RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 PDE6GP18545 87 aa5.61□□□□□ -1.51
NR1I3-228ENST00000511676 FUSP35637 526 aaKnown RBP eCLIP5.61□□□□□ -1.51
NR1I3-228ENST00000511676 SCXQ7RTU7 201 aa5.61□□□□□ -1.51
NR1I3-228ENST00000511676 KRTAP11-1Q8IUC1 163 aa5.61□□□□□ -1.51
NR1I3-228ENST00000511676 SPRR1BP22528 89 aa5.6□□□□□ -1.51
NR1I3-228ENST00000511676 FAM30AQ9NZY2 134 aa5.6□□□□□ -1.51
NR1I3-228ENST00000511676 PSORS1C2Q9UIG4 136 aa5.6□□□□□ -1.51
NR1I3-228ENST00000511676 FLG2Q5D862 2391 aaPredicted RBP5.59□□□□□ -1.51
NR1I3-228ENST00000511676 TEX49A0A1B0GTD5 131 aa5.59□□□□□ -1.51
NR1I3-228ENST00000511676 FAM240AA0A1B0GVK7 77 aa5.59□□□□□ -1.51
NR1I3-228ENST00000511676 RPL37AP61513 92 aaKnown RBP5.59□□□□□ -1.51
NR1I3-228ENST00000511676 ZNF706Q9Y5V0 76 aaPredicted RBP5.59□□□□□ -1.51
NR1I3-228ENST00000511676 ZNF861PO60384 105 aa5.58□□□□□ -1.52
NR1I3-228ENST00000511676 LINC01547P58512 204 aaPredicted RBP5.58□□□□□ -1.52
NR1I3-228ENST00000511676 PRLHP81277 87 aa5.58□□□□□ -1.52
NR1I3-228ENST00000511676 DNAH8Q96JB1 4490 aa5.57□□□□□ -1.52
NR1I3-228ENST00000511676 LOC110117498A0A087WWA1 95 aa5.57□□□□□ -1.52
NR1I3-228ENST00000511676 ACYP1P07311 99 aa5.57□□□□□ -1.52
NR1I3-228ENST00000511676 NDUFV3P56181 108 aaKnown RBP5.57□□□□□ -1.52
NR1I3-228ENST00000511676 Q8N377 158 aa5.57□□□□□ -1.52
NR1I3-228ENST00000511676 HIGD2AQ9BW72 106 aa5.57□□□□□ -1.52
NR1I3-228ENST00000511676 LAMTOR3Q9UHA4 124 aa5.57□□□□□ -1.52
NR1I3-228ENST00000511676 HERC1Q15751 4861 aa5.57□□□□□ -1.52
NR1I3-228ENST00000511676 A0A1B0GW54 56 aa5.56□□□□□ -1.52
NR1I3-228ENST00000511676 ERC2-IT1O76042 136 aa5.56□□□□□ -1.52
NR1I3-228ENST00000511676 IGLV7-43P04211 117 aa5.56□□□□□ -1.52
NR1I3-228ENST00000511676 RBM3P98179 157 aaKnown RBP5.56□□□□□ -1.52
NR1I3-228ENST00000511676 C1orf137Q5JT78 98 aa5.56□□□□□ -1.52
NR1I3-228ENST00000511676 IGLV8-61A0A075B6I0 122 aa5.55□□□□□ -1.52
NR1I3-228ENST00000511676 LINC00483Q53H64 154 aa5.55□□□□□ -1.52
NR1I3-228ENST00000511676 VPS13BQ7Z7G8 4022 aa5.54□□□□□ -1.52
NR1I3-228ENST00000511676 TRBV7-4A0A0J9YYF1 115 aa5.54□□□□□ -1.52
NR1I3-228ENST00000511676 F8WEM9 126 aa5.54□□□□□ -1.52
NR1I3-228ENST00000511676 DSCR8Q96T75 97 aa5.54□□□□□ -1.52
NR1I3-228ENST00000511676 HAMPP81172 84 aa5.53□□□□□ -1.52
NR1I3-228ENST00000511676 ST20-AS1Q8NBB2 130 aa5.53□□□□□ -1.52
NR1I3-228ENST00000511676 SPRR4Q96PI1 79 aa5.53□□□□□ -1.52
NR1I3-228ENST00000511676 CCKP06307 115 aa5.52□□□□□ -1.53
NR1I3-228ENST00000511676 XP32Q5T750 250 aa5.52□□□□□ -1.53
NR1I3-228ENST00000511676 Q6ZQT0 140 aa5.52□□□□□ -1.53
NR1I3-228ENST00000511676 SMIM29Q86T20 159 aa5.52□□□□□ -1.53
NR1I3-228ENST00000511676 C14orf132Q9NPU4 83 aa5.52□□□□□ -1.53
NR1I3-228ENST00000511676 FAT1Q14517 4588 aa5.52□□□□□ -1.53
NR1I3-228ENST00000511676 Q6JHZ5 121 aa5.51□□□□□ -1.53
NR1I3-228ENST00000511676 DEFB105AQ8NG35 78 aa5.51□□□□□ -1.53
NR1I3-228ENST00000511676 MYCBP2O75592 4640 aa5.51□□□□□ -1.53
NR1I3-228ENST00000511676 FAM229BQ4G0N7 80 aa5.49□□□□□ -1.53
NR1I3-228ENST00000511676 GAGE2AQ6NT46 116 aa5.48□□□□□ -1.53
NR1I3-228ENST00000511676 Q6Q795 121 aa5.48□□□□□ -1.53
NR1I3-228ENST00000511676 SPINK6Q6UWN8 80 aa5.47□□□□□ -1.53
NR1I3-228ENST00000511676 C3orf22Q8N5N4 141 aa5.46□□□□□ -1.54
NR1I3-228ENST00000511676 Q8NBF4 154 aa5.46□□□□□ -1.54
NR1I3-228ENST00000511676 CRYGAP11844 174 aa5.44□□□□□ -1.54
NR1I3-228ENST00000511676 KRTAP10-4P60372 401 aaPredicted RBP5.44□□□□□ -1.54
NR1I3-228ENST00000511676 ATP5EP2Q5VTU8 51 aa5.44□□□□□ -1.54
NR1I3-228ENST00000511676 UBL5Q9BZL1 73 aa5.44□□□□□ -1.54
NR1I3-228ENST00000511676 TRBV7-7A0A0K0K1E9 115 aa5.43□□□□□ -1.54
NR1I3-228ENST00000511676 IGFL1Q6UW32 110 aa5.43□□□□□ -1.54
NR1I3-228ENST00000511676 SSBP3-AS1Q7Z2R9 100 aa5.43□□□□□ -1.54
NR1I3-228ENST00000511676 LINC00643Q86TS7 51 aa5.43□□□□□ -1.54
NR1I3-228ENST00000511676 VPS25Q9BRG1 176 aa5.43□□□□□ -1.54
NR1I3-228ENST00000511676 A0A1B0GV72 72 aa5.42□□□□□ -1.54
NR1I3-228ENST00000511676 CD164Q04900 197 aa5.42□□□□□ -1.54
NR1I3-228ENST00000511676 LINC00846Q9NV44 126 aa5.42□□□□□ -1.54
NR1I3-228ENST00000511676 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
NR1I3-228ENST00000511676 A0A1W2PNM2 257 aa5.41□□□□□ -1.54
NR1I3-228ENST00000511676 KRTAP1-4P0C5Y4 121 aa5.41□□□□□ -1.54
NR1I3-228ENST00000511676 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
NR1I3-228ENST00000511676 IMUPQ9GZP8 106 aa5.4□□□□□ -1.54
NR1I3-228ENST00000511676 C9orf153Q5TBE3 101 aa5.39□□□□□ -1.55
NR1I3-228ENST00000511676 IGLV9-49A0A0B4J1Y8 123 aa5.38□□□□□ -1.55
NR1I3-228ENST00000511676 A0A0U1RQV1 116 aa5.38□□□□□ -1.55
NR1I3-228ENST00000511676 CXCL6P80162 114 aa5.38□□□□□ -1.55
NR1I3-228ENST00000511676 MOBPQ13875 183 aa5.38□□□□□ -1.55
NR1I3-228ENST00000511676 Q6ZVQ6 151 aa5.38□□□□□ -1.55
NR1I3-228ENST00000511676 SIGMAR1Q99720 223 aa5.38□□□□□ -1.55
NR1I3-228ENST00000511676 SS18L2Q9UHA2 77 aa5.38□□□□□ -1.55
NR1I3-228ENST00000511676 NREPQ16612 68 aa5.37□□□□□ -1.55
NR1I3-228ENST00000511676 Q5XG85 94 aa5.36□□□□□ -1.55
NR1I3-228ENST00000511676 MT1HL1P0DM35 61 aa5.35□□□□□ -1.55
NR1I3-228ENST00000511676 RPS29P62273 56 aaKnown RBP5.35□□□□□ -1.55
NR1I3-228ENST00000511676 KRTAP13-2Q52LG2 175 aa5.35□□□□□ -1.55
NR1I3-228ENST00000511676 A0A087X002 238 aa5.34□□□□□ -1.55
NR1I3-228ENST00000511676 ASB16-AS1Q495Z4 193 aa5.34□□□□□ -1.55
NR1I3-228ENST00000511676 ANAPC11Q9NYG5 84 aa5.34□□□□□ -1.55
NR1I3-228ENST00000511676 A0A087WSZ3 146 aa5.33□□□□□ -1.56
NR1I3-228ENST00000511676 J3KT08 172 aa5.33□□□□□ -1.56
NR1I3-228ENST00000511676 SPAG11AQ6PDA7 123 aa5.33□□□□□ -1.56
NR1I3-228ENST00000511676 MT-ATP8P03928 68 aa5.32□□□□□ -1.56
NR1I3-228ENST00000511676 SCGB1A1P11684 91 aa5.32□□□□□ -1.56
NR1I3-228ENST00000511676 TYMSOSQ8TAI1 123 aa5.32□□□□□ -1.56
NR1I3-228ENST00000511676 BPY2O14599 106 aa5.31□□□□□ -1.56
NR1I3-228ENST00000511676 SPINK1P00995 79 aa5.31□□□□□ -1.56
NR1I3-228ENST00000511676 KRTAP10-8P60410 259 aa5.31□□□□□ -1.56
NR1I3-228ENST00000511676 LIMD2Q9BT23 127 aa5.31□□□□□ -1.56
NR1I3-228ENST00000511676 LRP1Q07954 4544 aaKnown RBP5.3□□□□□ -1.56
NR1I3-228ENST00000511676 LINC00472Q9H8W2 130 aa5.29□□□□□ -1.56
NR1I3-228ENST00000511676 PKHD1L1Q86WI1 4243 aa5.28□□□□□ -1.56
NR1I3-228ENST00000511676 A0A0G2JQZ4 141 aa5.28□□□□□ -1.56
NR1I3-228ENST00000511676 HMCN2Q8NDA2 5059 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms