RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 FDCSPQ8NFU4 85 aa0.77□□□□□ -2.29
SGCB-203ENST00000514133 TRGV9Q99603 122 aa0.77□□□□□ -2.29
SGCB-203ENST00000514133 PRO0255Q9UI72 69 aa0.77□□□□□ -2.29
SGCB-203ENST00000514133 ZNF469Q96JG9 3925 aaPredicted RBP0.77□□□□□ -2.29
SGCB-203ENST00000514133 CLIP1P30622 1438 aa0.77□□□□□ -2.29
SGCB-203ENST00000514133 CCDC141Q6ZP82 1450 aa0.77□□□□□ -2.29
SGCB-203ENST00000514133 CDC42BPGQ6DT37 1551 aa0.77□□□□□ -2.29
SGCB-203ENST00000514133 C4AP0C0L4 1744 aa0.77□□□□□ -2.29
SGCB-203ENST00000514133 DOT1LQ8TEK3 1739 aa0.77□□□□□ -2.29
SGCB-203ENST00000514133 MDN1Q9NU22 5596 aa0.77□□□□□ -2.29
SGCB-203ENST00000514133 ADGRG4Q8IZF6 3080 aa0.76□□□□□ -2.29
SGCB-203ENST00000514133 MAP1AP78559 2803 aaPredicted RBP0.76□□□□□ -2.29
SGCB-203ENST00000514133 ANKRD36A6QL64 1941 aa0.76□□□□□ -2.29
SGCB-203ENST00000514133 ZNF831Q5JPB2 1677 aa0.76□□□□□ -2.29
SGCB-203ENST00000514133 NSD3Q9BZ95 1437 aa0.76□□□□□ -2.29
SGCB-203ENST00000514133 PSMG4Q5JS54 123 aa0.76□□□□□ -2.29
SGCB-203ENST00000514133 C10orf113Q5VZT2 155 aa0.76□□□□□ -2.29
SGCB-203ENST00000514133 Q9H521 79 aa0.76□□□□□ -2.29
SGCB-203ENST00000514133 SPCS1Q9Y6A9 102 aa0.76□□□□□ -2.29
SGCB-203ENST00000514133 ACANP16112 2415 aa0.76□□□□□ -2.29
SGCB-203ENST00000514133 CSPG4Q6UVK1 2322 aa0.76□□□□□ -2.29
SGCB-203ENST00000514133 PLCE1Q9P212 2302 aa0.76□□□□□ -2.29
SGCB-203ENST00000514133 IQGAP3Q86VI3 1631 aa0.75□□□□□ -2.29
SGCB-203ENST00000514133 KMT2DO14686 5537 aa0.75□□□□□ -2.29
SGCB-203ENST00000514133 TNCP24821 2201 aa0.75□□□□□ -2.29
SGCB-203ENST00000514133 TRBV25-1A0A075B6N4 114 aa0.75□□□□□ -2.29
SGCB-203ENST00000514133 H7BZZ5 65 aa0.75□□□□□ -2.29
SGCB-203ENST00000514133 CNFNQ9BYD5 112 aa0.75□□□□□ -2.29
SGCB-203ENST00000514133 KRTAP2-1Q9BYU5 128 aa0.75□□□□□ -2.29
SGCB-203ENST00000514133 PRO1933Q9H354 126 aa0.75□□□□□ -2.29
SGCB-203ENST00000514133 AKAP9Q99996 3911 aa0.75□□□□□ -2.29
SGCB-203ENST00000514133 ARFGEF2Q9Y6D5 1785 aa0.75□□□□□ -2.29
SGCB-203ENST00000514133 KMT2AQ03164 3969 aa0.74□□□□□ -2.29
SGCB-203ENST00000514133 CCDC18Q5T9S5 1454 aa0.74□□□□□ -2.29
SGCB-203ENST00000514133 CEP162Q5TB80 1403 aa0.74□□□□□ -2.29
SGCB-203ENST00000514133 A0A087WVE0 104 aa0.74□□□□□ -2.29
SGCB-203ENST00000514133 UQCRHLA0A096LP55 91 aa0.74□□□□□ -2.29
SGCB-203ENST00000514133 C7orf77A4D0Y5 90 aa0.74□□□□□ -2.29
SGCB-203ENST00000514133 SYS1-DBNDD2H3BUS1 97 aa0.74□□□□□ -2.29
SGCB-203ENST00000514133 SPINK6Q6UWN8 80 aa0.74□□□□□ -2.29
SGCB-203ENST00000514133 ABCC6O95255 1503 aa0.74□□□□□ -2.29
SGCB-203ENST00000514133 CENPEQ02224 2701 aa0.73□□□□□ -2.29
SGCB-203ENST00000514133 DDX60LQ5H9U9 1706 aaKnown RBP0.73□□□□□ -2.29
SGCB-203ENST00000514133 FAM208AQ9UK61 1670 aaKnown RBP0.73□□□□□ -2.29
SGCB-203ENST00000514133 TRBV6-1A0A0K0K1D8 114 aa0.73□□□□□ -2.29
SGCB-203ENST00000514133 TRBV7-7A0A0K0K1E9 115 aa0.73□□□□□ -2.29
SGCB-203ENST00000514133 PRH1P02810 166 aa0.73□□□□□ -2.29
SGCB-203ENST00000514133 PTPRQQ9UMZ3 2332 aa0.73□□□□□ -2.29
SGCB-203ENST00000514133 BCORQ6W2J9 1755 aa0.73□□□□□ -2.29
SGCB-203ENST00000514133 TACC2O95359 2948 aa0.72□□□□□ -2.29
SGCB-203ENST00000514133 FRAS1Q86XX4 4008 aa0.72□□□□□ -2.29
SGCB-203ENST00000514133 LCN9Q8WX39 176 aa0.72□□□□□ -2.29
SGCB-203ENST00000514133 LINC01600Q96MT4 127 aa0.72□□□□□ -2.29
SGCB-203ENST00000514133 TP53AIP1Q9HCN2 124 aa0.72□□□□□ -2.29
SGCB-203ENST00000514133 CACNA1EQ15878 2313 aa0.72□□□□□ -2.29
SGCB-203ENST00000514133 A0A0G2JMZ2 1700 aa0.72□□□□□ -2.29
SGCB-203ENST00000514133 ANKARQ7Z5J8 1434 aa0.72□□□□□ -2.29
SGCB-203ENST00000514133 NFAT5O94916 1531 aa0.71□□□□□ -2.3
SGCB-203ENST00000514133 V9GYS6 101 aa0.71□□□□□ -2.3
SGCB-203ENST00000514133 DDX60Q8IY21 1712 aaKnown RBP0.71□□□□□ -2.3
SGCB-203ENST00000514133 DNAJC13O75165 2243 aa0.7□□□□□ -2.3
SGCB-203ENST00000514133 SMR3AQ99954 134 aa0.7□□□□□ -2.3
SGCB-203ENST00000514133 LINC00846Q9NV44 126 aa0.7□□□□□ -2.3
SGCB-203ENST00000514133 ANKRD50Q9ULJ7 1429 aa0.7□□□□□ -2.3
SGCB-203ENST00000514133 A0A1B0GUL6 1792 aa0.7□□□□□ -2.3
SGCB-203ENST00000514133 URB1O60287 2271 aaKnown RBP0.69□□□□□ -2.3
SGCB-203ENST00000514133 CD163L1Q9NR16 1453 aa0.69□□□□□ -2.3
SGCB-203ENST00000514133 FXYD6-FXYD2A0A087WZ82 144 aa0.69□□□□□ -2.3
SGCB-203ENST00000514133 LRRC37AA6NMS7 1700 aa0.69□□□□□ -2.3
SGCB-203ENST00000514133 H3BQF6 201 aa0.68□□□□□ -2.3
SGCB-203ENST00000514133 GYPAP02724 150 aa0.68□□□□□ -2.3
SGCB-203ENST00000514133 PIGYQ3MUY2 71 aa0.68□□□□□ -2.3
SGCB-203ENST00000514133 Q8IZM0 81 aa0.68□□□□□ -2.3
SGCB-203ENST00000514133 DEFB107AQ8IZN7 70 aa0.68□□□□□ -2.3
SGCB-203ENST00000514133 GOLGA4Q13439 2230 aaKnown RBP0.68□□□□□ -2.3
SGCB-203ENST00000514133 ANKRD36CQ5JPF3 1778 aa0.68□□□□□ -2.3
SGCB-203ENST00000514133 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
SGCB-203ENST00000514133 DUOX1Q9NRD9 1551 aa0.67□□□□□ -2.3
SGCB-203ENST00000514133 ARMS2P0C7Q2 107 aa0.67□□□□□ -2.3
SGCB-203ENST00000514133 GNG2P59768 71 aa0.67□□□□□ -2.3
SGCB-203ENST00000514133 ETDBQ3ZM63 59 aa0.67□□□□□ -2.3
SGCB-203ENST00000514133 ZNF720Q7Z2F6 126 aa0.67□□□□□ -2.3
SGCB-203ENST00000514133 C20orf78Q9BR46 151 aa0.67□□□□□ -2.3
SGCB-203ENST00000514133 CMYA5Q8N3K9 4069 aa0.67□□□□□ -2.3
SGCB-203ENST00000514133 USH2AO75445 5202 aa0.66□□□□□ -2.3
SGCB-203ENST00000514133 KIF20BQ96Q89 1820 aa0.66□□□□□ -2.3
SGCB-203ENST00000514133 MUC12Q9UKN1 5478 aa0.66□□□□□ -2.3
SGCB-203ENST00000514133 TRBV7-4A0A0J9YYF1 115 aa0.66□□□□□ -2.3
SGCB-203ENST00000514133 I3L2K1 104 aa0.66□□□□□ -2.3
SGCB-203ENST00000514133 FAT3Q8TDW7 4589 aa0.66□□□□□ -2.3
SGCB-203ENST00000514133 CSMD3Q7Z407 3707 aa0.66□□□□□ -2.3
SGCB-203ENST00000514133 USF3Q68DE3 2245 aa0.65□□□□□ -2.3
SGCB-203ENST00000514133 EDC4Q6P2E9 1401 aaKnown RBP0.65□□□□□ -2.3
SGCB-203ENST00000514133 ACACAQ13085 2346 aa0.65□□□□□ -2.3
SGCB-203ENST00000514133 ANK2Q01484 3957 aa0.65□□□□□ -2.31
SGCB-203ENST00000514133 LINC00959A0A1B0GUT2 108 aa0.65□□□□□ -2.31
SGCB-203ENST00000514133 LOC730098B7Z3J9 87 aa0.65□□□□□ -2.31
SGCB-203ENST00000514133 F8WEM9 126 aa0.65□□□□□ -2.31
SGCB-203ENST00000514133 LELP1Q5T871 98 aa0.65□□□□□ -2.31
SGCB-203ENST00000514133 HIGD1BQ9P298 99 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms