RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 ATP5EP56381 51 aaPredicted RBP5.78□□□□□ -1.48
CPNE4-210ENST00000512332 A0A0U1RQV1 116 aa5.78□□□□□ -1.48
CPNE4-210ENST00000512332 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.77□□□□□ -1.49
CPNE4-210ENST00000512332 NBDYA0A0U1RRE5 68 aa5.77□□□□□ -1.49
CPNE4-210ENST00000512332 LCE6AA0A183 80 aa5.76□□□□□ -1.49
CPNE4-210ENST00000512332 NUPR2A6NF83 97 aa5.76□□□□□ -1.49
CPNE4-210ENST00000512332 HIGD2AQ9BW72 106 aa5.76□□□□□ -1.49
CPNE4-210ENST00000512332 Q6ZRN7 208 aaPredicted RBP5.75□□□□□ -1.49
CPNE4-210ENST00000512332 PHF5AQ7RTV0 110 aaKnown RBP5.75□□□□□ -1.49
CPNE4-210ENST00000512332 CHTF8P0CG12 524 aa5.75□□□□□ -1.49
CPNE4-210ENST00000512332 UBE2AP49459 152 aa5.75□□□□□ -1.49
CPNE4-210ENST00000512332 COL7A1Q02388 2944 aa5.75□□□□□ -1.49
CPNE4-210ENST00000512332 KRTAP11-1Q8IUC1 163 aa5.75□□□□□ -1.49
CPNE4-210ENST00000512332 K7EQZ3 153 aa5.74□□□□□ -1.49
CPNE4-210ENST00000512332 DNAH9Q9NYC9 4486 aa5.74□□□□□ -1.49
CPNE4-210ENST00000512332 DYNC2H1Q8NCM8 4307 aaKnown RBP5.73□□□□□ -1.49
CPNE4-210ENST00000512332 MDFIQ99750 246 aa5.73□□□□□ -1.49
CPNE4-210ENST00000512332 HCG22E2RYF7 251 aa5.72□□□□□ -1.49
CPNE4-210ENST00000512332 A0A087WSZ3 146 aa5.72□□□□□ -1.49
CPNE4-210ENST00000512332 Q5XG85 94 aa5.72□□□□□ -1.49
CPNE4-210ENST00000512332 KRTAP13-1Q8IUC0 172 aa5.72□□□□□ -1.49
CPNE4-210ENST00000512332 A0A0G2JQZ4 141 aa5.71□□□□□ -1.49
CPNE4-210ENST00000512332 DNAH10Q8IVF4 4471 aa5.71□□□□□ -1.5
CPNE4-210ENST00000512332 C5orf47Q569G3 176 aa5.71□□□□□ -1.5
CPNE4-210ENST00000512332 FAM30AQ9NZY2 134 aa5.71□□□□□ -1.5
CPNE4-210ENST00000512332 SMIM26A0A096LP01 95 aa5.69□□□□□ -1.5
CPNE4-210ENST00000512332 SPACA4Q8TDM5 124 aa5.69□□□□□ -1.5
CPNE4-210ENST00000512332 ZCCHC13Q8WW36 166 aaKnown RBP5.69□□□□□ -1.5
CPNE4-210ENST00000512332 LYSTQ99698 3801 aa5.69□□□□□ -1.5
CPNE4-210ENST00000512332 PANO1I0J062 215 aa5.68□□□□□ -1.5
CPNE4-210ENST00000512332 LINC00472Q9H8W2 130 aa5.68□□□□□ -1.5
CPNE4-210ENST00000512332 KRTAP29-1A8MX34 341 aaPredicted RBP5.67□□□□□ -1.5
CPNE4-210ENST00000512332 A0A087WTM6 91 aa5.66□□□□□ -1.5
CPNE4-210ENST00000512332 RPL37AP61513 92 aaKnown RBP5.66□□□□□ -1.5
CPNE4-210ENST00000512332 C4orf26Q17RF5 130 aa5.66□□□□□ -1.5
CPNE4-210ENST00000512332 PRR15Q8IV56 129 aa5.66□□□□□ -1.5
CPNE4-210ENST00000512332 CSMD3Q7Z407 3707 aa5.66□□□□□ -1.5
CPNE4-210ENST00000512332 TENM2Q9NT68 2774 aa5.66□□□□□ -1.5
CPNE4-210ENST00000512332 A8MWP4 228 aa5.66□□□□□ -1.5
CPNE4-210ENST00000512332 DEFB116Q30KQ4 102 aa5.66□□□□□ -1.5
CPNE4-210ENST00000512332 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.66□□□□□ -1.5
CPNE4-210ENST00000512332 LINC00483Q53H64 154 aa5.64□□□□□ -1.51
CPNE4-210ENST00000512332 PLECQ15149 4684 aaKnown RBP5.63□□□□□ -1.51
CPNE4-210ENST00000512332 Q6ZR54 194 aa5.63□□□□□ -1.51
CPNE4-210ENST00000512332 FP248Q71RG6 208 aaPredicted RBP5.63□□□□□ -1.51
CPNE4-210ENST00000512332 DNAH7Q8WXX0 4024 aa5.63□□□□□ -1.51
CPNE4-210ENST00000512332 WFDC13Q8IUB5 93 aa5.63□□□□□ -1.51
CPNE4-210ENST00000512332 NDUFB1O75438 58 aa5.62□□□□□ -1.51
CPNE4-210ENST00000512332 CASC2Q6XLA1 102 aa5.62□□□□□ -1.51
CPNE4-210ENST00000512332 ZNF706Q9Y5V0 76 aaPredicted RBP5.62□□□□□ -1.51
CPNE4-210ENST00000512332 H3BPC8 53 aa5.62□□□□□ -1.51
CPNE4-210ENST00000512332 MP68P56378 58 aa5.62□□□□□ -1.51
CPNE4-210ENST00000512332 HRCT1Q6UXD1 115 aa5.62□□□□□ -1.51
CPNE4-210ENST00000512332 PLAC8Q9NZF1 115 aa5.61□□□□□ -1.51
CPNE4-210ENST00000512332 SRRM2Q9UQ35 2752 aaKnown RBP5.61□□□□□ -1.51
CPNE4-210ENST00000512332 RTL8CO15255 209 aa5.6□□□□□ -1.51
CPNE4-210ENST00000512332 IGLV5-52A0A0A0MRZ9 124 aa5.6□□□□□ -1.51
CPNE4-210ENST00000512332 CYP4F30PQ9H0H9 118 aa5.59□□□□□ -1.51
CPNE4-210ENST00000512332 VPS13DQ5THJ4 4388 aa5.59□□□□□ -1.51
CPNE4-210ENST00000512332 PSORS1C2Q9UIG4 136 aa5.59□□□□□ -1.52
CPNE4-210ENST00000512332 hDV103S1A0JD37 113 aa5.58□□□□□ -1.52
CPNE4-210ENST00000512332 Q96NJ1 140 aa5.58□□□□□ -1.52
CPNE4-210ENST00000512332 TRAV22A0A0B4J277 110 aa5.58□□□□□ -1.52
CPNE4-210ENST00000512332 ZNF861PO60384 105 aa5.58□□□□□ -1.52
CPNE4-210ENST00000512332 WWC2-AS2Q96NR7 200 aa5.58□□□□□ -1.52
CPNE4-210ENST00000512332 IGLV9-49A0A0B4J1Y8 123 aa5.57□□□□□ -1.52
CPNE4-210ENST00000512332 MMP24-AS1A0A0U1RRL7 71 aa5.57□□□□□ -1.52
CPNE4-210ENST00000512332 ASB16-AS1Q495Z4 193 aa5.57□□□□□ -1.52
CPNE4-210ENST00000512332 LCE2BO14633 110 aa5.56□□□□□ -1.52
CPNE4-210ENST00000512332 FAM229BQ4G0N7 80 aa5.56□□□□□ -1.52
CPNE4-210ENST00000512332 STARD9Q9P2P6 4700 aa5.56□□□□□ -1.52
CPNE4-210ENST00000512332 LINC00208Q96KT6 92 aa5.56□□□□□ -1.52
CPNE4-210ENST00000512332 H0Y9P7 68 aa5.55□□□□□ -1.52
CPNE4-210ENST00000512332 C1orf134Q5TEV5 83 aa5.55□□□□□ -1.52
CPNE4-210ENST00000512332 SPANXA2-OT1Q8N9U9 137 aa5.55□□□□□ -1.52
CPNE4-210ENST00000512332 C1orf64Q8NEQ6 169 aa5.55□□□□□ -1.52
CPNE4-210ENST00000512332 MOBPQ13875 183 aa5.55□□□□□ -1.52
CPNE4-210ENST00000512332 TP53AIP1Q9HCN2 124 aa5.54□□□□□ -1.52
CPNE4-210ENST00000512332 PRKDCP78527 4128 aaKnown RBP5.53□□□□□ -1.52
CPNE4-210ENST00000512332 KRTAP4-8Q9BYQ9 185 aa5.51□□□□□ -1.53
CPNE4-210ENST00000512332 C8orf17Q9NRJ1 99 aa5.51□□□□□ -1.53
CPNE4-210ENST00000512332 A0A1B0GVX0 72 aa5.51□□□□□ -1.53
CPNE4-210ENST00000512332 IGLV7-43P04211 117 aa5.51□□□□□ -1.53
CPNE4-210ENST00000512332 Q1T7F1 81 aa5.51□□□□□ -1.53
CPNE4-210ENST00000512332 LINC00336Q6ZUF6 198 aa5.51□□□□□ -1.53
CPNE4-210ENST00000512332 HECTD4Q9Y4D8 3996 aa5.5□□□□□ -1.53
CPNE4-210ENST00000512332 MPLKIPQ8TAP9 179 aa5.5□□□□□ -1.53
CPNE4-210ENST00000512332 CD164Q04900 197 aa5.49□□□□□ -1.53
CPNE4-210ENST00000512332 PRO0628Q9UI54 55 aa5.49□□□□□ -1.53
CPNE4-210ENST00000512332 DNAH17Q9UFH2 4485 aa5.49□□□□□ -1.53
CPNE4-210ENST00000512332 CDK2AP2O75956 126 aa5.48□□□□□ -1.53
CPNE4-210ENST00000512332 ANAPC11Q9NYG5 84 aa5.48□□□□□ -1.53
CPNE4-210ENST00000512332 MEGF8Q7Z7M0 2845 aa5.47□□□□□ -1.53
CPNE4-210ENST00000512332 PRR4Q16378 134 aa5.47□□□□□ -1.53
CPNE4-210ENST00000512332 SSBP3-AS1Q7Z2R9 100 aa5.47□□□□□ -1.53
CPNE4-210ENST00000512332 KMT2AQ03164 3969 aa5.47□□□□□ -1.53
CPNE4-210ENST00000512332 IGHV6-1A0A0B4J1U7 121 aa5.47□□□□□ -1.53
CPNE4-210ENST00000512332 IGLV7-46A0A075B6I9 117 aa5.46□□□□□ -1.54
CPNE4-210ENST00000512332 LY6G6CO95867 125 aa5.46□□□□□ -1.54
CPNE4-210ENST00000512332 MRPL34Q9BQ48 92 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms