RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 SIGMAR1Q99720 223 aa5.76□□□□□ -1.49
TPM3-222ENST00000515609 C9orf153Q5TBE3 101 aa5.75□□□□□ -1.49
TPM3-222ENST00000515609 C3orf22Q8N5N4 141 aa5.75□□□□□ -1.49
TPM3-222ENST00000515609 Q8NBF4 154 aa5.75□□□□□ -1.49
TPM3-222ENST00000515609 DNAH10Q8IVF4 4471 aa5.74□□□□□ -1.49
TPM3-222ENST00000515609 CRYGAP11844 174 aa5.74□□□□□ -1.49
TPM3-222ENST00000515609 XGP55808 180 aa5.74□□□□□ -1.49
TPM3-222ENST00000515609 Q6Q795 121 aa5.74□□□□□ -1.49
TPM3-222ENST00000515609 SSBP3-AS1Q7Z2R9 100 aa5.74□□□□□ -1.49
TPM3-222ENST00000515609 NREPQ16612 68 aa5.73□□□□□ -1.49
TPM3-222ENST00000515609 IMUPQ9GZP8 106 aa5.73□□□□□ -1.49
TPM3-222ENST00000515609 CDIP1Q9H305 208 aa5.73□□□□□ -1.49
TPM3-222ENST00000515609 IGLV9-49A0A0B4J1Y8 123 aa5.72□□□□□ -1.49
TPM3-222ENST00000515609 IGFL1Q6UW32 110 aa5.72□□□□□ -1.49
TPM3-222ENST00000515609 LINC00846Q9NV44 126 aa5.72□□□□□ -1.49
TPM3-222ENST00000515609 SS18L2Q9UHA2 77 aa5.72□□□□□ -1.49
TPM3-222ENST00000515609 DNAH17Q9UFH2 4485 aa5.72□□□□□ -1.49
TPM3-222ENST00000515609 HAMPP81172 84 aa5.71□□□□□ -1.5
TPM3-222ENST00000515609 CD164Q04900 197 aa5.71□□□□□ -1.5
TPM3-222ENST00000515609 TRBV7-7A0A0K0K1E9 115 aa5.7□□□□□ -1.5
TPM3-222ENST00000515609 A0A1W2PNM2 257 aa5.69□□□□□ -1.5
TPM3-222ENST00000515609 CXCL6P80162 114 aa5.69□□□□□ -1.5
TPM3-222ENST00000515609 MOBPQ13875 183 aa5.69□□□□□ -1.5
TPM3-222ENST00000515609 DNAH2Q9P225 4427 aa5.68□□□□□ -1.5
TPM3-222ENST00000515609 SMR3BP02814 79 aaPredicted RBP5.68□□□□□ -1.5
TPM3-222ENST00000515609 Q6ZVQ6 151 aa5.68□□□□□ -1.5
TPM3-222ENST00000515609 SCGB1A1P11684 91 aa5.67□□□□□ -1.5
TPM3-222ENST00000515609 C4orf48Q5BLP8 95 aa5.67□□□□□ -1.5
TPM3-222ENST00000515609 J3KT08 172 aa5.66□□□□□ -1.5
TPM3-222ENST00000515609 BPY2O14599 106 aa5.66□□□□□ -1.5
TPM3-222ENST00000515609 A0A087WSZ3 146 aa5.65□□□□□ -1.5
TPM3-222ENST00000515609 MT-ATP8P03928 68 aa5.64□□□□□ -1.51
TPM3-222ENST00000515609 SPAG11AQ6PDA7 123 aa5.64□□□□□ -1.51
TPM3-222ENST00000515609 FRAS1Q86XX4 4008 aa5.63□□□□□ -1.51
TPM3-222ENST00000515609 TYMSOSQ8TAI1 123 aa5.63□□□□□ -1.51
TPM3-222ENST00000515609 LIMD2Q9BT23 127 aa5.63□□□□□ -1.51
TPM3-222ENST00000515609 KRTAP1-4P0C5Y4 121 aa5.62□□□□□ -1.51
TPM3-222ENST00000515609 ANAPC11Q9NYG5 84 aa5.62□□□□□ -1.51
TPM3-222ENST00000515609 HYDINQ4G0P3 5121 aa5.62□□□□□ -1.51
TPM3-222ENST00000515609 HECTD4Q9Y4D8 3996 aa5.61□□□□□ -1.51
TPM3-222ENST00000515609 NDUFB1O75438 58 aa5.61□□□□□ -1.51
TPM3-222ENST00000515609 SPINK1P00995 79 aa5.61□□□□□ -1.51
TPM3-222ENST00000515609 HIST1H4AP62805 103 aaKnown RBP5.61□□□□□ -1.51
TPM3-222ENST00000515609 SACSQ9NZJ4 4579 aa5.61□□□□□ -1.51
TPM3-222ENST00000515609 FAT2Q9NYQ8 4349 aa5.6□□□□□ -1.51
TPM3-222ENST00000515609 IGKV3D-7A0A0C4DH55 119 aa5.6□□□□□ -1.51
TPM3-222ENST00000515609 RPS29P62273 56 aaKnown RBP5.6□□□□□ -1.51
TPM3-222ENST00000515609 Q5VSD8 79 aa5.6□□□□□ -1.51
TPM3-222ENST00000515609 Q5XG85 94 aa5.6□□□□□ -1.51
TPM3-222ENST00000515609 PKD1P98161 4303 aa5.6□□□□□ -1.51
TPM3-222ENST00000515609 A0A087X002 238 aa5.59□□□□□ -1.51
TPM3-222ENST00000515609 ASB16-AS1Q495Z4 193 aa5.59□□□□□ -1.51
TPM3-222ENST00000515609 KRTAP10-4P60372 401 aaPredicted RBP5.58□□□□□ -1.52
TPM3-222ENST00000515609 Q8N1X5 172 aa5.58□□□□□ -1.52
TPM3-222ENST00000515609 A0A0G2JQZ4 141 aa5.57□□□□□ -1.52
TPM3-222ENST00000515609 KRTAP13-2Q52LG2 175 aa5.57□□□□□ -1.52
TPM3-222ENST00000515609 HRCT1Q6UXD1 115 aa5.57□□□□□ -1.52
TPM3-222ENST00000515609 RYR2Q92736 4967 aa5.56□□□□□ -1.52
TPM3-222ENST00000515609 SMIM20Q8N5G0 67 aa5.56□□□□□ -1.52
TPM3-222ENST00000515609 LINC00304Q8N9R0 145 aa5.56□□□□□ -1.52
TPM3-222ENST00000515609 LINC00472Q9H8W2 130 aa5.56□□□□□ -1.52
TPM3-222ENST00000515609 A8MWP4 228 aa5.55□□□□□ -1.52
TPM3-222ENST00000515609 DNAH11Q96DT5 4516 aa5.55□□□□□ -1.52
TPM3-222ENST00000515609 ATOX1O00244 68 aa5.54□□□□□ -1.52
TPM3-222ENST00000515609 IGKV4-1P06312 121 aa5.54□□□□□ -1.52
TPM3-222ENST00000515609 PRR26Q8N8Z3 221 aa5.54□□□□□ -1.52
TPM3-222ENST00000515609 SRRM2Q9UQ35 2752 aaKnown RBP5.54□□□□□ -1.52
TPM3-222ENST00000515609 FAM236AA0A1B0GUQ0 79 aa5.53□□□□□ -1.52
TPM3-222ENST00000515609 FAM236BA0A1B0GV22 79 aa5.53□□□□□ -1.52
TPM3-222ENST00000515609 KMT2CQ8NEZ4 4911 aaKnown RBP5.53□□□□□ -1.52
TPM3-222ENST00000515609 DSCR10P59022 87 aa5.51□□□□□ -1.53
TPM3-222ENST00000515609 PRR15Q8IV56 129 aa5.51□□□□□ -1.53
TPM3-222ENST00000515609 RYR3Q15413 4870 aa5.51□□□□□ -1.53
TPM3-222ENST00000515609 ANAPC13Q9BS18 74 aa5.5□□□□□ -1.53
TPM3-222ENST00000515609 DNAH5Q8TE73 4624 aa5.5□□□□□ -1.53
TPM3-222ENST00000515609 DNAH8Q96JB1 4490 aa5.49□□□□□ -1.53
TPM3-222ENST00000515609 HCG22E2RYF7 251 aa5.49□□□□□ -1.53
TPM3-222ENST00000515609 K7EQZ3 153 aa5.49□□□□□ -1.53
TPM3-222ENST00000515609 A0A087WVE0 104 aa5.48□□□□□ -1.53
TPM3-222ENST00000515609 A0A1B0GVX0 72 aa5.48□□□□□ -1.53
TPM3-222ENST00000515609 C8orf87E5RJ46 101 aa5.48□□□□□ -1.53
TPM3-222ENST00000515609 OXTP01178 125 aa5.48□□□□□ -1.53
TPM3-222ENST00000515609 DEFB116Q30KQ4 102 aa5.48□□□□□ -1.53
TPM3-222ENST00000515609 Q96NJ1 140 aa5.48□□□□□ -1.53
TPM3-222ENST00000515609 PKHD1P08F94 4074 aa5.48□□□□□ -1.53
TPM3-222ENST00000515609 Q8N9L7 120 aa5.47□□□□□ -1.53
TPM3-222ENST00000515609 PCP4P48539 62 aa5.46□□□□□ -1.54
TPM3-222ENST00000515609 C1orf195Q5TG92 126 aa5.46□□□□□ -1.54
TPM3-222ENST00000515609 CASC2Q6XLA1 102 aa5.46□□□□□ -1.54
TPM3-222ENST00000515609 SERP2Q8N6R1 65 aa5.45□□□□□ -1.54
TPM3-222ENST00000515609 IGHV6-1A0A0B4J1U7 121 aa5.44□□□□□ -1.54
TPM3-222ENST00000515609 KRTAP10-8P60410 259 aa5.44□□□□□ -1.54
TPM3-222ENST00000515609 LRP1BQ9NZR2 4599 aa5.44□□□□□ -1.54
TPM3-222ENST00000515609 TRAV7A0A075B6U4 112 aa5.43□□□□□ -1.54
TPM3-222ENST00000515609 hDV103S1A0JD37 113 aa5.43□□□□□ -1.54
TPM3-222ENST00000515609 TP53AIP1Q9HCN2 124 aa5.43□□□□□ -1.54
TPM3-222ENST00000515609 C8orf17Q9NRJ1 99 aa5.43□□□□□ -1.54
TPM3-222ENST00000515609 LINC00313P59037 77 aa5.42□□□□□ -1.54
TPM3-222ENST00000515609 DYNC1H1Q14204 4646 aaKnown RBP5.42□□□□□ -1.54
TPM3-222ENST00000515609 UQCRQO14949 82 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms