RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 A0A1W2PNM2 257 aa4.86□□□□□ -1.63
PDLIM5-219ENST00000514743 SPART-AS1P0CW21 52 aa4.86□□□□□ -1.63
PDLIM5-219ENST00000514743 KRTAP10-11P60412 298 aa4.86□□□□□ -1.63
PDLIM5-219ENST00000514743 Q8NDZ9 215 aa4.86□□□□□ -1.63
PDLIM5-219ENST00000514743 LELP1Q5T871 98 aa4.85□□□□□ -1.63
PDLIM5-219ENST00000514743 PRR34Q9NV39 138 aa4.85□□□□□ -1.63
PDLIM5-219ENST00000514743 MAST4O15021 2626 aa4.85□□□□□ -1.63
PDLIM5-219ENST00000514743 SPAG11AQ6PDA7 123 aa4.85□□□□□ -1.63
PDLIM5-219ENST00000514743 Q6ZR54 194 aa4.85□□□□□ -1.63
PDLIM5-219ENST00000514743 TENM3Q9P273 2699 aa4.85□□□□□ -1.63
PDLIM5-219ENST00000514743 COA5Q86WW8 74 aa4.84□□□□□ -1.63
PDLIM5-219ENST00000514743 LINC01558Q9Y6Z2 57 aa4.84□□□□□ -1.63
PDLIM5-219ENST00000514743 HUWE1Q7Z6Z7 4374 aaKnown RBP4.84□□□□□ -1.63
PDLIM5-219ENST00000514743 COX17Q14061 63 aa4.84□□□□□ -1.63
PDLIM5-219ENST00000514743 RTL8CO15255 209 aa4.83□□□□□ -1.64
PDLIM5-219ENST00000514743 UNQ6190/PRO20217Q6UXQ8 127 aa4.83□□□□□ -1.64
PDLIM5-219ENST00000514743 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.83□□□□□ -1.64
PDLIM5-219ENST00000514743 SPANXA2-OT1Q8N9U9 137 aa4.82□□□□□ -1.64
PDLIM5-219ENST00000514743 EGFEM1PQ0D2K5 195 aa4.82□□□□□ -1.64
PDLIM5-219ENST00000514743 KLK12Q9UKR0 248 aa4.82□□□□□ -1.64
PDLIM5-219ENST00000514743 KRTAP24-1Q3LI83 254 aa4.81□□□□□ -1.64
PDLIM5-219ENST00000514743 LINC00575Q6W349 94 aa4.81□□□□□ -1.64
PDLIM5-219ENST00000514743 LYSTQ99698 3801 aa4.81□□□□□ -1.64
PDLIM5-219ENST00000514743 A0A0J9YWU9 116 aa4.81□□□□□ -1.64
PDLIM5-219ENST00000514743 KRTAP26-1Q6PEX3 210 aa4.81□□□□□ -1.64
PDLIM5-219ENST00000514743 WFDC10BQ8IUB3 73 aa4.81□□□□□ -1.64
PDLIM5-219ENST00000514743 COX7BP24311 80 aa4.8□□□□□ -1.64
PDLIM5-219ENST00000514743 MIR22HGQ0VDD5 57 aa4.8□□□□□ -1.64
PDLIM5-219ENST00000514743 Q6ZQY7 126 aa4.8□□□□□ -1.64
PDLIM5-219ENST00000514743 XAGE1AQ9HD64 81 aa4.8□□□□□ -1.64
PDLIM5-219ENST00000514743 A0A087X002 238 aa4.8□□□□□ -1.64
PDLIM5-219ENST00000514743 CYSRT1A8MQ03 144 aa4.8□□□□□ -1.64
PDLIM5-219ENST00000514743 H3BNG1 76 aa4.8□□□□□ -1.64
PDLIM5-219ENST00000514743 REG3GQ6UW15 175 aa4.8□□□□□ -1.64
PDLIM5-219ENST00000514743 F8P00451 2351 aa4.79□□□□□ -1.64
PDLIM5-219ENST00000514743 KRTAP16-1A8MUX0 517 aa4.79□□□□□ -1.64
PDLIM5-219ENST00000514743 KPRPQ5T749 579 aaPredicted RBP4.79□□□□□ -1.64
PDLIM5-219ENST00000514743 STAB1Q9NY15 2570 aa4.79□□□□□ -1.64
PDLIM5-219ENST00000514743 DNAH9Q9NYC9 4486 aa4.78□□□□□ -1.64
PDLIM5-219ENST00000514743 GVQW2A0A096LPI5 108 aaPredicted RBP4.78□□□□□ -1.64
PDLIM5-219ENST00000514743 H3BQ85 93 aa4.78□□□□□ -1.64
PDLIM5-219ENST00000514743 PLAC8Q9NZF1 115 aa4.78□□□□□ -1.64
PDLIM5-219ENST00000514743 C6orf48Q9UBA6 75 aa4.78□□□□□ -1.64
PDLIM5-219ENST00000514743 H0Y9P7 68 aa4.78□□□□□ -1.64
PDLIM5-219ENST00000514743 DNAH10Q8IVF4 4471 aa4.78□□□□□ -1.64
PDLIM5-219ENST00000514743 IGLV6-57P01721 117 aa4.76□□□□□ -1.65
PDLIM5-219ENST00000514743 NOTCH2NLQ7Z3S9 236 aa4.76□□□□□ -1.65
PDLIM5-219ENST00000514743 C15orf56Q8N910 161 aa4.76□□□□□ -1.65
PDLIM5-219ENST00000514743 KCNQ1DNQ9H478 68 aa4.76□□□□□ -1.65
PDLIM5-219ENST00000514743 CNBPP62633 177 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-219ENST00000514743 DYNC2H1Q8NCM8 4307 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-219ENST00000514743 COL7A1Q02388 2944 aa4.73□□□□□ -1.65
PDLIM5-219ENST00000514743 DNAH7Q8WXX0 4024 aa4.73□□□□□ -1.65
PDLIM5-219ENST00000514743 P0C880 135 aa4.73□□□□□ -1.65
PDLIM5-219ENST00000514743 LINC01556Q5JQF7 62 aa4.73□□□□□ -1.65
PDLIM5-219ENST00000514743 DEFB131BA0A096LNP1 70 aa4.73□□□□□ -1.65
PDLIM5-219ENST00000514743 NOTCH1P46531 2555 aa4.73□□□□□ -1.65
PDLIM5-219ENST00000514743 CAMK2N2Q96S95 79 aa4.72□□□□□ -1.65
PDLIM5-219ENST00000514743 NBEAL1Q6ZS30 2694 aa4.72□□□□□ -1.65
PDLIM5-219ENST00000514743 CSMD3Q7Z407 3707 aa4.71□□□□□ -1.65
PDLIM5-219ENST00000514743 CDK2AP2O75956 126 aa4.7□□□□□ -1.66
PDLIM5-219ENST00000514743 DNAH10OSP0CZ25 163 aa4.7□□□□□ -1.66
PDLIM5-219ENST00000514743 DEFB116Q30KQ4 102 aa4.7□□□□□ -1.66
PDLIM5-219ENST00000514743 A0A1B0GW54 56 aa4.69□□□□□ -1.66
PDLIM5-219ENST00000514743 H3BPC8 53 aa4.69□□□□□ -1.66
PDLIM5-219ENST00000514743 K7EQZ3 153 aa4.69□□□□□ -1.66
PDLIM5-219ENST00000514743 LORP23490 312 aaPredicted RBP4.69□□□□□ -1.66
PDLIM5-219ENST00000514743 PLECQ15149 4684 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-219ENST00000514743 IGKV2D-24A0A075B6R9 120 aa4.68□□□□□ -1.66
PDLIM5-219ENST00000514743 WFDC13Q8IUB5 93 aa4.68□□□□□ -1.66
PDLIM5-219ENST00000514743 DEFB105AQ8NG35 78 aa4.68□□□□□ -1.66
PDLIM5-219ENST00000514743 K7EIL1 84 aa4.67□□□□□ -1.66
PDLIM5-219ENST00000514743 SEC61BP60468 96 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-219ENST00000514743 CASC10Q5T4H9 136 aa4.67□□□□□ -1.66
PDLIM5-219ENST00000514743 C9orf163Q8N9P6 203 aa4.67□□□□□ -1.66
PDLIM5-219ENST00000514743 IGLV1-50A0A075B6I6 118 aa4.67□□□□□ -1.66
PDLIM5-219ENST00000514743 IGLV7-46A0A075B6I9 117 aa4.67□□□□□ -1.66
PDLIM5-219ENST00000514743 IGLV9-49A0A0B4J1Y8 123 aa4.67□□□□□ -1.66
PDLIM5-219ENST00000514743 COL6A5A8TX70 2615 aa4.66□□□□□ -1.66
PDLIM5-219ENST00000514743 A8MWP4 228 aa4.65□□□□□ -1.66
PDLIM5-219ENST00000514743 KRTAP25-1Q3LHN0 102 aa4.65□□□□□ -1.66
PDLIM5-219ENST00000514743 TLX1NBP0CAT3 122 aa4.65□□□□□ -1.66
PDLIM5-219ENST00000514743 NDUFAF8A1L188 74 aa4.65□□□□□ -1.67
PDLIM5-219ENST00000514743 DSCR10P59022 87 aa4.65□□□□□ -1.67
PDLIM5-219ENST00000514743 LUZP6Q538Z0 58 aa4.65□□□□□ -1.67
PDLIM5-219ENST00000514743 KRTAP7-1Q8IUC3 87 aa4.65□□□□□ -1.67
PDLIM5-219ENST00000514743 RPL37AP8A6NKH3 93 aa4.64□□□□□ -1.67
PDLIM5-219ENST00000514743 CHTF8P0CG12 524 aa4.64□□□□□ -1.67
PDLIM5-219ENST00000514743 LINC00483Q53H64 154 aa4.64□□□□□ -1.67
PDLIM5-219ENST00000514743 PCOTHQ58A44 107 aa4.63□□□□□ -1.67
PDLIM5-219ENST00000514743 SPATA8Q6RVD6 105 aa4.63□□□□□ -1.67
PDLIM5-219ENST00000514743 C7orf33Q8WU49 177 aa4.63□□□□□ -1.67
PDLIM5-219ENST00000514743 FAM168BA1KXE4 195 aa4.63□□□□□ -1.67
PDLIM5-219ENST00000514743 STARD9Q9P2P6 4700 aa4.62□□□□□ -1.67
PDLIM5-219ENST00000514743 KRTAP4-16G5E9R7 235 aaPredicted RBP4.62□□□□□ -1.67
PDLIM5-219ENST00000514743 IGLV5-37A0A075B6J1 123 aa4.61□□□□□ -1.67
PDLIM5-219ENST00000514743 C20orf166-AS1Q96NR2 134 aa4.61□□□□□ -1.67
PDLIM5-219ENST00000514743 PRKDCP78527 4128 aaKnown RBP4.61□□□□□ -1.67
PDLIM5-219ENST00000514743 KRTAP1-5Q9BYS1 174 aa4.61□□□□□ -1.67
PDLIM5-219ENST00000514743 C8orf17Q9NRJ1 99 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms