RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 DIP2BQ9P265 1576 aa-0.72□□□□□ -2.52
PDGFC-208ENST00000512711 INO80Q9ULG1 1556 aaPredicted RBP-0.72□□□□□ -2.52
PDGFC-208ENST00000512711 TARBP1Q13395 1621 aaKnown RBP-0.72□□□□□ -2.52
PDGFC-208ENST00000512711 ABCA9Q8IUA7 1624 aa-0.72□□□□□ -2.52
PDGFC-208ENST00000512711 RALGAPBQ86X10 1494 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 EFCAB6Q5THR3 1501 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 FAM135AQ9P2D6 1515 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 NESP48681 1621 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 TRAV13-2A0A0B4J235 113 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 I3L3M4 83 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 UQCR11O14957 56 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 SIX6O95475 246 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 DBIP07108 87 aaKnown RBP-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 IGLC6P0CF74 106 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 IAPPP10997 89 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 POLR2KP53803 58 aaKnown RBP-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 SCIMPQ6UWF3 145 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 SMIM15Q7Z3B0 74 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 BAGE2Q86Y30 109 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 LINC00474Q9P2X8 69 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 LENEPQ9Y5L5 61 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 SCN7AQ01118 1682 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 UNC13AQ9UPW8 1703 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 FANCAO15360 1455 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 ZNF518AQ6AHZ1 1483 aa-0.73□□□□□ -2.53
PDGFC-208ENST00000512711 ABCA8O94911 1581 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 ABCA5Q8WWZ7 1642 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 DDX60LQ5H9U9 1706 aaKnown RBP-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 TRAV21A0A0B4J279 112 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 A0A0G2JND7 137 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 LOC100130705A0A1B0GUX0 176 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 C7orf77A4D0Y5 90 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 OOSP1A8MZH6 123 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 J3QR89 54 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 ARPC5O15511 151 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 MGPP08493 103 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 C3orf79P0CE67 100 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 LINC00694P0DN24 101 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 LINC00158P58513 81 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 UBE2L3P68036 154 aaKnown RBP-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 BTG2P78543 158 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 Q6AWC8 147 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 COMMD6Q7Z4G1 85 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 MUSTN1Q8IVN3 82 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 Q8N8P6 123 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 TRGV9Q99603 122 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 AIF1LQ9BQI0 150 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 DDA1Q9BW61 102 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 SMIM3Q9BZL3 60 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 SPANXCQ9NY87 97 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 ABCC1P33527 1531 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 RB1CC1Q8TDY2 1594 aa-0.74□□□□□ -2.53
PDGFC-208ENST00000512711 C3P01024 1663 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 MYO5CQ9NQX4 1742 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 TRBV7-4A0A0J9YYF1 115 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 IGLC7A0M8Q6 106 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 K7ERU9 68 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 HMGN4O00479 90 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 COX7BP24311 80 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 S100A5P33763 92 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 TPPP2P59282 170 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 MORN2Q502X0 79 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 NCBP2-AS2Q69YL0 99 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 KCNRGQ8N5I3 272 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 SERP2Q8N6R1 65 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 FAM107BQ9H098 131 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 ANKARQ7Z5J8 1434 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 CCDC18Q5T9S5 1454 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 IFT140Q96RY7 1462 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 AGLP35573 1532 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 DCAF1Q9Y4B6 1507 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 ABCA6Q8N139 1617 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 MROH2AA6NES4 1674 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 PPLO60437 1756 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 ARFGEF2Q9Y6D5 1785 aa-0.75□□□□□ -2.53
PDGFC-208ENST00000512711 TCHHQ07283 1943 aa-0.76□□□□□ -2.53
PDGFC-208ENST00000512711 PIGBOS1A0A0B4J2F0 54 aa-0.76□□□□□ -2.53
PDGFC-208ENST00000512711 TRBV7-7A0A0K0K1E9 115 aa-0.76□□□□□ -2.53
PDGFC-208ENST00000512711 DEFB108AA8MXU0 73 aa-0.76□□□□□ -2.53
PDGFC-208ENST00000512711 D6R8Y8 96 aa-0.76□□□□□ -2.53
PDGFC-208ENST00000512711 H3BUA1 57 aa-0.76□□□□□ -2.53
PDGFC-208ENST00000512711 M0R2Z0 102 aa-0.76□□□□□ -2.53
PDGFC-208ENST00000512711 NDUFA4O00483 81 aa-0.76□□□□□ -2.53
PDGFC-208ENST00000512711 IFI6P09912 130 aa-0.76□□□□□ -2.53
PDGFC-208ENST00000512711 ENHOQ6UWT2 76 aa-0.76□□□□□ -2.53
PDGFC-208ENST00000512711 PRO1933Q9H354 126 aa-0.76□□□□□ -2.53
PDGFC-208ENST00000512711 NDUFA4L2Q9NRX3 87 aa-0.76□□□□□ -2.53
PDGFC-208ENST00000512711 ANKRD36BQ8N2N9 1353 aa-0.76□□□□□ -2.53
PDGFC-208ENST00000512711 CLIP1P30622 1438 aa-0.76□□□□□ -2.53
PDGFC-208ENST00000512711 EPRSP07814 1512 aaKnown RBP-0.77□□□□□ -2.53
PDGFC-208ENST00000512711 ABCC2Q92887 1545 aa-0.77□□□□□ -2.53
PDGFC-208ENST00000512711 CCDC88BA6NC98 1476 aa-0.77□□□□□ -2.53
PDGFC-208ENST00000512711 CFTRP13569 1480 aa-0.77□□□□□ -2.53
PDGFC-208ENST00000512711 PZPP20742 1482 aa-0.77□□□□□ -2.53
PDGFC-208ENST00000512711 MYOM2P54296 1465 aa-0.77□□□□□ -2.53
PDGFC-208ENST00000512711 ANKRD30AQ9BXX3 1397 aa-0.77□□□□□ -2.53
PDGFC-208ENST00000512711 GNG14A0A1W2PPG7 69 aa-0.77□□□□□ -2.53
PDGFC-208ENST00000512711 GUCA1AP43080 201 aaPredicted RBP-0.77□□□□□ -2.53
PDGFC-208ENST00000512711 NMSQ5H8A3 153 aa-0.77□□□□□ -2.53
PDGFC-208ENST00000512711 BVES-AS1Q5T3Y7 98 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms