RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 CIRBP-AS1Q8TBR5 109 aa10.48□□□□□ -0.73
HMGCL-209ENST00000513148 DNAH8Q96JB1 4490 aa10.48□□□□□ -0.73
HMGCL-209ENST00000513148 SPACA4Q8TDM5 124 aa10.48□□□□□ -0.73
HMGCL-209ENST00000513148 HSPG2P98160 4391 aa10.48□□□□□ -0.73
HMGCL-209ENST00000513148 F8WEM9 126 aa10.47□□□□□ -0.73
HMGCL-209ENST00000513148 SMR3BP02814 79 aaPredicted RBP10.47□□□□□ -0.73
HMGCL-209ENST00000513148 COX17Q14061 63 aa10.46□□□□□ -0.73
HMGCL-209ENST00000513148 SEC61GP60059 68 aa10.46□□□□□ -0.74
HMGCL-209ENST00000513148 C1orf195Q5TG92 126 aa10.46□□□□□ -0.74
HMGCL-209ENST00000513148 Q6ZRP5 223 aa10.45□□□□□ -0.74
HMGCL-209ENST00000513148 TRBV7-4A0A0J9YYF1 115 aa10.45□□□□□ -0.74
HMGCL-209ENST00000513148 LINC00575Q6W349 94 aa10.44□□□□□ -0.74
HMGCL-209ENST00000513148 Q6ZVQ6 151 aa10.44□□□□□ -0.74
HMGCL-209ENST00000513148 LINC00474Q9P2X8 69 aa10.43□□□□□ -0.74
HMGCL-209ENST00000513148 KRTAP17-1Q9BYP8 105 aa10.43□□□□□ -0.74
HMGCL-209ENST00000513148 TLX1NBP0CAT3 122 aa10.42□□□□□ -0.74
HMGCL-209ENST00000513148 HERC2O95714 4834 aa10.41□□□□□ -0.74
HMGCL-209ENST00000513148 LAMTOR3Q9UHA4 124 aa10.41□□□□□ -0.74
HMGCL-209ENST00000513148 BRK1Q8WUW1 75 aa10.4□□□□□ -0.74
HMGCL-209ENST00000513148 SNURFQ9Y675 71 aa10.4□□□□□ -0.75
HMGCL-209ENST00000513148 PLAC8Q9NZF1 115 aa10.39□□□□□ -0.75
HMGCL-209ENST00000513148 Q8N1X5 172 aa10.38□□□□□ -0.75
HMGCL-209ENST00000513148 LINC00528Q8N1L1 170 aa10.38□□□□□ -0.75
HMGCL-209ENST00000513148 XAGE1AQ9HD64 81 aa10.38□□□□□ -0.75
HMGCL-209ENST00000513148 A0A1W2PNN7 141 aa10.37□□□□□ -0.75
HMGCL-209ENST00000513148 FAM168BA1KXE4 195 aa10.37□□□□□ -0.75
HMGCL-209ENST00000513148 Q5VSD8 79 aa10.36□□□□□ -0.75
HMGCL-209ENST00000513148 TMEM254Q8TBM7 123 aa10.36□□□□□ -0.75
HMGCL-209ENST00000513148 C6orf99Q4VX62 202 aa10.34□□□□□ -0.75
HMGCL-209ENST00000513148 FAM229AH3BQW9 127 aa10.34□□□□□ -0.75
HMGCL-209ENST00000513148 NREPQ16612 68 aa10.34□□□□□ -0.75
HMGCL-209ENST00000513148 KRTAP4-5Q9BYR2 181 aa10.34□□□□□ -0.75
HMGCL-209ENST00000513148 FAT1Q14517 4588 aa10.34□□□□□ -0.75
HMGCL-209ENST00000513148 A0A0U1RQV1 116 aa10.31□□□□□ -0.76
HMGCL-209ENST00000513148 BPY2O14599 106 aa10.3□□□□□ -0.76
HMGCL-209ENST00000513148 PHF5AQ7RTV0 110 aaKnown RBP10.3□□□□□ -0.76
HMGCL-209ENST00000513148 KRTAP7-1Q8IUC3 87 aa10.3□□□□□ -0.76
HMGCL-209ENST00000513148 C7orf33Q8WU49 177 aa10.3□□□□□ -0.76
HMGCL-209ENST00000513148 SERTAD4-AS1Q5TG53 156 aa10.29□□□□□ -0.76
HMGCL-209ENST00000513148 RPL37AP61513 92 aaKnown RBP10.28□□□□□ -0.76
HMGCL-209ENST00000513148 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.28□□□□□ -0.76
HMGCL-209ENST00000513148 PRYO14603 147 aa10.28□□□□□ -0.76
HMGCL-209ENST00000513148 IGLV6-57P01721 117 aa10.28□□□□□ -0.76
HMGCL-209ENST00000513148 PRR3P79522 188 aaKnown RBP10.28□□□□□ -0.76
HMGCL-209ENST00000513148 PRR15Q8IV56 129 aa10.28□□□□□ -0.76
HMGCL-209ENST00000513148 PLA2G1BP04054 148 aaKnown RBP10.27□□□□□ -0.77
HMGCL-209ENST00000513148 OCR1Q9BZK8 76 aa10.26□□□□□ -0.77
HMGCL-209ENST00000513148 SRRM2Q9UQ35 2752 aaKnown RBP10.26□□□□□ -0.77
HMGCL-209ENST00000513148 VPS13BQ7Z7G8 4022 aa10.24□□□□□ -0.77
HMGCL-209ENST00000513148 UBE2BP63146 152 aa10.23□□□□□ -0.77
HMGCL-209ENST00000513148 Q6ZQY7 126 aa10.23□□□□□ -0.77
HMGCL-209ENST00000513148 ABCA13Q86UQ4 5058 aa10.22□□□□□ -0.77
HMGCL-209ENST00000513148 COX7BP24311 80 aa10.22□□□□□ -0.77
HMGCL-209ENST00000513148 KRTAP10-4P60372 401 aaPredicted RBP10.22□□□□□ -0.77
HMGCL-209ENST00000513148 Q1T7F1 81 aa10.22□□□□□ -0.77
HMGCL-209ENST00000513148 FAM229BQ4G0N7 80 aa10.22□□□□□ -0.77
HMGCL-209ENST00000513148 NKAPP1Q8N9T2 125 aa10.22□□□□□ -0.77
HMGCL-209ENST00000513148 Q8NDZ9 215 aa10.21□□□□□ -0.77
HMGCL-209ENST00000513148 MPLKIPQ8TAP9 179 aa10.21□□□□□ -0.77
HMGCL-209ENST00000513148 MRPL55Q7Z7F7 128 aaKnown RBP10.21□□□□□ -0.78
HMGCL-209ENST00000513148 KRTAP11-1Q8IUC1 163 aa10.21□□□□□ -0.78
HMGCL-209ENST00000513148 PLA2G2DQ9UNK4 145 aa10.21□□□□□ -0.78
HMGCL-209ENST00000513148 VPREB1P12018 145 aa10.19□□□□□ -0.78
HMGCL-209ENST00000513148 PSORS1C2Q9UIG4 136 aa10.19□□□□□ -0.78
HMGCL-209ENST00000513148 PCLOQ9Y6V0 5065 aa10.19□□□□□ -0.78
HMGCL-209ENST00000513148 A0A1B0GW54 56 aa10.18□□□□□ -0.78
HMGCL-209ENST00000513148 IGKV4-1P06312 121 aa10.18□□□□□ -0.78
HMGCL-209ENST00000513148 RPL37AP8A6NKH3 93 aa10.17□□□□□ -0.78
HMGCL-209ENST00000513148 PMAIP1Q13794 54 aa10.17□□□□□ -0.78
HMGCL-209ENST00000513148 DIRC1Q969H9 104 aa10.17□□□□□ -0.78
HMGCL-209ENST00000513148 IGLV5-37A0A075B6J1 123 aa10.17□□□□□ -0.78
HMGCL-209ENST00000513148 hDV103S1A0JD37 113 aa10.17□□□□□ -0.78
HMGCL-209ENST00000513148 C1orf137Q5JT78 98 aa10.16□□□□□ -0.78
HMGCL-209ENST00000513148 ELOF1P60002 83 aaKnown RBP10.14□□□□□ -0.79
HMGCL-209ENST00000513148 ZNF73O43830 326 aaPredicted RBP10.11□□□□□ -0.79
HMGCL-209ENST00000513148 M0R378 163 aa10.1□□□□□ -0.79
HMGCL-209ENST00000513148 IGLV1-50A0A075B6I6 118 aa10.09□□□□□ -0.79
HMGCL-209ENST00000513148 HIGD2AQ9BW72 106 aa10.08□□□□□ -0.8
HMGCL-209ENST00000513148 CYP4F30PQ9H0H9 118 aa10.08□□□□□ -0.8
HMGCL-209ENST00000513148 FLG2Q5D862 2391 aaPredicted RBP10.08□□□□□ -0.8
HMGCL-209ENST00000513148 IGLV7-43P04211 117 aa10.07□□□□□ -0.8
HMGCL-209ENST00000513148 ZCCHC13Q8WW36 166 aaKnown RBP10.07□□□□□ -0.8
HMGCL-209ENST00000513148 MYCBP2O75592 4640 aa10.05□□□□□ -0.8
HMGCL-209ENST00000513148 CD164Q04900 197 aa10.04□□□□□ -0.8
HMGCL-209ENST00000513148 REG3GQ6UW15 175 aa10.04□□□□□ -0.8
HMGCL-209ENST00000513148 SPINK6Q6UWN8 80 aa10.03□□□□□ -0.8
HMGCL-209ENST00000513148 C1orf64Q8NEQ6 169 aa10.03□□□□□ -0.8
HMGCL-209ENST00000513148 PKHD1L1Q86WI1 4243 aa10.02□□□□□ -0.8
HMGCL-209ENST00000513148 IGLV5-48A0A075B6I7 105 aa10□□□□□ -0.81
HMGCL-209ENST00000513148 UBE2AP49459 152 aa10□□□□□ -0.81
HMGCL-209ENST00000513148 Q8N9L7 120 aa10□□□□□ -0.81
HMGCL-209ENST00000513148 PRLHP81277 87 aa10□□□□□ -0.81
HMGCL-209ENST00000513148 ZNF861PO60384 105 aa9.99□□□□□ -0.81
HMGCL-209ENST00000513148 NDUFB1O75438 58 aa9.99□□□□□ -0.81
HMGCL-209ENST00000513148 KCNQ1DNQ9H478 68 aa9.99□□□□□ -0.81
HMGCL-209ENST00000513148 TRAV22A0A0B4J277 110 aa9.97□□□□□ -0.81
HMGCL-209ENST00000513148 ETDCA0A1B0GVM5 59 aa9.97□□□□□ -0.81
HMGCL-209ENST00000513148 LRP1Q07954 4544 aaKnown RBP9.97□□□□□ -0.81
HMGCL-209ENST00000513148 H0Y9J4 135 aa9.97□□□□□ -0.81
HMGCL-209ENST00000513148 SMIM29Q86T20 159 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms