RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 IGKV2-28A0A075B6P5 120 aa1.89□□□□□ -2.11
SCARNA13-201ENST00000516672 IGKV2D-24A0A075B6R9 120 aa1.89□□□□□ -2.11
SCARNA13-201ENST00000516672 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.89□□□□□ -2.11
SCARNA13-201ENST00000516672 LINC00959A0A1B0GUT2 108 aa1.89□□□□□ -2.11
SCARNA13-201ENST00000516672 hADV29S1A0JD25 119 aa1.89□□□□□ -2.11
SCARNA13-201ENST00000516672 IGKV2-29A2NJV5 120 aaPredicted RBP1.89□□□□□ -2.11
SCARNA13-201ENST00000516672 SMIM1B2RUZ4 78 aa1.89□□□□□ -2.11
SCARNA13-201ENST00000516672 ATOX1O00244 68 aa1.89□□□□□ -2.11
SCARNA13-201ENST00000516672 IGKV2D-28P01615 120 aa1.89□□□□□ -2.11
SCARNA13-201ENST00000516672 TMEM258P61165 79 aa1.89□□□□□ -2.11
SCARNA13-201ENST00000516672 RPL18AQ02543 176 aaKnown RBP1.89□□□□□ -2.11
SCARNA13-201ENST00000516672 SPINK6Q6UWN8 80 aa1.89□□□□□ -2.11
SCARNA13-201ENST00000516672 Q8N3U1 123 aa1.89□□□□□ -2.11
SCARNA13-201ENST00000516672 CHCHD10Q8WYQ3 142 aaPredicted RBP1.89□□□□□ -2.11
SCARNA13-201ENST00000516672 LINC00167Q96N53 147 aa1.89□□□□□ -2.11
SCARNA13-201ENST00000516672 Q9HAA7 133 aa1.89□□□□□ -2.11
SCARNA13-201ENST00000516672 A0A087WZ39 114 aa1.88□□□□□ -2.11
SCARNA13-201ENST00000516672 GVQW2A0A096LPI5 108 aaPredicted RBP1.88□□□□□ -2.11
SCARNA13-201ENST00000516672 IGHV3OR16-9A0A0B4J2B5 98 aa1.88□□□□□ -2.11
SCARNA13-201ENST00000516672 USP17L23D6RBM5 183 aa1.88□□□□□ -2.11
SCARNA13-201ENST00000516672 PRSS2P07478 247 aa1.88□□□□□ -2.11
SCARNA13-201ENST00000516672 COX6CP09669 75 aa1.88□□□□□ -2.11
SCARNA13-201ENST00000516672 BAALC-AS2P0C853 105 aa1.88□□□□□ -2.11
SCARNA13-201ENST00000516672 RPL28P46779 137 aaKnown RBP1.88□□□□□ -2.11
SCARNA13-201ENST00000516672 LINC00242Q5T6M2 205 aa1.88□□□□□ -2.11
SCARNA13-201ENST00000516672 GAGE2AQ6NT46 116 aa1.88□□□□□ -2.11
SCARNA13-201ENST00000516672 LINC00337Q8N6G1 96 aa1.88□□□□□ -2.11
SCARNA13-201ENST00000516672 SERP2Q8N6R1 65 aa1.88□□□□□ -2.11
SCARNA13-201ENST00000516672 DPH3Q96FX2 82 aa1.88□□□□□ -2.11
SCARNA13-201ENST00000516672 RETNLBQ9BQ08 111 aa1.88□□□□□ -2.11
SCARNA13-201ENST00000516672 LINC00474Q9P2X8 69 aa1.88□□□□□ -2.11
SCARNA13-201ENST00000516672 A0A087WVE0 104 aa1.87□□□□□ -2.11
SCARNA13-201ENST00000516672 A0A087WYN8 130 aa1.87□□□□□ -2.11
SCARNA13-201ENST00000516672 TRAV13-1A0A0B4J241 112 aa1.87□□□□□ -2.11
SCARNA13-201ENST00000516672 IGKV3D-7A0A0C4DH55 119 aa1.87□□□□□ -2.11
SCARNA13-201ENST00000516672 MT2AP02795 61 aa1.87□□□□□ -2.11
SCARNA13-201ENST00000516672 MALP21145 153 aa1.87□□□□□ -2.11
SCARNA13-201ENST00000516672 MT4P47944 62 aa1.87□□□□□ -2.11
SCARNA13-201ENST00000516672 XCL1P47992 114 aa1.87□□□□□ -2.11
SCARNA13-201ENST00000516672 SEC61BP60468 96 aaKnown RBP1.87□□□□□ -2.11
SCARNA13-201ENST00000516672 PRR26Q8N8Z3 221 aa1.87□□□□□ -2.11
SCARNA13-201ENST00000516672 C9orf163Q8N9P6 203 aa1.87□□□□□ -2.11
SCARNA13-201ENST00000516672 OR13C6PQ8NH95 151 aa1.87□□□□□ -2.11
SCARNA13-201ENST00000516672 DSCR8Q96T75 97 aa1.87□□□□□ -2.11
SCARNA13-201ENST00000516672 IGLV10-54A0A075B6I4 117 aa1.86□□□□□ -2.11
SCARNA13-201ENST00000516672 NDUFC2-KCTD14E9PQ53 114 aa1.86□□□□□ -2.11
SCARNA13-201ENST00000516672 ZNF561-AS1K7EIQ3 104 aa1.86□□□□□ -2.11
SCARNA13-201ENST00000516672 SYCNQ0VAF6 134 aa1.86□□□□□ -2.11
SCARNA13-201ENST00000516672 C4orf26Q17RF5 130 aa1.86□□□□□ -2.11
SCARNA13-201ENST00000516672 CLPSL2Q6UWE3 100 aa1.86□□□□□ -2.11
SCARNA13-201ENST00000516672 C15orf56Q8N910 161 aa1.86□□□□□ -2.11
SCARNA13-201ENST00000516672 SMIM11BQ8TCY0 68 aa1.86□□□□□ -2.11
SCARNA13-201ENST00000516672 C14orf132Q9NPU4 83 aa1.86□□□□□ -2.11
SCARNA13-201ENST00000516672 TRAV13-2A0A0B4J235 113 aa1.85□□□□□ -2.11
SCARNA13-201ENST00000516672 IGKV3OR2-268A0A0C4DH90 116 aa1.85□□□□□ -2.11
SCARNA13-201ENST00000516672 A0A0U1RRA0 63 aa1.85□□□□□ -2.11
SCARNA13-201ENST00000516672 NCR3O14931 201 aa1.85□□□□□ -2.11
SCARNA13-201ENST00000516672 LECT2O14960 151 aa1.85□□□□□ -2.11
SCARNA13-201ENST00000516672 SLPIP03973 132 aa1.85□□□□□ -2.11
SCARNA13-201ENST00000516672 MT1FP04733 61 aa1.85□□□□□ -2.11
SCARNA13-201ENST00000516672 CCKP06307 115 aa1.85□□□□□ -2.11
SCARNA13-201ENST00000516672 TLX1NBP0CAT3 122 aa1.85□□□□□ -2.11
SCARNA13-201ENST00000516672 PRR3P79522 188 aaKnown RBP1.85□□□□□ -2.11
SCARNA13-201ENST00000516672 KIAA0087Q14695 138 aa1.85□□□□□ -2.11
SCARNA13-201ENST00000516672 C6orf226Q5I0X4 101 aa1.85□□□□□ -2.11
SCARNA13-201ENST00000516672 ATP5EP2Q5VTU8 51 aa1.85□□□□□ -2.11
SCARNA13-201ENST00000516672 HRCT1Q6UXD1 115 aa1.85□□□□□ -2.11
SCARNA13-201ENST00000516672 Q8IZM0 81 aa1.85□□□□□ -2.11
SCARNA13-201ENST00000516672 MIR7-3HGQ8N6C7 128 aa1.85□□□□□ -2.11
SCARNA13-201ENST00000516672 COPS9Q8WXC6 57 aa1.85□□□□□ -2.11
SCARNA13-201ENST00000516672 CAMK2N2Q96S95 79 aa1.85□□□□□ -2.11
SCARNA13-201ENST00000516672 H7BZZ5 65 aa1.84□□□□□ -2.11
SCARNA13-201ENST00000516672 NDUFC2O95298 119 aa1.84□□□□□ -2.11
SCARNA13-201ENST00000516672 DNAL4O96015 105 aa1.84□□□□□ -2.11
SCARNA13-201ENST00000516672 GHRHP01286 108 aa1.84□□□□□ -2.11
SCARNA13-201ENST00000516672 SPAG11BQ08648 103 aa1.84□□□□□ -2.11
SCARNA13-201ENST00000516672 COX17Q14061 63 aa1.84□□□□□ -2.11
SCARNA13-201ENST00000516672 COX6B2Q6YFQ2 88 aa1.84□□□□□ -2.11
SCARNA13-201ENST00000516672 FP248Q71RG6 208 aaPredicted RBP1.84□□□□□ -2.11
SCARNA13-201ENST00000516672 FAM19A1Q7Z5A9 133 aa1.84□□□□□ -2.11
SCARNA13-201ENST00000516672 Q8NDZ9 215 aa1.84□□□□□ -2.11
SCARNA13-201ENST00000516672 COX7B2Q8TF08 81 aa1.84□□□□□ -2.11
SCARNA13-201ENST00000516672 SND1-IT1Q9HBX3 110 aa1.84□□□□□ -2.11
SCARNA13-201ENST00000516672 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.84□□□□□ -2.11
SCARNA13-201ENST00000516672 TRAV7A0A075B6U4 112 aa1.83□□□□□ -2.12
SCARNA13-201ENST00000516672 TRBV10-3A0A0K0K1G6 114 aa1.83□□□□□ -2.12
SCARNA13-201ENST00000516672 FAM236DA0A1B0GTK5 79 aa1.83□□□□□ -2.12
SCARNA13-201ENST00000516672 H0YGX0 51 aa1.83□□□□□ -2.12
SCARNA13-201ENST00000516672 BCE1O60756 84 aa1.83□□□□□ -2.12
SCARNA13-201ENST00000516672 FAM236CP0DP71 79 aa1.83□□□□□ -2.12
SCARNA13-201ENST00000516672 KLKP1Q107X0 134 aa1.83□□□□□ -2.12
SCARNA13-201ENST00000516672 HIGD2BQ4VC39 106 aa1.83□□□□□ -2.12
SCARNA13-201ENST00000516672 KRTAP5-4Q6L8H1 288 aa1.83□□□□□ -2.12
SCARNA13-201ENST00000516672 Q6ZQT0 140 aa1.83□□□□□ -2.12
SCARNA13-201ENST00000516672 SPACA4Q8TDM5 124 aa1.83□□□□□ -2.12
SCARNA13-201ENST00000516672 PLAC8Q9NZF1 115 aa1.83□□□□□ -2.12
SCARNA13-201ENST00000516672 SERP1Q9Y6X1 66 aa1.83□□□□□ -2.12
SCARNA13-201ENST00000516672 TRAV23DV6A0A075B6W5 121 aa1.82□□□□□ -2.12
SCARNA13-201ENST00000516672 LOC110117498A0A087WWA1 95 aa1.82□□□□□ -2.12
SCARNA13-201ENST00000516672 PFN2P35080 140 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms