RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 C21orf62-AS1Q17RA5 79 aa4.66□□□□□ -1.66
SCARNA20.1-201ENST00000516009 C3orf22Q8N5N4 141 aa4.66□□□□□ -1.66
SCARNA20.1-201ENST00000516009 SRRM2Q9UQ35 2752 aaKnown RBP4.65□□□□□ -1.66
SCARNA20.1-201ENST00000516009 APOBP04114 4563 aaKnown RBP4.65□□□□□ -1.66
SCARNA20.1-201ENST00000516009 TRBV7-4A0A0J9YYF1 115 aa4.65□□□□□ -1.67
SCARNA20.1-201ENST00000516009 Q6ZQT0 140 aa4.65□□□□□ -1.67
SCARNA20.1-201ENST00000516009 SMIM29Q86T20 159 aa4.65□□□□□ -1.67
SCARNA20.1-201ENST00000516009 SPRR4Q96PI1 79 aa4.65□□□□□ -1.67
SCARNA20.1-201ENST00000516009 XGP55808 180 aa4.63□□□□□ -1.67
SCARNA20.1-201ENST00000516009 CDIP1Q9H305 208 aa4.63□□□□□ -1.67
SCARNA20.1-201ENST00000516009 LINC00483Q53H64 154 aa4.62□□□□□ -1.67
SCARNA20.1-201ENST00000516009 IGLV8-61A0A075B6I0 122 aa4.61□□□□□ -1.67
SCARNA20.1-201ENST00000516009 RPL37AP61513 92 aaKnown RBP4.61□□□□□ -1.67
SCARNA20.1-201ENST00000516009 SMR3BP02814 79 aaPredicted RBP4.6□□□□□ -1.67
SCARNA20.1-201ENST00000516009 Q6JHZ5 121 aa4.6□□□□□ -1.67
SCARNA20.1-201ENST00000516009 LINC00846Q9NV44 126 aa4.6□□□□□ -1.67
SCARNA20.1-201ENST00000516009 IGLV9-49A0A0B4J1Y8 123 aa4.59□□□□□ -1.67
SCARNA20.1-201ENST00000516009 A0A1B0GW54 56 aa4.59□□□□□ -1.67
SCARNA20.1-201ENST00000516009 A0A1W2PNM2 257 aa4.59□□□□□ -1.67
SCARNA20.1-201ENST00000516009 C9orf153Q5TBE3 101 aa4.59□□□□□ -1.67
SCARNA20.1-201ENST00000516009 IGFL1Q6UW32 110 aa4.59□□□□□ -1.67
SCARNA20.1-201ENST00000516009 Q8NBF4 154 aa4.59□□□□□ -1.67
SCARNA20.1-201ENST00000516009 VPS13BQ7Z7G8 4022 aa4.59□□□□□ -1.68
SCARNA20.1-201ENST00000516009 LINC00643Q86TS7 51 aa4.58□□□□□ -1.68
SCARNA20.1-201ENST00000516009 SIGMAR1Q99720 223 aa4.58□□□□□ -1.68
SCARNA20.1-201ENST00000516009 UBL5Q9BZL1 73 aa4.58□□□□□ -1.68
SCARNA20.1-201ENST00000516009 FAT1Q14517 4588 aa4.57□□□□□ -1.68
SCARNA20.1-201ENST00000516009 ANAPC11Q9NYG5 84 aa4.57□□□□□ -1.68
SCARNA20.1-201ENST00000516009 A0A0G2JQZ4 141 aa4.56□□□□□ -1.68
SCARNA20.1-201ENST00000516009 MT-ATP8P03928 68 aa4.56□□□□□ -1.68
SCARNA20.1-201ENST00000516009 CRYGAP11844 174 aa4.56□□□□□ -1.68
SCARNA20.1-201ENST00000516009 MOBPQ13875 183 aa4.56□□□□□ -1.68
SCARNA20.1-201ENST00000516009 FAM229BQ4G0N7 80 aa4.56□□□□□ -1.68
SCARNA20.1-201ENST00000516009 SPINK6Q6UWN8 80 aa4.56□□□□□ -1.68
SCARNA20.1-201ENST00000516009 CDK2AP2O75956 126 aa4.55□□□□□ -1.68
SCARNA20.1-201ENST00000516009 Q6ZVQ6 151 aa4.55□□□□□ -1.68
SCARNA20.1-201ENST00000516009 FAM229AH3BQW9 127 aa4.54□□□□□ -1.68
SCARNA20.1-201ENST00000516009 ATP5EP2Q5VTU8 51 aa4.54□□□□□ -1.68
SCARNA20.1-201ENST00000516009 Q6Q795 121 aa4.54□□□□□ -1.68
SCARNA20.1-201ENST00000516009 IGKV3D-7A0A0C4DH55 119 aa4.53□□□□□ -1.68
SCARNA20.1-201ENST00000516009 TRBV7-7A0A0K0K1E9 115 aa4.53□□□□□ -1.68
SCARNA20.1-201ENST00000516009 PLA2G1BP04054 148 aaKnown RBP4.53□□□□□ -1.68
SCARNA20.1-201ENST00000516009 KRTAP1-4P0C5Y4 121 aa4.53□□□□□ -1.68
SCARNA20.1-201ENST00000516009 KRTAP10-4P60372 401 aaPredicted RBP4.53□□□□□ -1.68
SCARNA20.1-201ENST00000516009 NREPQ16612 68 aa4.53□□□□□ -1.68
SCARNA20.1-201ENST00000516009 A0A087WSZ3 146 aa4.52□□□□□ -1.69
SCARNA20.1-201ENST00000516009 A0A087X002 238 aa4.52□□□□□ -1.69
SCARNA20.1-201ENST00000516009 SSBP3-AS1Q7Z2R9 100 aa4.52□□□□□ -1.69
SCARNA20.1-201ENST00000516009 HSPG2P98160 4391 aa4.52□□□□□ -1.69
SCARNA20.1-201ENST00000516009 RYR1P21817 5038 aa4.52□□□□□ -1.69
SCARNA20.1-201ENST00000516009 CXCL6P80162 114 aa4.51□□□□□ -1.69
SCARNA20.1-201ENST00000516009 IMUPQ9GZP8 106 aa4.51□□□□□ -1.69
SCARNA20.1-201ENST00000516009 PKHD1L1Q86WI1 4243 aa4.5□□□□□ -1.69
SCARNA20.1-201ENST00000516009 EPPK1P58107 5090 aaKnown RBP4.5□□□□□ -1.69
SCARNA20.1-201ENST00000516009 KRTAP13-2Q52LG2 175 aa4.5□□□□□ -1.69
SCARNA20.1-201ENST00000516009 HRCT1Q6UXD1 115 aa4.5□□□□□ -1.69
SCARNA20.1-201ENST00000516009 BPY2O14599 106 aa4.49□□□□□ -1.69
SCARNA20.1-201ENST00000516009 CD164Q04900 197 aa4.49□□□□□ -1.69
SCARNA20.1-201ENST00000516009 Q5VSD8 79 aa4.49□□□□□ -1.69
SCARNA20.1-201ENST00000516009 SS18L2Q9UHA2 77 aa4.49□□□□□ -1.69
SCARNA20.1-201ENST00000516009 HIST1H4AP62805 103 aaKnown RBP4.48□□□□□ -1.69
SCARNA20.1-201ENST00000516009 TYMSOSQ8TAI1 123 aa4.48□□□□□ -1.69
SCARNA20.1-201ENST00000516009 SCGB1A1P11684 91 aa4.47□□□□□ -1.69
SCARNA20.1-201ENST00000516009 PRR26Q8N8Z3 221 aa4.47□□□□□ -1.69
SCARNA20.1-201ENST00000516009 KIAA1109Q2LD37 5005 aa4.47□□□□□ -1.69
SCARNA20.1-201ENST00000516009 DEFB116Q30KQ4 102 aa4.45□□□□□ -1.7
SCARNA20.1-201ENST00000516009 C4orf48Q5BLP8 95 aa4.45□□□□□ -1.7
SCARNA20.1-201ENST00000516009 LINC00472Q9H8W2 130 aa4.45□□□□□ -1.7
SCARNA20.1-201ENST00000516009 A0A087WVE0 104 aa4.44□□□□□ -1.7
SCARNA20.1-201ENST00000516009 J3KT08 172 aa4.44□□□□□ -1.7
SCARNA20.1-201ENST00000516009 DSCR10P59022 87 aa4.44□□□□□ -1.7
SCARNA20.1-201ENST00000516009 Q8N1X5 172 aa4.44□□□□□ -1.7
SCARNA20.1-201ENST00000516009 Q8N9L7 120 aa4.44□□□□□ -1.7
SCARNA20.1-201ENST00000516009 FAM236AA0A1B0GUQ0 79 aa4.43□□□□□ -1.7
SCARNA20.1-201ENST00000516009 FAM236BA0A1B0GV22 79 aa4.43□□□□□ -1.7
SCARNA20.1-201ENST00000516009 IGKV4-1P06312 121 aa4.43□□□□□ -1.7
SCARNA20.1-201ENST00000516009 SPAG11AQ6PDA7 123 aa4.43□□□□□ -1.7
SCARNA20.1-201ENST00000516009 LINC00304Q8N9R0 145 aa4.43□□□□□ -1.7
SCARNA20.1-201ENST00000516009 LIMD2Q9BT23 127 aa4.43□□□□□ -1.7
SCARNA20.1-201ENST00000516009 SPINK1P00995 79 aa4.42□□□□□ -1.7
SCARNA20.1-201ENST00000516009 ASB16-AS1Q495Z4 193 aa4.42□□□□□ -1.7
SCARNA20.1-201ENST00000516009 Q5XG85 94 aa4.42□□□□□ -1.7
SCARNA20.1-201ENST00000516009 Q96NJ1 140 aa4.42□□□□□ -1.7
SCARNA20.1-201ENST00000516009 A8MWP4 228 aa4.41□□□□□ -1.7
SCARNA20.1-201ENST00000516009 K7EQZ3 153 aa4.41□□□□□ -1.7
SCARNA20.1-201ENST00000516009 NDUFB1O75438 58 aa4.41□□□□□ -1.7
SCARNA20.1-201ENST00000516009 KRTAP17-1Q9BYP8 105 aa4.41□□□□□ -1.7
SCARNA20.1-201ENST00000516009 RPS29P62273 56 aaKnown RBP4.4□□□□□ -1.71
SCARNA20.1-201ENST00000516009 FAT3Q8TDW7 4589 aa4.39□□□□□ -1.71
SCARNA20.1-201ENST00000516009 ATOX1O00244 68 aa4.39□□□□□ -1.71
SCARNA20.1-201ENST00000516009 PRR15Q8IV56 129 aa4.39□□□□□ -1.71
SCARNA20.1-201ENST00000516009 LRP1Q07954 4544 aaKnown RBP4.38□□□□□ -1.71
SCARNA20.1-201ENST00000516009 HCG22E2RYF7 251 aa4.37□□□□□ -1.71
SCARNA20.1-201ENST00000516009 PCP4P48539 62 aa4.37□□□□□ -1.71
SCARNA20.1-201ENST00000516009 C1orf195Q5TG92 126 aa4.37□□□□□ -1.71
SCARNA20.1-201ENST00000516009 ANAPC13Q9BS18 74 aa4.37□□□□□ -1.71
SCARNA20.1-201ENST00000516009 BIRC6Q9NR09 4857 aa4.36□□□□□ -1.71
SCARNA20.1-201ENST00000516009 A0A1B0GVX0 72 aa4.36□□□□□ -1.71
SCARNA20.1-201ENST00000516009 KRTAP10-8P60410 259 aa4.36□□□□□ -1.71
SCARNA20.1-201ENST00000516009 IGHV6-1A0A0B4J1U7 121 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms