RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 SPRR1AP35321 89 aa5.15□□□□□ -1.59
CCL28-204ENST00000514421 FAM19A5Q7Z5A7 132 aaPredicted RBP5.15□□□□□ -1.59
CCL28-204ENST00000514421 IGLV1-50A0A075B6I6 118 aa5.14□□□□□ -1.59
CCL28-204ENST00000514421 ACYP1P07311 99 aa5.14□□□□□ -1.59
CCL28-204ENST00000514421 PSORS1C2Q9UIG4 136 aa5.14□□□□□ -1.59
CCL28-204ENST00000514421 PKHD1L1Q86WI1 4243 aa5.13□□□□□ -1.59
CCL28-204ENST00000514421 PRYO14603 147 aa5.13□□□□□ -1.59
CCL28-204ENST00000514421 COX7BP24311 80 aa5.13□□□□□ -1.59
CCL28-204ENST00000514421 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.13□□□□□ -1.59
CCL28-204ENST00000514421 NKAPP1Q8N9T2 125 aa5.13□□□□□ -1.59
CCL28-204ENST00000514421 MYCBP2O75592 4640 aa5.13□□□□□ -1.59
CCL28-204ENST00000514421 DMBT1Q9UGM3 2413 aaPredicted RBP5.12□□□□□ -1.59
CCL28-204ENST00000514421 KRTAP29-1A8MX34 341 aaPredicted RBP5.12□□□□□ -1.59
CCL28-204ENST00000514421 JMJD7-PLA2G4BH0Y9G9 81 aa5.12□□□□□ -1.59
CCL28-204ENST00000514421 OXTP01178 125 aa5.12□□□□□ -1.59
CCL28-204ENST00000514421 GHRHP01286 108 aa5.12□□□□□ -1.59
CCL28-204ENST00000514421 UBE2BP63146 152 aa5.12□□□□□ -1.59
CCL28-204ENST00000514421 SPINK6Q6UWN8 80 aa5.12□□□□□ -1.59
CCL28-204ENST00000514421 LRP1Q07954 4544 aaKnown RBP5.11□□□□□ -1.59
CCL28-204ENST00000514421 FAT3Q8TDW7 4589 aa5.11□□□□□ -1.59
CCL28-204ENST00000514421 C1orf137Q5JT78 98 aa5.11□□□□□ -1.59
CCL28-204ENST00000514421 MRPL55Q7Z7F7 128 aaKnown RBP5.11□□□□□ -1.59
CCL28-204ENST00000514421 KRTAP11-1Q8IUC1 163 aa5.11□□□□□ -1.59
CCL28-204ENST00000514421 SIGMAR1Q99720 223 aa5.11□□□□□ -1.59
CCL28-204ENST00000514421 B5MCH6 92 aa5.09□□□□□ -1.59
CCL28-204ENST00000514421 IGLV7-43P04211 117 aa5.09□□□□□ -1.59
CCL28-204ENST00000514421 SCGB1A1P11684 91 aa5.09□□□□□ -1.59
CCL28-204ENST00000514421 Q6ZQY7 126 aa5.09□□□□□ -1.59
CCL28-204ENST00000514421 Q6ZRX8 168 aa5.09□□□□□ -1.59
CCL28-204ENST00000514421 DHRS4-AS1Q9P1J3 65 aa5.09□□□□□ -1.59
CCL28-204ENST00000514421 LOC110117498A0A087WWA1 95 aa5.08□□□□□ -1.6
CCL28-204ENST00000514421 C21orf62-AS1Q17RA5 79 aa5.08□□□□□ -1.6
CCL28-204ENST00000514421 RPL37AP8A6NKH3 93 aa5.07□□□□□ -1.6
CCL28-204ENST00000514421 CCKP06307 115 aa5.07□□□□□ -1.6
CCL28-204ENST00000514421 REG3GQ6UW15 175 aa5.07□□□□□ -1.6
CCL28-204ENST00000514421 IGLV5-48A0A075B6I7 105 aa5.06□□□□□ -1.6
CCL28-204ENST00000514421 H0Y9J4 135 aa5.06□□□□□ -1.6
CCL28-204ENST00000514421 PDE6GP18545 87 aa5.06□□□□□ -1.6
CCL28-204ENST00000514421 Q9BRP9 147 aa5.06□□□□□ -1.6
CCL28-204ENST00000514421 C14orf132Q9NPU4 83 aa5.06□□□□□ -1.6
CCL28-204ENST00000514421 HERC1Q15751 4861 aa5.06□□□□□ -1.6
CCL28-204ENST00000514421 TRBV7-4A0A0J9YYF1 115 aa5.05□□□□□ -1.6
CCL28-204ENST00000514421 ZNF861PO60384 105 aa5.05□□□□□ -1.6
CCL28-204ENST00000514421 BCE1O60756 84 aa5.05□□□□□ -1.6
CCL28-204ENST00000514421 MT-ATP8P03928 68 aa5.05□□□□□ -1.6
CCL28-204ENST00000514421 LINC01547P58512 204 aaPredicted RBP5.05□□□□□ -1.6
CCL28-204ENST00000514421 RBM3P98179 157 aaKnown RBP5.05□□□□□ -1.6
CCL28-204ENST00000514421 Q6Q795 121 aa5.05□□□□□ -1.6
CCL28-204ENST00000514421 Q6ZQT0 140 aa5.05□□□□□ -1.6
CCL28-204ENST00000514421 ETDCA0A1B0GVM5 59 aa5.04□□□□□ -1.6
CCL28-204ENST00000514421 LINC00643Q86TS7 51 aa5.04□□□□□ -1.6
CCL28-204ENST00000514421 TRBV7-7A0A0K0K1E9 115 aa5.03□□□□□ -1.6
CCL28-204ENST00000514421 NDUFV3P56181 108 aaKnown RBP5.03□□□□□ -1.6
CCL28-204ENST00000514421 GAGE2AQ6NT46 116 aa5.03□□□□□ -1.6
CCL28-204ENST00000514421 Q8N377 158 aa5.03□□□□□ -1.6
CCL28-204ENST00000514421 SMCR5Q8TEV8 140 aa5.03□□□□□ -1.6
CCL28-204ENST00000514421 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
CCL28-204ENST00000514421 IMUPQ9GZP8 106 aa5.03□□□□□ -1.6
CCL28-204ENST00000514421 KRTAP10-8P60410 259 aa5.02□□□□□ -1.61
CCL28-204ENST00000514421 TNXBP22105 4242 aa5.01□□□□□ -1.61
CCL28-204ENST00000514421 MT1HL1P0DM35 61 aa5.01□□□□□ -1.61
CCL28-204ENST00000514421 UBE2AP49459 152 aa5.01□□□□□ -1.61
CCL28-204ENST00000514421 DSCR8Q96T75 97 aa5.01□□□□□ -1.61
CCL28-204ENST00000514421 LINC00846Q9NV44 126 aa5.01□□□□□ -1.61
CCL28-204ENST00000514421 LAMTOR3Q9UHA4 124 aa5.01□□□□□ -1.61
CCL28-204ENST00000514421 A0A1B0GW54 56 aa5□□□□□ -1.61
CCL28-204ENST00000514421 PCP4P48539 62 aa5□□□□□ -1.61
CCL28-204ENST00000514421 FAM19A1Q7Z5A9 133 aa5□□□□□ -1.61
CCL28-204ENST00000514421 KRTAP13-1Q8IUC0 172 aa5□□□□□ -1.61
CCL28-204ENST00000514421 ERC2-IT1O76042 136 aa4.99□□□□□ -1.61
CCL28-204ENST00000514421 Q6JHZ5 121 aa4.99□□□□□ -1.61
CCL28-204ENST00000514421 IGLV8-61A0A075B6I0 122 aa4.98□□□□□ -1.61
CCL28-204ENST00000514421 KRTAP1-4P0C5Y4 121 aa4.98□□□□□ -1.61
CCL28-204ENST00000514421 SPRR1BP22528 89 aa4.98□□□□□ -1.61
CCL28-204ENST00000514421 ATP5EP2Q5VTU8 51 aa4.98□□□□□ -1.61
CCL28-204ENST00000514421 SMIM29Q86T20 159 aa4.98□□□□□ -1.61
CCL28-204ENST00000514421 PRLHP81277 87 aa4.97□□□□□ -1.61
CCL28-204ENST00000514421 PRR26Q8N8Z3 221 aa4.97□□□□□ -1.61
CCL28-204ENST00000514421 ST20-AS1Q8NBB2 130 aa4.96□□□□□ -1.62
CCL28-204ENST00000514421 HIGD2AQ9BW72 106 aa4.95□□□□□ -1.62
CCL28-204ENST00000514421 UBL5Q9BZL1 73 aa4.95□□□□□ -1.62
CCL28-204ENST00000514421 A0A1B0GV72 72 aa4.94□□□□□ -1.62
CCL28-204ENST00000514421 CRYGAP11844 174 aa4.94□□□□□ -1.62
CCL28-204ENST00000514421 DEFB105AQ8NG35 78 aa4.94□□□□□ -1.62
CCL28-204ENST00000514421 SPRR4Q96PI1 79 aa4.94□□□□□ -1.62
CCL28-204ENST00000514421 HIST1H4AP62805 103 aaKnown RBP4.93□□□□□ -1.62
CCL28-204ENST00000514421 CXCL6P80162 114 aa4.93□□□□□ -1.62
CCL28-204ENST00000514421 FAM229BQ4G0N7 80 aa4.93□□□□□ -1.62
CCL28-204ENST00000514421 ANAPC11Q9NYG5 84 aa4.93□□□□□ -1.62
CCL28-204ENST00000514421 Q6ZVQ6 151 aa4.92□□□□□ -1.62
CCL28-204ENST00000514421 C3orf22Q8N5N4 141 aa4.92□□□□□ -1.62
CCL28-204ENST00000514421 Q8NBF4 154 aa4.92□□□□□ -1.62
CCL28-204ENST00000514421 A0A087X002 238 aa4.91□□□□□ -1.62
CCL28-204ENST00000514421 A0A1W2PNM2 257 aa4.91□□□□□ -1.62
CCL28-204ENST00000514421 LINC00483Q53H64 154 aa4.91□□□□□ -1.62
CCL28-204ENST00000514421 ZNF706Q9Y5V0 76 aaPredicted RBP4.91□□□□□ -1.62
CCL28-204ENST00000514421 TYMSOSQ8TAI1 123 aa4.9□□□□□ -1.63
CCL28-204ENST00000514421 HMCN2Q8NDA2 5059 aa4.9□□□□□ -1.63
CCL28-204ENST00000514421 KRTAP5-3Q6L8H2 238 aa4.89□□□□□ -1.63
CCL28-204ENST00000514421 IGKV3D-7A0A0C4DH55 119 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms