RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 Q8NDZ9 215 aa3.84□□□□□ -1.79
NPHP3-211ENST00000515289 LINC00526Q96FQ7 95 aa3.84□□□□□ -1.79
NPHP3-211ENST00000515289 HIGD2AQ9BW72 106 aa3.84□□□□□ -1.79
NPHP3-211ENST00000515289 C6orf48Q9UBA6 75 aa3.84□□□□□ -1.79
NPHP3-211ENST00000515289 DNAH1Q9P2D7 4330 aa3.84□□□□□ -1.8
NPHP3-211ENST00000515289 TRAV13-2A0A0B4J235 113 aa3.83□□□□□ -1.8
NPHP3-211ENST00000515289 LRCOL1A6NCL2 159 aa3.83□□□□□ -1.8
NPHP3-211ENST00000515289 F8W1H4 67 aa3.83□□□□□ -1.8
NPHP3-211ENST00000515289 M0R378 163 aa3.83□□□□□ -1.8
NPHP3-211ENST00000515289 COX17Q14061 63 aa3.83□□□□□ -1.8
NPHP3-211ENST00000515289 OCIAD2Q56VL3 154 aa3.83□□□□□ -1.8
NPHP3-211ENST00000515289 LINC01600Q96MT4 127 aa3.83□□□□□ -1.8
NPHP3-211ENST00000515289 H3BT86 120 aa3.82□□□□□ -1.8
NPHP3-211ENST00000515289 RPL28P46779 137 aaKnown RBP3.82□□□□□ -1.8
NPHP3-211ENST00000515289 ATXN8Q156A1 80 aa3.82□□□□□ -1.8
NPHP3-211ENST00000515289 CLEC2BQ92478 149 aa3.82□□□□□ -1.8
NPHP3-211ENST00000515289 CARD19Q96LW7 228 aa3.82□□□□□ -1.8
NPHP3-211ENST00000515289 APLNQ9ULZ1 77 aa3.82□□□□□ -1.8
NPHP3-211ENST00000515289 STAB2Q8WWQ8 2551 aa3.81□□□□□ -1.8
NPHP3-211ENST00000515289 TRBV10-2A0A0K0K1G8 114 aa3.8□□□□□ -1.8
NPHP3-211ENST00000515289 A0A1B0GX51 115 aa3.8□□□□□ -1.8
NPHP3-211ENST00000515289 C9JAW5 83 aa3.8□□□□□ -1.8
NPHP3-211ENST00000515289 J3KT08 172 aa3.8□□□□□ -1.8
NPHP3-211ENST00000515289 KRTAP21-3Q3LHN1 58 aa3.8□□□□□ -1.8
NPHP3-211ENST00000515289 ETDBQ3ZM63 59 aa3.8□□□□□ -1.8
NPHP3-211ENST00000515289 SMIM11BQ8TCY0 68 aa3.8□□□□□ -1.8
NPHP3-211ENST00000515289 COX6CP09669 75 aa3.79□□□□□ -1.8
NPHP3-211ENST00000515289 HRES1P13985 223 aa3.79□□□□□ -1.8
NPHP3-211ENST00000515289 TEN1Q86WV5 123 aa3.79□□□□□ -1.8
NPHP3-211ENST00000515289 PRR15Q8IV56 129 aa3.79□□□□□ -1.8
NPHP3-211ENST00000515289 TMEM126AQ9H061 195 aa3.79□□□□□ -1.8
NPHP3-211ENST00000515289 PRKDCP78527 4128 aaKnown RBP3.78□□□□□ -1.8
NPHP3-211ENST00000515289 PLECQ15149 4684 aaKnown RBP3.78□□□□□ -1.8
NPHP3-211ENST00000515289 TRAV7A0A075B6U4 112 aa3.78□□□□□ -1.8
NPHP3-211ENST00000515289 K7ERU9 68 aa3.78□□□□□ -1.8
NPHP3-211ENST00000515289 NCR3O14931 201 aa3.78□□□□□ -1.8
NPHP3-211ENST00000515289 TRACP01848 142 aa3.78□□□□□ -1.8
NPHP3-211ENST00000515289 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
NPHP3-211ENST00000515289 C22orf24Q9Y442 160 aa3.78□□□□□ -1.8
NPHP3-211ENST00000515289 NUPR2A6NF83 97 aa3.77□□□□□ -1.81
NPHP3-211ENST00000515289 IGLV6-57P01721 117 aa3.77□□□□□ -1.81
NPHP3-211ENST00000515289 UBE2BP63146 152 aa3.77□□□□□ -1.81
NPHP3-211ENST00000515289 PPDPFLQ8WWR9 84 aa3.77□□□□□ -1.81
NPHP3-211ENST00000515289 TMEM256-PLSCR3K7ERE1 68 aa3.76□□□□□ -1.81
NPHP3-211ENST00000515289 HRCT1Q6UXD1 115 aa3.76□□□□□ -1.81
NPHP3-211ENST00000515289 LINC00167Q96N53 147 aa3.76□□□□□ -1.81
NPHP3-211ENST00000515289 STARD9Q9P2P6 4700 aa3.76□□□□□ -1.81
NPHP3-211ENST00000515289 VPS13DQ5THJ4 4388 aa3.76□□□□□ -1.81
NPHP3-211ENST00000515289 DNAH7Q8WXX0 4024 aa3.75□□□□□ -1.81
NPHP3-211ENST00000515289 H0YGX0 51 aa3.75□□□□□ -1.81
NPHP3-211ENST00000515289 KRTAP13-2Q52LG2 175 aa3.75□□□□□ -1.81
NPHP3-211ENST00000515289 UBE2DNLQ8IWF7 75 aa3.75□□□□□ -1.81
NPHP3-211ENST00000515289 TRBV10-3A0A0K0K1G6 114 aa3.74□□□□□ -1.81
NPHP3-211ENST00000515289 A0A1B0GVY2 172 aa3.74□□□□□ -1.81
NPHP3-211ENST00000515289 C3orf84H3BNL1 204 aa3.74□□□□□ -1.81
NPHP3-211ENST00000515289 COL7A1Q02388 2944 aa3.74□□□□□ -1.81
NPHP3-211ENST00000515289 Q6ZRN7 208 aaPredicted RBP3.74□□□□□ -1.81
NPHP3-211ENST00000515289 NBDYA0A0U1RRE5 68 aa3.73□□□□□ -1.81
NPHP3-211ENST00000515289 TEX49A0A1B0GTD5 131 aa3.73□□□□□ -1.81
NPHP3-211ENST00000515289 A0A1W2PNM2 257 aa3.73□□□□□ -1.81
NPHP3-211ENST00000515289 BAALC-AS2P0C853 105 aa3.73□□□□□ -1.81
NPHP3-211ENST00000515289 S100A7L2Q5SY68 101 aa3.73□□□□□ -1.81
NPHP3-211ENST00000515289 PSORS1C2Q9UIG4 136 aa3.73□□□□□ -1.81
NPHP3-211ENST00000515289 MEGF8Q7Z7M0 2845 aa3.72□□□□□ -1.81
NPHP3-211ENST00000515289 TRAV23DV6A0A075B6W5 121 aa3.72□□□□□ -1.81
NPHP3-211ENST00000515289 J3QR89 54 aa3.72□□□□□ -1.81
NPHP3-211ENST00000515289 RTL8CO15255 209 aa3.72□□□□□ -1.81
NPHP3-211ENST00000515289 CNBPP62633 177 aaKnown RBP3.72□□□□□ -1.81
NPHP3-211ENST00000515289 LINC00575Q6W349 94 aa3.72□□□□□ -1.81
NPHP3-211ENST00000515289 VPS25Q9BRG1 176 aa3.72□□□□□ -1.81
NPHP3-211ENST00000515289 DNAH10Q8IVF4 4471 aa3.72□□□□□ -1.81
NPHP3-211ENST00000515289 FUSP35637 526 aaKnown RBP eCLIP3.71□□□□□ -1.82
NPHP3-211ENST00000515289 PHF5AQ7RTV0 110 aaKnown RBP3.71□□□□□ -1.82
NPHP3-211ENST00000515289 Q8N814 137 aa3.71□□□□□ -1.82
NPHP3-211ENST00000515289 DIRC1Q969H9 104 aa3.71□□□□□ -1.82
NPHP3-211ENST00000515289 OBSCN-AS1Q96MR7 158 aa3.71□□□□□ -1.82
NPHP3-211ENST00000515289 FBN3Q75N90 2809 aa3.7□□□□□ -1.82
NPHP3-211ENST00000515289 CSMD3Q7Z407 3707 aa3.7□□□□□ -1.82
NPHP3-211ENST00000515289 TRBV7-6A0A0J9YX20 115 aa3.7□□□□□ -1.82
NPHP3-211ENST00000515289 LOC107984640A0A0U1RRK4 108 aa3.7□□□□□ -1.82
NPHP3-211ENST00000515289 DNAL4O96015 105 aa3.7□□□□□ -1.82
NPHP3-211ENST00000515289 ELOF1P60002 83 aaKnown RBP3.7□□□□□ -1.82
NPHP3-211ENST00000515289 KCNQ1DNQ9H478 68 aa3.7□□□□□ -1.82
NPHP3-211ENST00000515289 A0A096LNI7 61 aa3.69□□□□□ -1.82
NPHP3-211ENST00000515289 COX7BP24311 80 aa3.69□□□□□ -1.82
NPHP3-211ENST00000515289 ORMDL1Q9P0S3 153 aa3.69□□□□□ -1.82
NPHP3-211ENST00000515289 DNAH6Q9C0G6 4158 aa3.69□□□□□ -1.82
NPHP3-211ENST00000515289 hADV29S1A0JD25 119 aa3.68□□□□□ -1.82
NPHP3-211ENST00000515289 SPRR1AP35321 89 aa3.68□□□□□ -1.82
NPHP3-211ENST00000515289 DNAH17Q9UFH2 4485 aa3.68□□□□□ -1.82
NPHP3-211ENST00000515289 ALMS1Q8TCU4 4167 aa3.67□□□□□ -1.82
NPHP3-211ENST00000515289 LYSTQ99698 3801 aa3.67□□□□□ -1.82
NPHP3-211ENST00000515289 A0A1W2PNN7 141 aa3.67□□□□□ -1.82
NPHP3-211ENST00000515289 C9orf163Q8N9P6 203 aa3.67□□□□□ -1.82
NPHP3-211ENST00000515289 M0R2N4 97 aa3.66□□□□□ -1.82
NPHP3-211ENST00000515289 MT-ATP8P03928 68 aa3.66□□□□□ -1.82
NPHP3-211ENST00000515289 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.66□□□□□ -1.82
NPHP3-211ENST00000515289 Q6ZQY7 126 aa3.66□□□□□ -1.82
NPHP3-211ENST00000515289 DNAH2Q9P225 4427 aa3.65□□□□□ -1.82
NPHP3-211ENST00000515289 A0A087WTM6 91 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms