RNA–Protein interactions for RNA: ENST00000511424.5

LIMCH1-212, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-212ENST00000511424 IBA57-AS1B1ANH7 110 aa1.47□□□□□ -2.17
LIMCH1-212ENST00000511424 F8VRH5 84 aa1.47□□□□□ -2.17
LIMCH1-212ENST00000511424 J3QQQ9 107 aa1.47□□□□□ -2.17
LIMCH1-212ENST00000511424 K7ERJ3 54 aa1.47□□□□□ -2.17
LIMCH1-212ENST00000511424 UQCRQO14949 82 aa1.47□□□□□ -2.17
LIMCH1-212ENST00000511424 DPM2O94777 84 aa1.47□□□□□ -2.17
LIMCH1-212ENST00000511424 SMIM13P0DJ93 91 aa1.47□□□□□ -2.17
LIMCH1-212ENST00000511424 MRPS36P82909 103 aaKnown RBP1.47□□□□□ -2.17
LIMCH1-212ENST00000511424 LINC01556Q5JQF7 62 aa1.47□□□□□ -2.17
LIMCH1-212ENST00000511424 C1orf195Q5TG92 126 aa1.47□□□□□ -2.17
LIMCH1-212ENST00000511424 Q5W150 140 aa1.47□□□□□ -2.17
LIMCH1-212ENST00000511424 Q6ZRU5 148 aa1.47□□□□□ -2.17
LIMCH1-212ENST00000511424 UBE2DNLQ8IWF7 75 aa1.47□□□□□ -2.17
LIMCH1-212ENST00000511424 C3orf22Q8N5N4 141 aa1.47□□□□□ -2.17
LIMCH1-212ENST00000511424 CARD19Q96LW7 228 aa1.47□□□□□ -2.17
LIMCH1-212ENST00000511424 TIMM21Q9BVV7 248 aa1.47□□□□□ -2.17
LIMCH1-212ENST00000511424 SPANXDQ9BXN6 97 aa1.47□□□□□ -2.17
LIMCH1-212ENST00000511424 C6orf48Q9UBA6 75 aa1.47□□□□□ -2.17
LIMCH1-212ENST00000511424 VPS13BQ7Z7G8 4022 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 FAM236DA0A1B0GTK5 79 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 FAM236AA0A1B0GUQ0 79 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 FAM236BA0A1B0GV22 79 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 A0A1W2PNN7 141 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 C8orf87E5RJ46 101 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 H3BNG1 76 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 LEPROTO15243 131 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 SNCGO76070 127 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 PPP1R17O96001 155 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 FAM236CP0DP71 79 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 PSMB2P49721 201 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 FXYD2P54710 66 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 CCL18P55774 89 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 HIST1H4AP62805 103 aaKnown RBP1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 C9orf153Q5TBE3 101 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 SFTA2Q6UW10 78 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 FAM19A3Q7Z5A8 133 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 C15orf53Q8NAA6 179 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 DPH3Q96FX2 82 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 XAGE1AQ9HD64 81 aa1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 ZNF706Q9Y5V0 76 aaPredicted RBP1.46□□□□□ -2.18
LIMCH1-212ENST00000511424 BIRC6Q9NR09 4857 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 MYCBP2O75592 4640 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 A0A087WTM6 91 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 A0A096LNI7 61 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 IGHV1-58A0A0C4DH39 117 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 LCE6AA0A183 80 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 NUPR2A6NF83 97 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 ZNF815PA8K554 130 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 COX7A2LO14548 114 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 COX7CP15954 63 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 SPAG11BQ08648 103 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 SS18Q15532 418 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 LUZP6Q538Z0 58 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 MUSTN1Q8IVN3 82 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 ANKRD29Q8N6D5 301 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 COX7B2Q8TF08 81 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 RAB37Q96AX2 223 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 RMI2Q96E14 147 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 UPK3BQ9BT76 320 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 IMUPQ9GZP8 106 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 NDUFA12Q9UI09 145 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 PKIGQ9Y2B9 76 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 HERC2O95714 4834 aa1.45□□□□□ -2.18
LIMCH1-212ENST00000511424 IGKV2-24A0A0C4DH68 120 aa1.44□□□□□ -2.18
LIMCH1-212ENST00000511424 MYMXA0A1B0GTQ4 84 aa1.44□□□□□ -2.18
LIMCH1-212ENST00000511424 NCR3O14931 201 aa1.44□□□□□ -2.18
LIMCH1-212ENST00000511424 CRPP02741 224 aa1.44□□□□□ -2.18
LIMCH1-212ENST00000511424 SMR3BP02814 79 aaPredicted RBP1.44□□□□□ -2.18
LIMCH1-212ENST00000511424 LINC00158P58513 81 aa1.44□□□□□ -2.18
LIMCH1-212ENST00000511424 MOBPQ13875 183 aa1.44□□□□□ -2.18
LIMCH1-212ENST00000511424 SDIM1Q6ZPB5 146 aa1.44□□□□□ -2.18
LIMCH1-212ENST00000511424 PHF5AQ7RTV0 110 aaKnown RBP1.44□□□□□ -2.18
LIMCH1-212ENST00000511424 MIR7-3HGQ8N6C7 128 aa1.44□□□□□ -2.18
LIMCH1-212ENST00000511424 CYSTM1Q9H1C7 97 aa1.44□□□□□ -2.18
LIMCH1-212ENST00000511424 ABCA13Q86UQ4 5058 aa1.43□□□□□ -2.18
LIMCH1-212ENST00000511424 TNXBP22105 4242 aa1.43□□□□□ -2.18
LIMCH1-212ENST00000511424 GVQW2A0A096LPI5 108 aaPredicted RBP1.43□□□□□ -2.18
LIMCH1-212ENST00000511424 A0A0G2JQZ4 141 aa1.43□□□□□ -2.18
LIMCH1-212ENST00000511424 SPRR5A0A1B0GTR4 108 aa1.43□□□□□ -2.18
LIMCH1-212ENST00000511424 C3orf84H3BNL1 204 aa1.43□□□□□ -2.18
LIMCH1-212ENST00000511424 H7C2G1 150 aa1.43□□□□□ -2.18
LIMCH1-212ENST00000511424 NDUFA1O15239 70 aa1.43□□□□□ -2.18
LIMCH1-212ENST00000511424 LGALS3P17931 250 aaKnown RBP1.43□□□□□ -2.18
LIMCH1-212ENST00000511424 PLNP26678 52 aa1.43□□□□□ -2.18
LIMCH1-212ENST00000511424 MIAQ16674 131 aa1.43□□□□□ -2.18
LIMCH1-212ENST00000511424 C1orf134Q5TEV5 83 aa1.43□□□□□ -2.18
LIMCH1-212ENST00000511424 LYRM7Q5U5X0 104 aa1.43□□□□□ -2.18
LIMCH1-212ENST00000511424 PRR15Q8IV56 129 aa1.43□□□□□ -2.18
LIMCH1-212ENST00000511424 LINC00308Q8TCZ7 52 aa1.43□□□□□ -2.18
LIMCH1-212ENST00000511424 DSCR8Q96T75 97 aa1.43□□□□□ -2.18
LIMCH1-212ENST00000511424 NHP2Q9NX24 153 aaKnown RBP1.43□□□□□ -2.18
LIMCH1-212ENST00000511424 ATOX1O00244 68 aa1.42□□□□□ -2.18
LIMCH1-212ENST00000511424 PSCAO43653 123 aa1.42□□□□□ -2.18
LIMCH1-212ENST00000511424 ERC2-IT1O76042 136 aa1.42□□□□□ -2.18
LIMCH1-212ENST00000511424 TCL1BO95988 128 aa1.42□□□□□ -2.18
LIMCH1-212ENST00000511424 PMAIP1Q13794 54 aa1.42□□□□□ -2.18
LIMCH1-212ENST00000511424 FP248Q71RG6 208 aaPredicted RBP1.42□□□□□ -2.18
LIMCH1-212ENST00000511424 Q8IZM0 81 aa1.42□□□□□ -2.18
LIMCH1-212ENST00000511424 Q8N814 137 aa1.42□□□□□ -2.18
LIMCH1-212ENST00000511424 SERP1Q9Y6X1 66 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms