RNA–Protein interactions for RNA: ENST00000512380.1

PDLIM3-208, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 764 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-208ENST00000512380 UBE2D4Q9Y2X8 147 aa3.51□□□□□ -1.85
PDLIM3-208ENST00000512380 A0A087WTM6 91 aa3.5□□□□□ -1.85
PDLIM3-208ENST00000512380 LINC00959A0A1B0GUT2 108 aa3.5□□□□□ -1.85
PDLIM3-208ENST00000512380 CCL25O15444 150 aa3.5□□□□□ -1.85
PDLIM3-208ENST00000512380 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
PDLIM3-208ENST00000512380 RAB37Q96AX2 223 aa3.5□□□□□ -1.85
PDLIM3-208ENST00000512380 NAA38Q9BRA0 125 aaKnown RBP3.5□□□□□ -1.85
PDLIM3-208ENST00000512380 LINC01549A6NIU2 74 aa3.49□□□□□ -1.85
PDLIM3-208ENST00000512380 P0C880 135 aa3.49□□□□□ -1.85
PDLIM3-208ENST00000512380 TPRXLQ17RH7 258 aa3.49□□□□□ -1.85
PDLIM3-208ENST00000512380 KRTAP13-3Q3SY46 172 aa3.49□□□□□ -1.85
PDLIM3-208ENST00000512380 Q6ZRN7 208 aaPredicted RBP3.49□□□□□ -1.85
PDLIM3-208ENST00000512380 TMEM254Q8TBM7 123 aa3.49□□□□□ -1.85
PDLIM3-208ENST00000512380 C18orf32Q8TCD1 76 aa3.49□□□□□ -1.85
PDLIM3-208ENST00000512380 TMEM141Q96I45 108 aa3.49□□□□□ -1.85
PDLIM3-208ENST00000512380 CSMD3Q7Z407 3707 aa3.48□□□□□ -1.85
PDLIM3-208ENST00000512380 LINC01546A6NGU7 62 aa3.48□□□□□ -1.85
PDLIM3-208ENST00000512380 IGIPA6NJ69 53 aa3.48□□□□□ -1.85
PDLIM3-208ENST00000512380 TEN1Q86WV5 123 aa3.48□□□□□ -1.85
PDLIM3-208ENST00000512380 DPH3Q96FX2 82 aa3.48□□□□□ -1.85
PDLIM3-208ENST00000512380 DNAH7Q8WXX0 4024 aa3.47□□□□□ -1.85
PDLIM3-208ENST00000512380 TRACP01848 142 aa3.47□□□□□ -1.85
PDLIM3-208ENST00000512380 CIRBPQ14011 172 aaKnown RBP3.47□□□□□ -1.85
PDLIM3-208ENST00000512380 PMCHL1Q16048 86 aa3.47□□□□□ -1.85
PDLIM3-208ENST00000512380 KRTAP26-1Q6PEX3 210 aa3.47□□□□□ -1.85
PDLIM3-208ENST00000512380 Q6ZUT4 128 aa3.47□□□□□ -1.85
PDLIM3-208ENST00000512380 C5orf38Q86SI9 138 aa3.47□□□□□ -1.85
PDLIM3-208ENST00000512380 DYNC2H1Q8NCM8 4307 aaKnown RBP3.46□□□□□ -1.86
PDLIM3-208ENST00000512380 SEC11AP67812 179 aa3.46□□□□□ -1.86
PDLIM3-208ENST00000512380 COX6A2Q02221 97 aa3.46□□□□□ -1.86
PDLIM3-208ENST00000512380 FAM19A2Q8N3H0 131 aa3.46□□□□□ -1.86
PDLIM3-208ENST00000512380 STARD9Q9P2P6 4700 aa3.46□□□□□ -1.86
PDLIM3-208ENST00000512380 TRAV12-1A0A0B4J245 112 aa3.45□□□□□ -1.86
PDLIM3-208ENST00000512380 UBE2D1P51668 147 aa3.45□□□□□ -1.86
PDLIM3-208ENST00000512380 WFDC2Q14508 124 aa3.45□□□□□ -1.86
PDLIM3-208ENST00000512380 PLECQ15149 4684 aaKnown RBP3.45□□□□□ -1.86
PDLIM3-208ENST00000512380 SPACA4Q8TDM5 124 aa3.45□□□□□ -1.86
PDLIM3-208ENST00000512380 AMELXQ99217 191 aa3.45□□□□□ -1.86
PDLIM3-208ENST00000512380 NUPR1O60356 82 aa3.44□□□□□ -1.86
PDLIM3-208ENST00000512380 LEPROTL1O95214 131 aa3.44□□□□□ -1.86
PDLIM3-208ENST00000512380 IFI27L1Q96BM0 104 aa3.44□□□□□ -1.86
PDLIM3-208ENST00000512380 LINC00526Q96FQ7 95 aa3.43□□□□□ -1.86
PDLIM3-208ENST00000512380 TOMM7Q9P0U1 55 aa3.43□□□□□ -1.86
PDLIM3-208ENST00000512380 GVQW2A0A096LPI5 108 aaPredicted RBP3.42□□□□□ -1.86
PDLIM3-208ENST00000512380 H3BRM9 83 aa3.42□□□□□ -1.86
PDLIM3-208ENST00000512380 KRTAP10-1P60331 282 aa3.42□□□□□ -1.86
PDLIM3-208ENST00000512380 TMEM170BQ5T4T1 132 aa3.42□□□□□ -1.86
PDLIM3-208ENST00000512380 CDKN2A-AS1Q9UH64 79 aa3.42□□□□□ -1.86
PDLIM3-208ENST00000512380 VPS13DQ5THJ4 4388 aa3.42□□□□□ -1.86
PDLIM3-208ENST00000512380 ALMS1Q8TCU4 4167 aa3.41□□□□□ -1.86
PDLIM3-208ENST00000512380 LOC107984156A0A0G2JMH3 177 aa3.41□□□□□ -1.86
PDLIM3-208ENST00000512380 ERC2-IT1O76042 136 aa3.41□□□□□ -1.86
PDLIM3-208ENST00000512380 SPAG11BQ08648 103 aa3.41□□□□□ -1.86
PDLIM3-208ENST00000512380 Q1T7F1 81 aa3.41□□□□□ -1.86
PDLIM3-208ENST00000512380 ARL17AQ8IVW1 177 aa3.41□□□□□ -1.86
PDLIM3-208ENST00000512380 C12orf57Q99622 126 aa3.41□□□□□ -1.86
PDLIM3-208ENST00000512380 NDUFA1O15239 70 aa3.4□□□□□ -1.87
PDLIM3-208ENST00000512380 SPINK8P0C7L1 97 aa3.4□□□□□ -1.87
PDLIM3-208ENST00000512380 IGLC3P0DOY3 106 aa3.4□□□□□ -1.87
PDLIM3-208ENST00000512380 CNBPP62633 177 aaKnown RBP3.4□□□□□ -1.87
PDLIM3-208ENST00000512380 UNQ6190/PRO20217Q6UXQ8 127 aa3.4□□□□□ -1.87
PDLIM3-208ENST00000512380 DNAH1Q9P2D7 4330 aa3.39□□□□□ -1.87
PDLIM3-208ENST00000512380 KMT2AQ03164 3969 aa3.39□□□□□ -1.87
PDLIM3-208ENST00000512380 A0A087WSZ3 146 aa3.39□□□□□ -1.87
PDLIM3-208ENST00000512380 SPRR5A0A1B0GTR4 108 aa3.39□□□□□ -1.87
PDLIM3-208ENST00000512380 F8VRH5 84 aa3.39□□□□□ -1.87
PDLIM3-208ENST00000512380 KRTAP10-8P60410 259 aa3.39□□□□□ -1.87
PDLIM3-208ENST00000512380 KRTDAPP60985 99 aa3.39□□□□□ -1.87
PDLIM3-208ENST00000512380 C2orf82Q6UX34 121 aa3.39□□□□□ -1.87
PDLIM3-208ENST00000512380 COX7B2Q8TF08 81 aa3.39□□□□□ -1.87
PDLIM3-208ENST00000512380 MRPL35Q9NZE8 188 aaKnown RBP3.39□□□□□ -1.87
PDLIM3-208ENST00000512380 SACSQ9NZJ4 4579 aa3.39□□□□□ -1.87
PDLIM3-208ENST00000512380 KMT2CQ8NEZ4 4911 aaKnown RBP3.39□□□□□ -1.87
PDLIM3-208ENST00000512380 LYSTQ99698 3801 aa3.38□□□□□ -1.87
PDLIM3-208ENST00000512380 TRBV20-1A0A075B6N2 111 aa3.38□□□□□ -1.87
PDLIM3-208ENST00000512380 SYS1-DBNDD2H3BUS1 97 aa3.38□□□□□ -1.87
PDLIM3-208ENST00000512380 IGKCP01834 107 aa3.38□□□□□ -1.87
PDLIM3-208ENST00000512380 SMR3BP02814 79 aaPredicted RBP3.38□□□□□ -1.87
PDLIM3-208ENST00000512380 OCIAD2Q56VL3 154 aa3.38□□□□□ -1.87
PDLIM3-208ENST00000512380 Q8IZM0 81 aa3.38□□□□□ -1.87
PDLIM3-208ENST00000512380 LINC00474Q9P2X8 69 aa3.38□□□□□ -1.87
PDLIM3-208ENST00000512380 PRO0461Q9UI25 63 aa3.38□□□□□ -1.87
PDLIM3-208ENST00000512380 HYDINQ4G0P3 5121 aa3.37□□□□□ -1.87
PDLIM3-208ENST00000512380 TRBV30A0A0K0K1B3 111 aa3.37□□□□□ -1.87
PDLIM3-208ENST00000512380 PLNP26678 52 aa3.37□□□□□ -1.87
PDLIM3-208ENST00000512380 HAMPP81172 84 aa3.37□□□□□ -1.87
PDLIM3-208ENST00000512380 C9orf116Q5BN46 136 aaPredicted RBP3.37□□□□□ -1.87
PDLIM3-208ENST00000512380 PMCHL2Q9BQD1 86 aa3.37□□□□□ -1.87
PDLIM3-208ENST00000512380 C20orf202A1L168 122 aa3.36□□□□□ -1.87
PDLIM3-208ENST00000512380 C3orf79P0CE67 100 aa3.36□□□□□ -1.87
PDLIM3-208ENST00000512380 LINC00158P58513 81 aa3.36□□□□□ -1.87
PDLIM3-208ENST00000512380 ATOH7Q8N100 152 aa3.36□□□□□ -1.87
PDLIM3-208ENST00000512380 ZNF625Q96I27 306 aaPredicted RBP3.36□□□□□ -1.87
PDLIM3-208ENST00000512380 C6orf48Q9UBA6 75 aa3.36□□□□□ -1.87
PDLIM3-208ENST00000512380 A0A096LNI7 61 aa3.35□□□□□ -1.87
PDLIM3-208ENST00000512380 MYMXA0A1B0GTQ4 84 aa3.35□□□□□ -1.87
PDLIM3-208ENST00000512380 ASB16-AS1Q495Z4 193 aa3.35□□□□□ -1.87
PDLIM3-208ENST00000512380 MEIG1Q5JSS6 88 aa3.35□□□□□ -1.87
PDLIM3-208ENST00000512380 C1orf137Q5JT78 98 aa3.35□□□□□ -1.87
PDLIM3-208ENST00000512380 CASC2Q6XLA1 102 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms