPN12-213ENST00000519553 S100ZQ8WXG8 99 aa0.28□□□□□ -2.36
PTPN12-213ENST00000519553 DMBT1Q9UGM3 2413 aaPredicted RBP0.27□□□□□ -2.37
PTPN12-213ENST00000519553 M0R2T5 61 aa0.27□□□□□ -2.37
PTPN12-213ENST00000519553 LOC730098B7Z3J9 87 aa0.26□□□□□ -2.37
PTPN12-213ENST00000519553 SPRR2DP22532 72 aa0.26□□□□□ -2.37
PTPN12-213ENST00000519553 GLI2P10070 1586 aa0.26□□□□□ -2.37
PTPN12-213ENST00000519553 AKAP13Q12802 2813 aa0.26□□□□□ -2.37
PTPN12-213ENST00000519553 HECTD1Q9ULT8 2610 aa0.25□□□□□ -2.37
PTPN12-213ENST00000519553 APC2O95996 2303 aa0.25□□□□□ -2.37
PTPN12-213ENST00000519553 LY75O60449 1722 aa0.25□□□□□ -2.37
PTPN12-213ENST00000519553 SFTA3P0C7M3 94 aa0.25□□□□□ -2.37
PTPN12-213ENST00000519553 HECTD4Q9Y4D8 3996 aa0.25□□□□□ -2.37
PTPN12-213ENST00000519553 ALS2Q96Q42 1657 aa0.24□□□□□ -2.37
PTPN12-213ENST00000519553 ABCA10Q8WWZ4 1543 aa0.24□□□□□ -2.37
PTPN12-213ENST00000519553 KIAA0586Q9BVV6 1533 aa0.24□□□□□ -2.37
PTPN12-213ENST00000519553 PRRC2CQ9Y520 2896 aaKnown RBP0.24□□□□□ -2.37
PTPN12-213ENST00000519553 MAST1Q9Y2H9 1570 aa0.23□□□□□ -2.37
PTPN12-213ENST00000519553 ACANP16112 2415 aa0.23□□□□□ -2.37
PTPN12-213ENST00000519553 DCHS2Q6V1P9 2916 aa0.23□□□□□ -2.37
PTPN12-213ENST00000519553 DEFB135Q30KP9 77 aa0.23□□□□□ -2.37
PTPN12-213ENST00000519553 K7EMI3 77 aa0.22□□□□□ -2.37
PTPN12-213ENST00000519553 DEFB130BP0DP73 79 aa0.22□□□□□ -2.37
PTPN12-213ENST00000519553 DEFB130AP0DP74 79 aa0.22□□□□□ -2.37
PTPN12-213ENST00000519553 IAPPP10997 89 aa0.22□□□□□ -2.37
PTPN12-213ENST00000519553 SMIM5Q71RC9 77 aa0.22□□□□□ -2.37
PTPN12-213ENST00000519553 CREBBPQ92793 2442 aa0.22□□□□□ -2.37
PTPN12-213ENST00000519553 FLNCQ14315 2725 aa0.22□□□□□ -2.37
PTPN12-213ENST00000519553 HSPG2P98160 4391 aa0.21□□□□□ -2.38
PTPN12-213ENST00000519553 FLNAP21333 2647 aaKnown RBP0.21□□□□□ -2.38
PTPN12-213ENST00000519553 PCNX1Q96RV3 2341 aa0.21□□□□□ -2.38
PTPN12-213ENST00000519553 NBASA2RRP1 2371 aa0.2□□□□□ -2.38
PTPN12-213ENST00000519553 KIF1AQ12756 1690 aa0.2□□□□□ -2.38
PTPN12-213ENST00000519553 ITSN2Q9NZM3 1697 aa0.2□□□□□ -2.38
PTPN12-213ENST00000519553 COL7A1Q02388 2944 aa0.2□□□□□ -2.38
PTPN12-213ENST00000519553 FLNBO75369 2602 aaKnown RBP0.19□□□□□ -2.38
PTPN12-213ENST00000519553 HMCN2Q8NDA2 5059 aa0.19□□□□□ -2.38
PTPN12-213ENST00000519553 NSD1Q96L73 2696 aaPredicted RBP0.19□□□□□ -2.38
PTPN12-213ENST00000519553 SPRR2BP35325 72 aa0.19□□□□□ -2.38
PTPN12-213ENST00000519553 LYSTQ99698 3801 aa0.19□□□□□ -2.38
PTPN12-213ENST00000519553 TNRC18O15417 2968 aaPredicted RBP0.19□□□□□ -2.38
PTPN12-213ENST00000519553 PREX2Q70Z35 1606 aa0.19□□□□□ -2.38
PTPN12-213ENST00000519553 PRXQ9BXM0 1461 aa0.18□□□□□ -2.38
PTPN12-213ENST00000519553 CLASP1Q7Z460 1538 aa0.18□□□□□ -2.38
PTPN12-213ENST00000519553 SERF2P84101 59 aa0.17□□□□□ -2.38
PTPN12-213ENST00000519553 EEA1Q15075 1411 aa0.17□□□□□ -2.38
PTPN12-213ENST00000519553 COL6A3P12111 3177 aa0.17□□□□□ -2.38
PTPN12-213ENST00000519553 IGIPA6NJ69 53 aa0.16□□□□□ -2.38
PTPN12-213ENST00000519553 MINOS1Q5TGZ0 78 aa0.16□□□□□ -2.38
PTPN12-213ENST00000519553 NCBP2-AS2Q69YL0 99 aa0.16□□□□□ -2.38
PTPN12-213ENST00000519553 NMES1Q9C002 83 aa0.16□□□□□ -2.38
PTPN12-213ENST00000519553 CEP290O15078 2479 aa0.16□□□□□ -2.38
PTPN12-213ENST00000519553 CPS1P31327 1500 aa0.16□□□□□ -2.38
PTPN12-213ENST00000519553 TENM2Q9NT68 2774 aa0.16□□□□□ -2.38
PTPN12-213ENST00000519553 CROCC2H7BZ55 1655 aa0.15□□□□□ -2.39
PTPN12-213ENST00000519553 H0YGG7 62 aa0.15□□□□□ -2.39
PTPN12-213ENST00000519553 M0R1W7 72 aa0.15□□□□□ -2.39
PTPN12-213ENST00000519553 RPS27P42677 84 aaKnown RBP0.15□□□□□ -2.39
PTPN12-213ENST00000519553 PRLHP81277 87 aa0.15□□□□□ -2.39
PTPN12-213ENST00000519553 RPS27LQ71UM5 84 aaKnown RBP0.15□□□□□ -2.39
PTPN12-213ENST00000519553 PKD1P98161 4303 aa0.15□□□□□ -2.39
PTPN12-213ENST00000519553 NF1P21359 2839 aa0.14□□□□□ -2.39
PTPN12-213ENST00000519553 PKD1L2Q7Z442 2459 aa0.14□□□□□ -2.39
PTPN12-213ENST00000519553 UGGT1Q9NYU2 1555 aa0.14□□□□□ -2.39
PTPN12-213ENST00000519553 WT1-ASQ06250 92 aa0.13□□□□□ -2.39
PTPN12-213ENST00000519553 C6orf48Q9UBA6 75 aa0.13□□□□□ -2.39
PTPN12-213ENST00000519553 S4R3F8 94 aa0.13□□□□□ -2.39
PTPN12-213ENST00000519553 VPS13BQ7Z7G8 4022 aa0.13□□□□□ -2.39
PTPN12-213ENST00000519553 ZZEF1O43149 2961 aa0.13□□□□□ -2.39
PTPN12-213ENST00000519553 LRP2P98164 4655 aa0.13□□□□□ -2.39
PTPN12-213ENST00000519553 SYCP2Q9BX26 1530 aa0.13□□□□□ -2.39
PTPN12-213ENST00000519553 PKHD1P08F94 4074 aa0.13□□□□□ -2.39
PTPN12-213ENST00000519553 LRP1BQ9NZR2 4599 aa0.12□□□□□ -2.39
PTPN12-213ENST00000519553 FCER1GP30273 86 aa0.12□□□□□ -2.39
PTPN12-213ENST00000519553 CDC42BPAQ5VT25 1732 aa0.12□□□□□ -2.39
PTPN12-213ENST00000519553 TOGARAM1Q9Y4F4 1720 aa0.11□□□□□ -2.39
PTPN12-213ENST00000519553 FLGP20930 4061 aaPredicted RBP0.1□□□□□ -2.39
PTPN12-213ENST00000519553 ADCY10Q96PN6 1610 aa0.1□□□□□ -2.39
PTPN12-213ENST00000519553 MAP1AP78559 2803 aaPredicted RBP0.1□□□□□ -2.39
PTPN12-213ENST00000519553 CUBNO60494 3623 aa0.09□□□□□ -2.39
PTPN12-213ENST00000519553 ZANQ9Y493 2812 aa0.09□□□□□ -2.39
PTPN12-213ENST00000519553 GPR98Q8WXG9 6306 aa0.09□□□□□ -2.39
PTPN12-213ENST00000519553 ANKRD36CQ5JPF3 1778 aa0.09□□□□□ -2.39
PTPN12-213ENST00000519553 MROH2AA6NES4 1674 aa0.09□□□□□ -2.39
PTPN12-213ENST00000519553 DEFB106AQ8N104 65 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms