RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 BIRC6Q9NR09 4857 aa4.84□□□□□ -1.63
SMAD1-209ENST00000511125 INAFM2P0DMQ5 153 aa4.84□□□□□ -1.64
SMAD1-209ENST00000511125 SPRR4Q96PI1 79 aa4.84□□□□□ -1.64
SMAD1-209ENST00000511125 A0A087X002 238 aa4.83□□□□□ -1.64
SMAD1-209ENST00000511125 NDUFV3P56181 108 aaKnown RBP4.83□□□□□ -1.64
SMAD1-209ENST00000511125 MOBPQ13875 183 aa4.83□□□□□ -1.64
SMAD1-209ENST00000511125 PRR26Q8N8Z3 221 aa4.83□□□□□ -1.64
SMAD1-209ENST00000511125 H0Y9J4 135 aa4.82□□□□□ -1.64
SMAD1-209ENST00000511125 DMBT1Q9UGM3 2413 aaPredicted RBP4.82□□□□□ -1.64
SMAD1-209ENST00000511125 TMEM256-PLSCR3K7ERE1 68 aa4.82□□□□□ -1.64
SMAD1-209ENST00000511125 KRTAP10-4P60372 401 aaPredicted RBP4.82□□□□□ -1.64
SMAD1-209ENST00000511125 F8W1H4 67 aa4.81□□□□□ -1.64
SMAD1-209ENST00000511125 SMIM29Q86T20 159 aa4.81□□□□□ -1.64
SMAD1-209ENST00000511125 F8WEM9 126 aa4.8□□□□□ -1.64
SMAD1-209ENST00000511125 Q8N1X5 172 aa4.8□□□□□ -1.64
SMAD1-209ENST00000511125 ABCA13Q86UQ4 5058 aa4.8□□□□□ -1.64
SMAD1-209ENST00000511125 A0A1B0GX51 115 aa4.8□□□□□ -1.64
SMAD1-209ENST00000511125 H3BT86 120 aa4.79□□□□□ -1.64
SMAD1-209ENST00000511125 RBM3P98179 157 aaKnown RBP4.79□□□□□ -1.64
SMAD1-209ENST00000511125 SPINK6Q6UWN8 80 aa4.78□□□□□ -1.64
SMAD1-209ENST00000511125 IGLV5-48A0A075B6I7 105 aa4.78□□□□□ -1.64
SMAD1-209ENST00000511125 KRTAP1-4P0C5Y4 121 aa4.78□□□□□ -1.64
SMAD1-209ENST00000511125 OCIAD2Q56VL3 154 aa4.78□□□□□ -1.64
SMAD1-209ENST00000511125 KRTAP13-2Q52LG2 175 aa4.78□□□□□ -1.64
SMAD1-209ENST00000511125 TEN1Q86WV5 123 aa4.78□□□□□ -1.64
SMAD1-209ENST00000511125 DSCR8Q96T75 97 aa4.78□□□□□ -1.64
SMAD1-209ENST00000511125 ZNF706Q9Y5V0 76 aaPredicted RBP4.77□□□□□ -1.65
SMAD1-209ENST00000511125 CCKP06307 115 aa4.77□□□□□ -1.65
SMAD1-209ENST00000511125 CRYGAP11844 174 aa4.76□□□□□ -1.65
SMAD1-209ENST00000511125 IGFL1Q6UW32 110 aa4.76□□□□□ -1.65
SMAD1-209ENST00000511125 TYMSOSQ8TAI1 123 aa4.76□□□□□ -1.65
SMAD1-209ENST00000511125 DEFB116Q30KQ4 102 aa4.76□□□□□ -1.65
SMAD1-209ENST00000511125 Q8NBF4 154 aa4.75□□□□□ -1.65
SMAD1-209ENST00000511125 HERC2O95714 4834 aa4.75□□□□□ -1.65
SMAD1-209ENST00000511125 GHRHP01286 108 aa4.73□□□□□ -1.65
SMAD1-209ENST00000511125 PPDPFLQ8WWR9 84 aa4.73□□□□□ -1.65
SMAD1-209ENST00000511125 A0A1W2PNM2 257 aa4.73□□□□□ -1.65
SMAD1-209ENST00000511125 JMJD7-PLA2G4BH0Y9G9 81 aa4.73□□□□□ -1.65
SMAD1-209ENST00000511125 PKHD1L1Q86WI1 4243 aa4.73□□□□□ -1.65
SMAD1-209ENST00000511125 LINC00483Q53H64 154 aa4.73□□□□□ -1.65
SMAD1-209ENST00000511125 PCLOQ9Y6V0 5065 aa4.73□□□□□ -1.65
SMAD1-209ENST00000511125 A0A087WSZ3 146 aa4.72□□□□□ -1.65
SMAD1-209ENST00000511125 SPRR1BP22528 89 aa4.72□□□□□ -1.65
SMAD1-209ENST00000511125 Q6ZQT0 140 aa4.71□□□□□ -1.65
SMAD1-209ENST00000511125 RETNLBQ9BQ08 111 aa4.71□□□□□ -1.65
SMAD1-209ENST00000511125 SVIPQ8NHG7 77 aa4.71□□□□□ -1.66
SMAD1-209ENST00000511125 TRBV7-4A0A0J9YYF1 115 aa4.7□□□□□ -1.66
SMAD1-209ENST00000511125 C4orf48Q5BLP8 95 aa4.7□□□□□ -1.66
SMAD1-209ENST00000511125 OBSCN-AS1Q96MR7 158 aa4.69□□□□□ -1.66
SMAD1-209ENST00000511125 LINC00846Q9NV44 126 aa4.69□□□□□ -1.66
SMAD1-209ENST00000511125 FAT3Q8TDW7 4589 aa4.69□□□□□ -1.66
SMAD1-209ENST00000511125 H3BQ85 93 aa4.68□□□□□ -1.66
SMAD1-209ENST00000511125 LINC00304Q8N9R0 145 aa4.68□□□□□ -1.66
SMAD1-209ENST00000511125 LINC01600Q96MT4 127 aa4.67□□□□□ -1.66
SMAD1-209ENST00000511125 J3QL48 77 aa4.66□□□□□ -1.66
SMAD1-209ENST00000511125 FAM229BQ4G0N7 80 aa4.66□□□□□ -1.66
SMAD1-209ENST00000511125 Q6JHZ5 121 aa4.66□□□□□ -1.66
SMAD1-209ENST00000511125 LOC110117498A0A087WWA1 95 aa4.66□□□□□ -1.66
SMAD1-209ENST00000511125 IGKV3D-7A0A0C4DH55 119 aa4.66□□□□□ -1.66
SMAD1-209ENST00000511125 SSBP3-AS1Q7Z2R9 100 aa4.66□□□□□ -1.66
SMAD1-209ENST00000511125 Q8N9L7 120 aa4.65□□□□□ -1.66
SMAD1-209ENST00000511125 TNXBP22105 4242 aa4.65□□□□□ -1.66
SMAD1-209ENST00000511125 K7ERU9 68 aa4.65□□□□□ -1.67
SMAD1-209ENST00000511125 NREPQ16612 68 aa4.65□□□□□ -1.67
SMAD1-209ENST00000511125 IGLV8-61A0A075B6I0 122 aa4.64□□□□□ -1.67
SMAD1-209ENST00000511125 J3QR89 54 aa4.64□□□□□ -1.67
SMAD1-209ENST00000511125 TRBV7-7A0A0K0K1E9 115 aa4.64□□□□□ -1.67
SMAD1-209ENST00000511125 MT1HL1P0DM35 61 aa4.63□□□□□ -1.67
SMAD1-209ENST00000511125 KRTAP10-8P60410 259 aa4.63□□□□□ -1.67
SMAD1-209ENST00000511125 Q6ZVQ6 151 aa4.63□□□□□ -1.67
SMAD1-209ENST00000511125 PDE6GP18545 87 aa4.62□□□□□ -1.67
SMAD1-209ENST00000511125 SIGMAR1Q99720 223 aa4.61□□□□□ -1.67
SMAD1-209ENST00000511125 UBL5Q9BZL1 73 aa4.61□□□□□ -1.67
SMAD1-209ENST00000511125 HERC1Q15751 4861 aa4.61□□□□□ -1.67
SMAD1-209ENST00000511125 IGKV4-1P06312 121 aa4.61□□□□□ -1.67
SMAD1-209ENST00000511125 CDIP1Q9H305 208 aa4.6□□□□□ -1.67
SMAD1-209ENST00000511125 BPY2O14599 106 aa4.59□□□□□ -1.67
SMAD1-209ENST00000511125 HIST1H4AP62805 103 aaKnown RBP4.59□□□□□ -1.67
SMAD1-209ENST00000511125 PRR4Q16378 134 aa4.59□□□□□ -1.67
SMAD1-209ENST00000511125 SPINK1P00995 79 aa4.59□□□□□ -1.68
SMAD1-209ENST00000511125 MT-ATP8P03928 68 aa4.59□□□□□ -1.68
SMAD1-209ENST00000511125 C9orf92A6NGG3 77 aa4.58□□□□□ -1.68
SMAD1-209ENST00000511125 A0A087WVE0 104 aa4.57□□□□□ -1.68
SMAD1-209ENST00000511125 IGHV6-1A0A0B4J1U7 121 aa4.57□□□□□ -1.68
SMAD1-209ENST00000511125 C1orf195Q5TG92 126 aa4.57□□□□□ -1.68
SMAD1-209ENST00000511125 K7EQZ3 153 aa4.55□□□□□ -1.68
SMAD1-209ENST00000511125 OXTP01178 125 aa4.55□□□□□ -1.68
SMAD1-209ENST00000511125 ACYP1P07311 99 aa4.55□□□□□ -1.68
SMAD1-209ENST00000511125 NOTCH2NLQ7Z3S9 236 aa4.55□□□□□ -1.68
SMAD1-209ENST00000511125 Q96NJ1 140 aa4.55□□□□□ -1.68
SMAD1-209ENST00000511125 SS18L2Q9UHA2 77 aa4.55□□□□□ -1.68
SMAD1-209ENST00000511125 LPAP08519 4548 aa4.55□□□□□ -1.68
SMAD1-209ENST00000511125 LIMD2Q9BT23 127 aa4.55□□□□□ -1.68
SMAD1-209ENST00000511125 LINC00472Q9H8W2 130 aa4.55□□□□□ -1.68
SMAD1-209ENST00000511125 SPAG11AQ6PDA7 123 aa4.55□□□□□ -1.68
SMAD1-209ENST00000511125 Q6Q795 121 aa4.55□□□□□ -1.68
SMAD1-209ENST00000511125 FAM240AA0A1B0GVK7 77 aa4.54□□□□□ -1.68
SMAD1-209ENST00000511125 KRTAP29-1A8MX34 341 aaPredicted RBP4.54□□□□□ -1.68
SMAD1-209ENST00000511125 WFDC13Q8IUB5 93 aa4.54□□□□□ -1.68
SMAD1-209ENST00000511125 DSCR10P59022 87 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms