RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 A0A1W2PPR1 153 aa4.4□□□□□ -1.7
NIPBL-208ENST00000514335 UQCR11O14957 56 aa4.4□□□□□ -1.7
NIPBL-208ENST00000514335 Q6ZSN1 163 aa4.4□□□□□ -1.7
NIPBL-208ENST00000514335 SMIM1B2RUZ4 78 aa4.4□□□□□ -1.71
NIPBL-208ENST00000514335 DEFB110Q30KQ9 67 aa4.4□□□□□ -1.71
NIPBL-208ENST00000514335 H3BQ85 93 aa4.39□□□□□ -1.71
NIPBL-208ENST00000514335 HIVEP2P31629 2446 aa4.39□□□□□ -1.71
NIPBL-208ENST00000514335 FLNAP21333 2647 aaKnown RBP4.39□□□□□ -1.71
NIPBL-208ENST00000514335 CSMD2Q7Z408 3487 aa4.38□□□□□ -1.71
NIPBL-208ENST00000514335 DYNC2H1Q8NCM8 4307 aaKnown RBP4.38□□□□□ -1.71
NIPBL-208ENST00000514335 I3L2K1 104 aa4.38□□□□□ -1.71
NIPBL-208ENST00000514335 ANK3Q12955 4377 aaKnown RBP4.37□□□□□ -1.71
NIPBL-208ENST00000514335 DEFB116Q30KQ4 102 aa4.37□□□□□ -1.71
NIPBL-208ENST00000514335 A0A1B0GU69 56 aa4.37□□□□□ -1.71
NIPBL-208ENST00000514335 APELAP0DMC3 54 aa4.37□□□□□ -1.71
NIPBL-208ENST00000514335 PRR9Q5T870 116 aa4.37□□□□□ -1.71
NIPBL-208ENST00000514335 CAMK2N1Q7Z7J9 78 aa4.36□□□□□ -1.71
NIPBL-208ENST00000514335 HRES1P13985 223 aa4.36□□□□□ -1.71
NIPBL-208ENST00000514335 Q6ZQY7 126 aa4.36□□□□□ -1.71
NIPBL-208ENST00000514335 M0QY20 66 aa4.35□□□□□ -1.71
NIPBL-208ENST00000514335 CRIPTQ9P021 101 aa4.35□□□□□ -1.71
NIPBL-208ENST00000514335 WNK2Q9Y3S1 2297 aa4.34□□□□□ -1.71
NIPBL-208ENST00000514335 K7EQZ3 153 aa4.34□□□□□ -1.71
NIPBL-208ENST00000514335 MXRA5Q9NR99 2828 aa4.34□□□□□ -1.72
NIPBL-208ENST00000514335 A8MTW9 85 aa4.33□□□□□ -1.72
NIPBL-208ENST00000514335 Q96NJ1 140 aa4.33□□□□□ -1.72
NIPBL-208ENST00000514335 WWC2-AS2Q96NR7 200 aa4.33□□□□□ -1.72
NIPBL-208ENST00000514335 ZNF469Q96JG9 3925 aaPredicted RBP4.32□□□□□ -1.72
NIPBL-208ENST00000514335 IGKV2D-24A0A075B6R9 120 aa4.32□□□□□ -1.72
NIPBL-208ENST00000514335 TRGV1A0A0A0MS02 117 aa4.32□□□□□ -1.72
NIPBL-208ENST00000514335 A0A0J9YWU9 116 aa4.32□□□□□ -1.72
NIPBL-208ENST00000514335 TMEM167AQ8TBQ9 72 aa4.32□□□□□ -1.72
NIPBL-208ENST00000514335 DSCR10P59022 87 aa4.32□□□□□ -1.72
NIPBL-208ENST00000514335 Q6YL49 198 aa4.32□□□□□ -1.72
NIPBL-208ENST00000514335 NOTCH1P46531 2555 aa4.32□□□□□ -1.72
NIPBL-208ENST00000514335 TACC2O95359 2948 aa4.32□□□□□ -1.72
NIPBL-208ENST00000514335 DCHS2Q6V1P9 2916 aa4.32□□□□□ -1.72
NIPBL-208ENST00000514335 LINC00304Q8N9R0 145 aa4.31□□□□□ -1.72
NIPBL-208ENST00000514335 NBDYA0A0U1RRE5 68 aa4.31□□□□□ -1.72
NIPBL-208ENST00000514335 PROK1P58294 105 aa4.31□□□□□ -1.72
NIPBL-208ENST00000514335 SLURP1P55000 103 aa4.3□□□□□ -1.72
NIPBL-208ENST00000514335 ZNRD1Q9P1U0 126 aa4.3□□□□□ -1.72
NIPBL-208ENST00000514335 TLN2Q9Y4G6 2542 aa4.29□□□□□ -1.72
NIPBL-208ENST00000514335 FLG2Q5D862 2391 aaPredicted RBP4.29□□□□□ -1.72
NIPBL-208ENST00000514335 PCOTHQ58A44 107 aa4.29□□□□□ -1.72
NIPBL-208ENST00000514335 WFDC13Q8IUB5 93 aa4.28□□□□□ -1.72
NIPBL-208ENST00000514335 SONP18583 2426 aaKnown RBP4.28□□□□□ -1.72
NIPBL-208ENST00000514335 KRTAP23-1A1A580 65 aa4.28□□□□□ -1.72
NIPBL-208ENST00000514335 MRGPRG-AS1Q2M3A8 158 aa4.28□□□□□ -1.72
NIPBL-208ENST00000514335 DNAH1Q9P2D7 4330 aa4.28□□□□□ -1.72
NIPBL-208ENST00000514335 PKD1L1Q8TDX9 2849 aa4.28□□□□□ -1.72
NIPBL-208ENST00000514335 SSBP3-AS1Q7Z2R9 100 aa4.27□□□□□ -1.73
NIPBL-208ENST00000514335 GIG44P09565 113 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-208ENST00000514335 TOMM7Q9P0U1 55 aa4.27□□□□□ -1.73
NIPBL-208ENST00000514335 Q8IZM0 81 aa4.26□□□□□ -1.73
NIPBL-208ENST00000514335 WFDC10BQ8IUB3 73 aa4.26□□□□□ -1.73
NIPBL-208ENST00000514335 KAAG1Q9UBP8 84 aa4.26□□□□□ -1.73
NIPBL-208ENST00000514335 MEGF8Q7Z7M0 2845 aa4.26□□□□□ -1.73
NIPBL-208ENST00000514335 K7EIM0 57 aa4.25□□□□□ -1.73
NIPBL-208ENST00000514335 TGP01266 2768 aa4.25□□□□□ -1.73
NIPBL-208ENST00000514335 AKAP6Q13023 2319 aa4.25□□□□□ -1.73
NIPBL-208ENST00000514335 BIRC6Q9NR09 4857 aa4.25□□□□□ -1.73
NIPBL-208ENST00000514335 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.25□□□□□ -1.73
NIPBL-208ENST00000514335 ALMS1Q8TCU4 4167 aa4.25□□□□□ -1.73
NIPBL-208ENST00000514335 Q8N1X5 172 aa4.25□□□□□ -1.73
NIPBL-208ENST00000514335 DNAH6Q9C0G6 4158 aa4.24□□□□□ -1.73
NIPBL-208ENST00000514335 PRRC2CQ9Y520 2896 aaKnown RBP4.23□□□□□ -1.73
NIPBL-208ENST00000514335 MGAM2Q2M2H8 2515 aa4.23□□□□□ -1.73
NIPBL-208ENST00000514335 DEFB108BQ8NET1 73 aa4.22□□□□□ -1.73
NIPBL-208ENST00000514335 MRPL33O75394 65 aaKnown RBP4.21□□□□□ -1.74
NIPBL-208ENST00000514335 FAM168BA1KXE4 195 aa4.21□□□□□ -1.74
NIPBL-208ENST00000514335 CUBNO60494 3623 aa4.21□□□□□ -1.74
NIPBL-208ENST00000514335 A0A1W2PNN7 141 aa4.2□□□□□ -1.74
NIPBL-208ENST00000514335 KRTAP29-1A8MX34 341 aaPredicted RBP4.2□□□□□ -1.74
NIPBL-208ENST00000514335 DEFB131BA0A096LNP1 70 aa4.19□□□□□ -1.74
NIPBL-208ENST00000514335 C16orf74Q96GX8 76 aa4.19□□□□□ -1.74
NIPBL-208ENST00000514335 NBEAL2Q6ZNJ1 2754 aa4.19□□□□□ -1.74
NIPBL-208ENST00000514335 KRTAP11-1Q8IUC1 163 aa4.19□□□□□ -1.74
NIPBL-208ENST00000514335 A0A1B0GU33 70 aa4.18□□□□□ -1.74
NIPBL-208ENST00000514335 DEFB1P60022 68 aa4.18□□□□□ -1.74
NIPBL-208ENST00000514335 RNF5Q99942 180 aa4.18□□□□□ -1.74
NIPBL-208ENST00000514335 WNK1Q9H4A3 2382 aa4.17□□□□□ -1.74
NIPBL-208ENST00000514335 IGLV7-43P04211 117 aa4.17□□□□□ -1.74
NIPBL-208ENST00000514335 RYR3Q15413 4870 aa4.17□□□□□ -1.74
NIPBL-208ENST00000514335 MAP1AP78559 2803 aaPredicted RBP4.16□□□□□ -1.74
NIPBL-208ENST00000514335 MINOS1Q5TGZ0 78 aa4.15□□□□□ -1.74
NIPBL-208ENST00000514335 Q8N377 158 aa4.15□□□□□ -1.74
NIPBL-208ENST00000514335 MAPK1IP1LQ8NDC0 245 aa4.15□□□□□ -1.74
NIPBL-208ENST00000514335 C5orf56Q8N8D9 126 aa4.15□□□□□ -1.75
NIPBL-208ENST00000514335 KMT2CQ8NEZ4 4911 aaKnown RBP4.14□□□□□ -1.75
NIPBL-208ENST00000514335 CMYA5Q8N3K9 4069 aa4.13□□□□□ -1.75
NIPBL-208ENST00000514335 RPL37AP61513 92 aaKnown RBP4.13□□□□□ -1.75
NIPBL-208ENST00000514335 ACYP2P14621 99 aa4.13□□□□□ -1.75
NIPBL-208ENST00000514335 TPRXLQ17RH7 258 aa4.12□□□□□ -1.75
NIPBL-208ENST00000514335 IGKV2-24A0A0C4DH68 120 aa4.12□□□□□ -1.75
NIPBL-208ENST00000514335 IGLV6-57P01721 117 aa4.12□□□□□ -1.75
NIPBL-208ENST00000514335 IGLV5-48A0A075B6I7 105 aa4.11□□□□□ -1.75
NIPBL-208ENST00000514335 PSORS1C2Q9UIG4 136 aa4.11□□□□□ -1.75
NIPBL-208ENST00000514335 HRNRQ86YZ3 2850 aaPredicted RBP4.1□□□□□ -1.75
NIPBL-208ENST00000514335 PRKDCP78527 4128 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms