RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 TMEM256-PLSCR3K7ERE1 68 aa2.84□□□□□ -1.95
CLDND1-228ENST00000513873 NCR3O14931 201 aa2.84□□□□□ -1.95
CLDND1-228ENST00000513873 IGKV2D-28P01615 120 aa2.84□□□□□ -1.95
CLDND1-228ENST00000513873 IGLV6-57P01721 117 aa2.84□□□□□ -1.95
CLDND1-228ENST00000513873 INAFM2P0DMQ5 153 aa2.84□□□□□ -1.95
CLDND1-228ENST00000513873 ANKRD29Q8N6D5 301 aa2.84□□□□□ -1.95
CLDND1-228ENST00000513873 LINC00337Q8N6G1 96 aa2.84□□□□□ -1.95
CLDND1-228ENST00000513873 LINC00526Q96FQ7 95 aa2.84□□□□□ -1.95
CLDND1-228ENST00000513873 DPH3Q96FX2 82 aa2.84□□□□□ -1.95
CLDND1-228ENST00000513873 BAALC-AS2P0C853 105 aa2.83□□□□□ -1.96
CLDND1-228ENST00000513873 COX7BP24311 80 aa2.83□□□□□ -1.96
CLDND1-228ENST00000513873 KRTAP12-2P59991 146 aa2.83□□□□□ -1.96
CLDND1-228ENST00000513873 C6orf99Q4VX62 202 aa2.83□□□□□ -1.96
CLDND1-228ENST00000513873 TEN1Q86WV5 123 aa2.83□□□□□ -1.96
CLDND1-228ENST00000513873 PPDPFLQ8WWR9 84 aa2.83□□□□□ -1.96
CLDND1-228ENST00000513873 LINC01600Q96MT4 127 aa2.83□□□□□ -1.96
CLDND1-228ENST00000513873 XAGE1AQ9HD64 81 aa2.83□□□□□ -1.96
CLDND1-228ENST00000513873 ANAPC11Q9NYG5 84 aa2.83□□□□□ -1.96
CLDND1-228ENST00000513873 ORMDL1Q9P0S3 153 aa2.83□□□□□ -1.96
CLDND1-228ENST00000513873 DNAH17Q9UFH2 4485 aa2.83□□□□□ -1.96
CLDND1-228ENST00000513873 hADV29S1A0JD25 119 aa2.82□□□□□ -1.96
CLDND1-228ENST00000513873 JMJD7-PLA2G4BH0Y9G9 81 aa2.82□□□□□ -1.96
CLDND1-228ENST00000513873 LECT2O14960 151 aa2.82□□□□□ -1.96
CLDND1-228ENST00000513873 ZNF73O43830 326 aaPredicted RBP2.82□□□□□ -1.96
CLDND1-228ENST00000513873 ACYP1P07311 99 aa2.82□□□□□ -1.96
CLDND1-228ENST00000513873 WFDC2Q14508 124 aa2.82□□□□□ -1.96
CLDND1-228ENST00000513873 MRPL55Q7Z7F7 128 aaKnown RBP2.82□□□□□ -1.96
CLDND1-228ENST00000513873 Q8N814 137 aa2.82□□□□□ -1.96
CLDND1-228ENST00000513873 FAT2Q9NYQ8 4349 aa2.82□□□□□ -1.96
CLDND1-228ENST00000513873 FLG2Q5D862 2391 aaPredicted RBP2.81□□□□□ -1.96
CLDND1-228ENST00000513873 VPS13DQ5THJ4 4388 aa2.81□□□□□ -1.96
CLDND1-228ENST00000513873 TRBV10-3A0A0K0K1G6 114 aa2.81□□□□□ -1.96
CLDND1-228ENST00000513873 ETDCA0A1B0GVM5 59 aa2.81□□□□□ -1.96
CLDND1-228ENST00000513873 M0R2N4 97 aa2.81□□□□□ -1.96
CLDND1-228ENST00000513873 PDE6GP18545 87 aa2.81□□□□□ -1.96
CLDND1-228ENST00000513873 PRR3P79522 188 aaKnown RBP2.81□□□□□ -1.96
CLDND1-228ENST00000513873 ETDBQ3ZM63 59 aa2.81□□□□□ -1.96
CLDND1-228ENST00000513873 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.81□□□□□ -1.96
CLDND1-228ENST00000513873 LINC00575Q6W349 94 aa2.81□□□□□ -1.96
CLDND1-228ENST00000513873 C9orf163Q8N9P6 203 aa2.81□□□□□ -1.96
CLDND1-228ENST00000513873 CLEC2BQ92478 149 aa2.81□□□□□ -1.96
CLDND1-228ENST00000513873 KCNQ1DNQ9H478 68 aa2.81□□□□□ -1.96
CLDND1-228ENST00000513873 DNAH2Q9P225 4427 aa2.8□□□□□ -1.96
CLDND1-228ENST00000513873 IGLV8-61A0A075B6I0 122 aa2.8□□□□□ -1.96
CLDND1-228ENST00000513873 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.8□□□□□ -1.96
CLDND1-228ENST00000513873 A0A087WTM6 91 aa2.8□□□□□ -1.96
CLDND1-228ENST00000513873 LRCOL1A6NCL2 159 aa2.8□□□□□ -1.96
CLDND1-228ENST00000513873 ELOF1P60002 83 aaKnown RBP2.8□□□□□ -1.96
CLDND1-228ENST00000513873 UBE2BP63146 152 aa2.8□□□□□ -1.96
CLDND1-228ENST00000513873 C9orf129Q5T035 196 aaKnown RBP2.8□□□□□ -1.96
CLDND1-228ENST00000513873 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
CLDND1-228ENST00000513873 VPS25Q9BRG1 176 aa2.8□□□□□ -1.96
CLDND1-228ENST00000513873 PRO0461Q9UI25 63 aa2.8□□□□□ -1.96
CLDND1-228ENST00000513873 C22orf24Q9Y442 160 aa2.8□□□□□ -1.96
CLDND1-228ENST00000513873 DNAH11Q96DT5 4516 aa2.8□□□□□ -1.96
CLDND1-228ENST00000513873 IGLV1-50A0A075B6I6 118 aa2.79□□□□□ -1.96
CLDND1-228ENST00000513873 IGKV2-24A0A0C4DH68 120 aa2.79□□□□□ -1.96
CLDND1-228ENST00000513873 Q6ZRN7 208 aaPredicted RBP2.79□□□□□ -1.96
CLDND1-228ENST00000513873 FAM19A5Q7Z5A7 132 aaPredicted RBP2.79□□□□□ -1.96
CLDND1-228ENST00000513873 C7orf33Q8WU49 177 aa2.79□□□□□ -1.96
CLDND1-228ENST00000513873 LINC00167Q96N53 147 aa2.79□□□□□ -1.96
CLDND1-228ENST00000513873 DSCR8Q96T75 97 aa2.79□□□□□ -1.96
CLDND1-228ENST00000513873 MYCBP2O75592 4640 aa2.79□□□□□ -1.96
CLDND1-228ENST00000513873 DYNC1H1Q14204 4646 aaKnown RBP2.78□□□□□ -1.96
CLDND1-228ENST00000513873 APOBP04114 4563 aaKnown RBP2.78□□□□□ -1.96
CLDND1-228ENST00000513873 VPS13BQ7Z7G8 4022 aa2.78□□□□□ -1.96
CLDND1-228ENST00000513873 FAM240AA0A1B0GVK7 77 aa2.78□□□□□ -1.96
CLDND1-228ENST00000513873 KRTAP11-1Q8IUC1 163 aa2.78□□□□□ -1.96
CLDND1-228ENST00000513873 MTURNQ8N3F0 131 aa2.78□□□□□ -1.96
CLDND1-228ENST00000513873 LAMTOR3Q9UHA4 124 aa2.78□□□□□ -1.96
CLDND1-228ENST00000513873 A0A096LNI7 61 aa2.77□□□□□ -1.97
CLDND1-228ENST00000513873 F8WEM9 126 aa2.77□□□□□ -1.97
CLDND1-228ENST00000513873 RTL8CO15255 209 aa2.77□□□□□ -1.97
CLDND1-228ENST00000513873 UBE2AP49459 152 aa2.77□□□□□ -1.97
CLDND1-228ENST00000513873 RBM3P98179 157 aaKnown RBP2.77□□□□□ -1.97
CLDND1-228ENST00000513873 SDIM1Q6ZPB5 146 aa2.77□□□□□ -1.97
CLDND1-228ENST00000513873 Q6ZRX8 168 aa2.77□□□□□ -1.97
CLDND1-228ENST00000513873 TEX49A0A1B0GTD5 131 aa2.76□□□□□ -1.97
CLDND1-228ENST00000513873 A0A1B0GW54 56 aa2.76□□□□□ -1.97
CLDND1-228ENST00000513873 SPRR1AP35321 89 aa2.76□□□□□ -1.97
CLDND1-228ENST00000513873 Q6ZQY7 126 aa2.76□□□□□ -1.97
CLDND1-228ENST00000513873 FAM19A1Q7Z5A9 133 aa2.76□□□□□ -1.97
CLDND1-228ENST00000513873 SIGMAR1Q99720 223 aa2.76□□□□□ -1.97
CLDND1-228ENST00000513873 ZNF706Q9Y5V0 76 aaPredicted RBP2.76□□□□□ -1.97
CLDND1-228ENST00000513873 BCE1O60756 84 aa2.75□□□□□ -1.97
CLDND1-228ENST00000513873 Q8NDZ9 215 aa2.75□□□□□ -1.97
CLDND1-228ENST00000513873 SPACA4Q8TDM5 124 aa2.75□□□□□ -1.97
CLDND1-228ENST00000513873 LOC110117498A0A087WWA1 95 aa2.74□□□□□ -1.97
CLDND1-228ENST00000513873 A0A1W2PNN7 141 aa2.74□□□□□ -1.97
CLDND1-228ENST00000513873 CCKP06307 115 aa2.74□□□□□ -1.97
CLDND1-228ENST00000513873 FUSP35637 526 aaKnown RBP eCLIP2.74□□□□□ -1.97
CLDND1-228ENST00000513873 OBSCN-AS1Q96MR7 158 aa2.74□□□□□ -1.97
CLDND1-228ENST00000513873 UBL5Q9BZL1 73 aa2.74□□□□□ -1.97
CLDND1-228ENST00000513873 PLAC8Q9NZF1 115 aa2.74□□□□□ -1.97
CLDND1-228ENST00000513873 KRTAP4-16G5E9R7 235 aaPredicted RBP2.73□□□□□ -1.97
CLDND1-228ENST00000513873 ATP5EP2Q5VTU8 51 aa2.73□□□□□ -1.97
CLDND1-228ENST00000513873 PHF5AQ7RTV0 110 aaKnown RBP2.73□□□□□ -1.97
CLDND1-228ENST00000513873 LINC00643Q86TS7 51 aa2.73□□□□□ -1.97
CLDND1-228ENST00000513873 DEFB105AQ8NG35 78 aa2.73□□□□□ -1.97
CLDND1-228ENST00000513873 C14orf132Q9NPU4 83 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms