RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 KRTAP19-6Q3LI70 58 aa6.18□□□□□ -1.42
TRAPPC9-204ENST00000518723 IGFL1Q6UW32 110 aa6.17□□□□□ -1.42
TRAPPC9-204ENST00000518723 A6NDN8 102 aa6.16□□□□□ -1.42
TRAPPC9-204ENST00000518723 TRGC2P03986 189 aa6.16□□□□□ -1.42
TRAPPC9-204ENST00000518723 NDUFA5Q16718 116 aa6.16□□□□□ -1.42
TRAPPC9-204ENST00000518723 COPS9Q8WXC6 57 aa6.15□□□□□ -1.42
TRAPPC9-204ENST00000518723 TRAV13-2A0A0B4J235 113 aa6.14□□□□□ -1.43
TRAPPC9-204ENST00000518723 LST1O00453 97 aa6.14□□□□□ -1.43
TRAPPC9-204ENST00000518723 KRTAP6-3Q3LI67 103 aa6.14□□□□□ -1.43
TRAPPC9-204ENST00000518723 TTTY13Q9BZ97 58 aa6.14□□□□□ -1.43
TRAPPC9-204ENST00000518723 FAM236DA0A1B0GTK5 79 aa6.13□□□□□ -1.43
TRAPPC9-204ENST00000518723 FAM236CP0DP71 79 aa6.13□□□□□ -1.43
TRAPPC9-204ENST00000518723 IFITM1P13164 125 aa6.13□□□□□ -1.43
TRAPPC9-204ENST00000518723 SYS1-DBNDD2H3BUS1 97 aa6.12□□□□□ -1.43
TRAPPC9-204ENST00000518723 OCIAD2Q56VL3 154 aa6.12□□□□□ -1.43
TRAPPC9-204ENST00000518723 SMIM11BQ8TCY0 68 aa6.12□□□□□ -1.43
TRAPPC9-204ENST00000518723 MPLKIPQ8TAP9 179 aa6.11□□□□□ -1.43
TRAPPC9-204ENST00000518723 LINC01545Q5VT33 79 aa6.1□□□□□ -1.43
TRAPPC9-204ENST00000518723 LINC00575Q6W349 94 aa6.1□□□□□ -1.43
TRAPPC9-204ENST00000518723 Q6ZQY7 126 aa6.1□□□□□ -1.43
TRAPPC9-204ENST00000518723 Q6ZVH6 145 aa6.1□□□□□ -1.43
TRAPPC9-204ENST00000518723 SLC7A5P1Q8MH63 180 aa6.1□□□□□ -1.43
TRAPPC9-204ENST00000518723 SCGB1D4Q6XE38 83 aa6.09□□□□□ -1.43
TRAPPC9-204ENST00000518723 VAMP3Q15836 100 aa6.08□□□□□ -1.44
TRAPPC9-204ENST00000518723 RBM12B-AS1Q9P1G2 102 aa6.08□□□□□ -1.44
TRAPPC9-204ENST00000518723 hADV29S1A0JD25 119 aa6.07□□□□□ -1.44
TRAPPC9-204ENST00000518723 KRTAP16-1A8MUX0 517 aa6.07□□□□□ -1.44
TRAPPC9-204ENST00000518723 MUSTN1Q8IVN3 82 aa6.07□□□□□ -1.44
TRAPPC9-204ENST00000518723 SS18L2Q9UHA2 77 aa6.07□□□□□ -1.44
TRAPPC9-204ENST00000518723 HRES1P13985 223 aa6.06□□□□□ -1.44
TRAPPC9-204ENST00000518723 PET117Q6UWS5 81 aa6.06□□□□□ -1.44
TRAPPC9-204ENST00000518723 NEBP20929 6669 aa6.05□□□□□ -1.44
TRAPPC9-204ENST00000518723 S100A1P23297 94 aa6.05□□□□□ -1.44
TRAPPC9-204ENST00000518723 PPDPFLQ8WWR9 84 aa6.05□□□□□ -1.44
TRAPPC9-204ENST00000518723 SCGB1D1O95968 90 aa6.04□□□□□ -1.44
TRAPPC9-204ENST00000518723 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC9-204ENST00000518723 H3BUT2 72 aa6.02□□□□□ -1.45
TRAPPC9-204ENST00000518723 DSCR10P59022 87 aa6.02□□□□□ -1.45
TRAPPC9-204ENST00000518723 SNHG12Q9BXW3 62 aa6.01□□□□□ -1.45
TRAPPC9-204ENST00000518723 NOTCH2NLQ7Z3S9 236 aa6□□□□□ -1.45
TRAPPC9-204ENST00000518723 ANKRD39Q53RE8 183 aa5.99□□□□□ -1.45
TRAPPC9-204ENST00000518723 TEN1Q86WV5 123 aa5.99□□□□□ -1.45
TRAPPC9-204ENST00000518723 C3orf79P0CE67 100 aa5.98□□□□□ -1.45
TRAPPC9-204ENST00000518723 A0A087WSZ3 146 aa5.97□□□□□ -1.45
TRAPPC9-204ENST00000518723 COLCA2A8K830 154 aa5.97□□□□□ -1.45
TRAPPC9-204ENST00000518723 LINC00313P59037 77 aa5.97□□□□□ -1.45
TRAPPC9-204ENST00000518723 MTURNQ8N3F0 131 aa5.96□□□□□ -1.46
TRAPPC9-204ENST00000518723 HIST1H2BKO60814 126 aa5.94□□□□□ -1.46
TRAPPC9-204ENST00000518723 HIST1H2BJP06899 126 aa5.94□□□□□ -1.46
TRAPPC9-204ENST00000518723 HIST1H2BOP23527 126 aa5.94□□□□□ -1.46
TRAPPC9-204ENST00000518723 HIST1H2BBP33778 126 aa5.94□□□□□ -1.46
TRAPPC9-204ENST00000518723 HIST1H2BDP58876 126 aa5.94□□□□□ -1.46
TRAPPC9-204ENST00000518723 HIST1H2BCP62807 126 aa5.94□□□□□ -1.46
TRAPPC9-204ENST00000518723 HIST2H2BEQ16778 126 aa5.94□□□□□ -1.46
TRAPPC9-204ENST00000518723 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.94□□□□□ -1.46
TRAPPC9-204ENST00000518723 HIST1H2BHQ93079 126 aa5.94□□□□□ -1.46
TRAPPC9-204ENST00000518723 SIGMAR1Q99720 223 aa5.94□□□□□ -1.46
TRAPPC9-204ENST00000518723 HIST1H2BNQ99877 126 aa5.94□□□□□ -1.46
TRAPPC9-204ENST00000518723 HIST1H2BMQ99879 126 aa5.94□□□□□ -1.46
TRAPPC9-204ENST00000518723 MUC12Q9UKN1 5478 aa5.93□□□□□ -1.46
TRAPPC9-204ENST00000518723 A8MWP4 228 aa5.93□□□□□ -1.46
TRAPPC9-204ENST00000518723 BVES-AS1Q5T3Y7 98 aa5.93□□□□□ -1.46
TRAPPC9-204ENST00000518723 KRTDAPP60985 99 aa5.92□□□□□ -1.46
TRAPPC9-204ENST00000518723 ATOH7Q8N100 152 aa5.9□□□□□ -1.46
TRAPPC9-204ENST00000518723 C12orf57Q99622 126 aa5.9□□□□□ -1.46
TRAPPC9-204ENST00000518723 GHRHP01286 108 aa5.89□□□□□ -1.47
TRAPPC9-204ENST00000518723 NDUFV3P56181 108 aaKnown RBP5.89□□□□□ -1.47
TRAPPC9-204ENST00000518723 Q8N9P0 234 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC9-204ENST00000518723 IGKV4-1P06312 121 aa5.88□□□□□ -1.47
TRAPPC9-204ENST00000518723 A0A1W2PNM2 257 aa5.86□□□□□ -1.47
TRAPPC9-204ENST00000518723 SNRPEP62304 92 aaKnown RBP5.86□□□□□ -1.47
TRAPPC9-204ENST00000518723 H3BMG7 143 aa5.85□□□□□ -1.47
TRAPPC9-204ENST00000518723 KRTAP20-1Q3LI63 56 aa5.85□□□□□ -1.47
TRAPPC9-204ENST00000518723 COA6Q5JTJ3 125 aaKnown RBP5.85□□□□□ -1.47
TRAPPC9-204ENST00000518723 SNCGO76070 127 aa5.84□□□□□ -1.47
TRAPPC9-204ENST00000518723 SPINK7P58062 85 aa5.84□□□□□ -1.47
TRAPPC9-204ENST00000518723 ZCCHC13Q8WW36 166 aaKnown RBP5.82□□□□□ -1.48
TRAPPC9-204ENST00000518723 IGHV6-1A0A0B4J1U7 121 aa5.81□□□□□ -1.48
TRAPPC9-204ENST00000518723 TRBV7-4A0A0J9YYF1 115 aa5.81□□□□□ -1.48
TRAPPC9-204ENST00000518723 TMEM238LA0A1B0GVL6 79 aa5.81□□□□□ -1.48
TRAPPC9-204ENST00000518723 H0YGX0 51 aa5.81□□□□□ -1.48
TRAPPC9-204ENST00000518723 LINC00472Q9H8W2 130 aa5.81□□□□□ -1.48
TRAPPC9-204ENST00000518723 FAM218AQ96MZ4 157 aa5.8□□□□□ -1.48
TRAPPC9-204ENST00000518723 C8orf87E5RJ46 101 aa5.79□□□□□ -1.48
TRAPPC9-204ENST00000518723 DEFB116Q30KQ4 102 aa5.79□□□□□ -1.48
TRAPPC9-204ENST00000518723 FABP2P12104 132 aa5.78□□□□□ -1.48
TRAPPC9-204ENST00000518723 RAB37Q96AX2 223 aa5.78□□□□□ -1.48
TRAPPC9-204ENST00000518723 WFDC13Q8IUB5 93 aa5.77□□□□□ -1.49
TRAPPC9-204ENST00000518723 A0A1B0GX51 115 aa5.76□□□□□ -1.49
TRAPPC9-204ENST00000518723 ANKRD29Q8N6D5 301 aa5.76□□□□□ -1.49
TRAPPC9-204ENST00000518723 HIST1H4GQ99525 98 aa5.76□□□□□ -1.49
TRAPPC9-204ENST00000518723 MDN1Q9NU22 5596 aa5.75□□□□□ -1.49
TRAPPC9-204ENST00000518723 A0A1B0GVX0 72 aa5.75□□□□□ -1.49
TRAPPC9-204ENST00000518723 HSBP1L1C9JCN9 74 aa5.74□□□□□ -1.49
TRAPPC9-204ENST00000518723 KMT2DO14686 5537 aa5.73□□□□□ -1.49
TRAPPC9-204ENST00000518723 LOC105371267A0A1B0GV96 52 aa5.72□□□□□ -1.49
TRAPPC9-204ENST00000518723 A6NN06 94 aa5.72□□□□□ -1.49
TRAPPC9-204ENST00000518723 A0A0B4J2C4 111 aa5.71□□□□□ -1.5
TRAPPC9-204ENST00000518723 TRACP01848 142 aa5.71□□□□□ -1.5
TRAPPC9-204ENST00000518723 CCKP06307 115 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms