RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 CRCT1Q9UGL9 99 aa1.82□□□□□ -2.12
RFC1-216ENST00000514572 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
RFC1-216ENST00000514572 IGKV3D-7A0A0C4DH55 119 aa1.81□□□□□ -2.12
RFC1-216ENST00000514572 IGKV3OR2-268A0A0C4DH90 116 aa1.81□□□□□ -2.12
RFC1-216ENST00000514572 SERF2P84101 59 aa1.81□□□□□ -2.12
RFC1-216ENST00000514572 Q86TA4 180 aa1.81□□□□□ -2.12
RFC1-216ENST00000514572 OR10AG1Q8NH19 301 aa1.81□□□□□ -2.12
RFC1-216ENST00000514572 RAB37Q96AX2 223 aa1.81□□□□□ -2.12
RFC1-216ENST00000514572 M0QY20 66 aa1.8□□□□□ -2.12
RFC1-216ENST00000514572 MGPP08493 103 aa1.8□□□□□ -2.12
RFC1-216ENST00000514572 FABP2P12104 132 aa1.8□□□□□ -2.12
RFC1-216ENST00000514572 IL7P13232 177 aa1.8□□□□□ -2.12
RFC1-216ENST00000514572 ZNF25P17030 456 aaPredicted RBP1.8□□□□□ -2.12
RFC1-216ENST00000514572 TEX261Q6UWH6 196 aa1.8□□□□□ -2.12
RFC1-216ENST00000514572 PPP1R1CQ8WVI7 109 aa1.8□□□□□ -2.12
RFC1-216ENST00000514572 PSMG3Q9BT73 122 aaPredicted RBP1.8□□□□□ -2.12
RFC1-216ENST00000514572 SMIM3Q9BZL3 60 aa1.8□□□□□ -2.12
RFC1-216ENST00000514572 NIT2Q9NQR4 276 aa1.8□□□□□ -2.12
RFC1-216ENST00000514572 TNFSF18Q9UNG2 199 aa1.8□□□□□ -2.12
RFC1-216ENST00000514572 TRBV27A0A0K0K1C4 114 aa1.79□□□□□ -2.12
RFC1-216ENST00000514572 hDV103S1A0JD37 113 aa1.79□□□□□ -2.12
RFC1-216ENST00000514572 INE1O15225 51 aa1.79□□□□□ -2.12
RFC1-216ENST00000514572 CCL25O15444 150 aa1.79□□□□□ -2.12
RFC1-216ENST00000514572 SIX6O95475 246 aa1.79□□□□□ -2.12
RFC1-216ENST00000514572 MPC2O95563 127 aa1.79□□□□□ -2.12
RFC1-216ENST00000514572 NCR2O95944 276 aa1.79□□□□□ -2.12
RFC1-216ENST00000514572 SCGB1A1P11684 91 aa1.79□□□□□ -2.12
RFC1-216ENST00000514572 CRIP1P50238 77 aa1.79□□□□□ -2.12
RFC1-216ENST00000514572 C9orf116Q5BN46 136 aaPredicted RBP1.79□□□□□ -2.12
RFC1-216ENST00000514572 BORCS7-ASMTA0A0B4J1R7 106 aa1.78□□□□□ -2.12
RFC1-216ENST00000514572 CTXND1A0A1B0GTU2 59 aa1.78□□□□□ -2.12
RFC1-216ENST00000514572 LINC00959A0A1B0GUT2 108 aa1.78□□□□□ -2.12
RFC1-216ENST00000514572 A0A1B0GX51 115 aa1.78□□□□□ -2.12
RFC1-216ENST00000514572 F2Z2F3 143 aa1.78□□□□□ -2.12
RFC1-216ENST00000514572 ERC2-IT1O76042 136 aa1.78□□□□□ -2.12
RFC1-216ENST00000514572 C2orf82Q6UX34 121 aa1.78□□□□□ -2.12
RFC1-216ENST00000514572 NDUFA6P56556 154 aa1.77□□□□□ -2.13
RFC1-216ENST00000514572 MRPS36P82909 103 aaKnown RBP1.77□□□□□ -2.13
RFC1-216ENST00000514572 Q5XG85 94 aa1.77□□□□□ -2.13
RFC1-216ENST00000514572 BAGE2Q86Y30 109 aa1.77□□□□□ -2.13
RFC1-216ENST00000514572 LINC00526Q96FQ7 95 aa1.77□□□□□ -2.13
RFC1-216ENST00000514572 BATF3Q9NR55 127 aa1.77□□□□□ -2.13
RFC1-216ENST00000514572 SPANXA1Q9NS26 97 aa1.77□□□□□ -2.13
RFC1-216ENST00000514572 SNURFQ9Y675 71 aa1.77□□□□□ -2.13
RFC1-216ENST00000514572 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.76□□□□□ -2.13
RFC1-216ENST00000514572 TRAV13-1A0A0B4J241 112 aa1.76□□□□□ -2.13
RFC1-216ENST00000514572 IGKV2-29A2NJV5 120 aaPredicted RBP1.76□□□□□ -2.13
RFC1-216ENST00000514572 H3BMG7 143 aa1.76□□□□□ -2.13
RFC1-216ENST00000514572 I3L3M4 83 aa1.76□□□□□ -2.13
RFC1-216ENST00000514572 J3KT08 172 aa1.76□□□□□ -2.13
RFC1-216ENST00000514572 NDUFA1O15239 70 aa1.76□□□□□ -2.13
RFC1-216ENST00000514572 NUPR1O60356 82 aa1.76□□□□□ -2.13
RFC1-216ENST00000514572 SPAG11BQ08648 103 aa1.76□□□□□ -2.13
RFC1-216ENST00000514572 CDC42SE2Q9NRR3 84 aa1.76□□□□□ -2.13
RFC1-216ENST00000514572 MRPL35Q9NZE8 188 aaKnown RBP1.76□□□□□ -2.13
RFC1-216ENST00000514572 C7orf77A4D0Y5 90 aa1.75□□□□□ -2.13
RFC1-216ENST00000514572 IGLC6P0CF74 106 aa1.75□□□□□ -2.13
RFC1-216ENST00000514572 FOXA3P55318 350 aaPredicted RBP1.75□□□□□ -2.13
RFC1-216ENST00000514572 LINC00299Q6ZSB3 139 aa1.75□□□□□ -2.13
RFC1-216ENST00000514572 C9orf62Q8N4C0 152 aa1.75□□□□□ -2.13
RFC1-216ENST00000514572 S100ZQ8WXG8 99 aa1.75□□□□□ -2.13
RFC1-216ENST00000514572 PRELID3AQ96N28 172 aa1.75□□□□□ -2.13
RFC1-216ENST00000514572 CDC42SE1Q9NRR8 79 aa1.75□□□□□ -2.13
RFC1-216ENST00000514572 TRBV30A0A0K0K1B3 111 aa1.74□□□□□ -2.13
RFC1-216ENST00000514572 PPP1R17O96001 155 aa1.74□□□□□ -2.13
RFC1-216ENST00000514572 FABP4P15090 132 aa1.74□□□□□ -2.13
RFC1-216ENST00000514572 FCER1GP30273 86 aa1.74□□□□□ -2.13
RFC1-216ENST00000514572 GNG4P50150 75 aa1.74□□□□□ -2.13
RFC1-216ENST00000514572 ASB16-AS1Q495Z4 193 aa1.74□□□□□ -2.13
RFC1-216ENST00000514572 RPL7L1Q6DKI1 246 aaKnown RBP1.74□□□□□ -2.13
RFC1-216ENST00000514572 C5orf38Q86SI9 138 aa1.74□□□□□ -2.13
RFC1-216ENST00000514572 RPL39LQ96EH5 51 aaKnown RBP1.74□□□□□ -2.13
RFC1-216ENST00000514572 CNFNQ9BYD5 112 aa1.74□□□□□ -2.13
RFC1-216ENST00000514572 ST20Q9HBF5 79 aa1.74□□□□□ -2.13
RFC1-216ENST00000514572 UMAD1C9J7I0 102 aa1.73□□□□□ -2.13
RFC1-216ENST00000514572 BCE1O60756 84 aa1.73□□□□□ -2.13
RFC1-216ENST00000514572 SPAG11AQ6PDA7 123 aa1.73□□□□□ -2.13
RFC1-216ENST00000514572 KCNRGQ8N5I3 272 aa1.73□□□□□ -2.13
RFC1-216ENST00000514572 MANBALQ9NQG1 85 aa1.73□□□□□ -2.13
RFC1-216ENST00000514572 ORMDL1Q9P0S3 153 aa1.73□□□□□ -2.13
RFC1-216ENST00000514572 NDUFA12Q9UI09 145 aa1.73□□□□□ -2.13
RFC1-216ENST00000514572 FXYD6-FXYD2A0A087WZ82 144 aa1.72□□□□□ -2.13
RFC1-216ENST00000514572 POLR2KP53803 58 aaKnown RBP1.72□□□□□ -2.13
RFC1-216ENST00000514572 CKS1BP61024 79 aa1.72□□□□□ -2.13
RFC1-216ENST00000514572 FAM213BQ8TBF2 198 aa1.72□□□□□ -2.13
RFC1-216ENST00000514572 TMEM242Q9NWH2 141 aa1.72□□□□□ -2.13
RFC1-216ENST00000514572 SPANXCQ9NY87 97 aa1.72□□□□□ -2.13
RFC1-216ENST00000514572 C6orf48Q9UBA6 75 aa1.72□□□□□ -2.13
RFC1-216ENST00000514572 UBE2D4Q9Y2X8 147 aa1.72□□□□□ -2.13
RFC1-216ENST00000514572 ZNF727A8MUV8 499 aa1.71□□□□□ -2.14
RFC1-216ENST00000514572 ARPC5O15511 151 aa1.71□□□□□ -2.14
RFC1-216ENST00000514572 FAM19A2Q8N3H0 131 aa1.71□□□□□ -2.14
RFC1-216ENST00000514572 GNG13Q9P2W3 67 aa1.71□□□□□ -2.14
RFC1-216ENST00000514572 C22orf24Q9Y442 160 aa1.71□□□□□ -2.14
RFC1-216ENST00000514572 MUC17Q685J3 4493 aa1.71□□□□□ -2.14
RFC1-216ENST00000514572 A0A1B0GUT8 65 aa1.7□□□□□ -2.14
RFC1-216ENST00000514572 M0R2T5 61 aa1.7□□□□□ -2.14
RFC1-216ENST00000514572 COX7CP15954 63 aa1.7□□□□□ -2.14
RFC1-216ENST00000514572 Q6ZUT4 128 aa1.7□□□□□ -2.14
RFC1-216ENST00000514572 OBSCN-AS1Q96MR7 158 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms