RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 C9orf163Q8N9P6 203 aa6.9□□□□□ -1.31
SEC31A-228ENST00000509142 TMEM254Q8TBM7 123 aa6.9□□□□□ -1.31
SEC31A-228ENST00000509142 C5orf47Q569G3 176 aa6.89□□□□□ -1.31
SEC31A-228ENST00000509142 FP248Q71RG6 208 aaPredicted RBP6.88□□□□□ -1.31
SEC31A-228ENST00000509142 SMIM29Q86T20 159 aa6.88□□□□□ -1.31
SEC31A-228ENST00000509142 SERP1Q9Y6X1 66 aa6.88□□□□□ -1.31
SEC31A-228ENST00000509142 LINC00474Q9P2X8 69 aa6.88□□□□□ -1.31
SEC31A-228ENST00000509142 LRCOL1A6NCL2 159 aa6.87□□□□□ -1.31
SEC31A-228ENST00000509142 SPRR4Q96PI1 79 aa6.87□□□□□ -1.31
SEC31A-228ENST00000509142 A0A0U1RQV1 116 aa6.86□□□□□ -1.31
SEC31A-228ENST00000509142 DSCR10P59022 87 aa6.86□□□□□ -1.31
SEC31A-228ENST00000509142 IGFL1Q6UW32 110 aa6.86□□□□□ -1.31
SEC31A-228ENST00000509142 FAM229BQ4G0N7 80 aa6.84□□□□□ -1.31
SEC31A-228ENST00000509142 KRTAP11-1Q8IUC1 163 aa6.84□□□□□ -1.31
SEC31A-228ENST00000509142 A0A087WSZ3 146 aa6.84□□□□□ -1.31
SEC31A-228ENST00000509142 FAM30AQ9NZY2 134 aa6.84□□□□□ -1.31
SEC31A-228ENST00000509142 K7EQZ3 153 aa6.83□□□□□ -1.32
SEC31A-228ENST00000509142 DEFB116Q30KQ4 102 aa6.83□□□□□ -1.32
SEC31A-228ENST00000509142 Q6ZRN7 208 aaPredicted RBP6.81□□□□□ -1.32
SEC31A-228ENST00000509142 H0Y9J4 135 aa6.81□□□□□ -1.32
SEC31A-228ENST00000509142 NDUFC1O43677 76 aa6.81□□□□□ -1.32
SEC31A-228ENST00000509142 PLECQ15149 4684 aaKnown RBP6.81□□□□□ -1.32
SEC31A-228ENST00000509142 PANO1I0J062 215 aa6.8□□□□□ -1.32
SEC31A-228ENST00000509142 LCE6AA0A183 80 aa6.8□□□□□ -1.32
SEC31A-228ENST00000509142 IGLV8-61A0A075B6I0 122 aa6.79□□□□□ -1.32
SEC31A-228ENST00000509142 A0A087WTM6 91 aa6.79□□□□□ -1.32
SEC31A-228ENST00000509142 DYNC2H1Q8NCM8 4307 aaKnown RBP6.79□□□□□ -1.32
SEC31A-228ENST00000509142 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.78□□□□□ -1.32
SEC31A-228ENST00000509142 LINC00336Q6ZUF6 198 aa6.78□□□□□ -1.32
SEC31A-228ENST00000509142 SMIM26A0A096LP01 95 aa6.76□□□□□ -1.33
SEC31A-228ENST00000509142 HCG22E2RYF7 251 aa6.76□□□□□ -1.33
SEC31A-228ENST00000509142 SPRR1BP22528 89 aa6.76□□□□□ -1.33
SEC31A-228ENST00000509142 RTL8CO15255 209 aa6.76□□□□□ -1.33
SEC31A-228ENST00000509142 SPACA4Q8TDM5 124 aa6.76□□□□□ -1.33
SEC31A-228ENST00000509142 ZCCHC13Q8WW36 166 aaKnown RBP6.76□□□□□ -1.33
SEC31A-228ENST00000509142 WFDC13Q8IUB5 93 aa6.76□□□□□ -1.33
SEC31A-228ENST00000509142 IGLV9-49A0A0B4J1Y8 123 aa6.75□□□□□ -1.33
SEC31A-228ENST00000509142 RPL37AP61513 92 aaKnown RBP6.74□□□□□ -1.33
SEC31A-228ENST00000509142 ATP5EP56381 51 aaPredicted RBP6.73□□□□□ -1.33
SEC31A-228ENST00000509142 C1orf134Q5TEV5 83 aa6.72□□□□□ -1.33
SEC31A-228ENST00000509142 IGLV5-52A0A0A0MRZ9 124 aa6.72□□□□□ -1.33
SEC31A-228ENST00000509142 LY6G6CO95867 125 aa6.72□□□□□ -1.33
SEC31A-228ENST00000509142 FRAS1Q86XX4 4008 aa6.7□□□□□ -1.34
SEC31A-228ENST00000509142 KRTAP13-1Q8IUC0 172 aa6.7□□□□□ -1.34
SEC31A-228ENST00000509142 MPLKIPQ8TAP9 179 aa6.7□□□□□ -1.34
SEC31A-228ENST00000509142 STARD9Q9P2P6 4700 aa6.7□□□□□ -1.34
SEC31A-228ENST00000509142 Q6ZR54 194 aa6.69□□□□□ -1.34
SEC31A-228ENST00000509142 PSORS1C2Q9UIG4 136 aa6.69□□□□□ -1.34
SEC31A-228ENST00000509142 ZNF706Q9Y5V0 76 aaPredicted RBP6.69□□□□□ -1.34
SEC31A-228ENST00000509142 KRTAP29-1A8MX34 341 aaPredicted RBP6.68□□□□□ -1.34
SEC31A-228ENST00000509142 NDUFB1O75438 58 aa6.68□□□□□ -1.34
SEC31A-228ENST00000509142 CASC2Q6XLA1 102 aa6.68□□□□□ -1.34
SEC31A-228ENST00000509142 hDV103S1A0JD37 113 aa6.67□□□□□ -1.34
SEC31A-228ENST00000509142 PRR15Q8IV56 129 aa6.67□□□□□ -1.34
SEC31A-228ENST00000509142 DNAH8Q96JB1 4490 aa6.67□□□□□ -1.34
SEC31A-228ENST00000509142 A8MWP4 228 aa6.67□□□□□ -1.34
SEC31A-228ENST00000509142 MP68P56378 58 aa6.67□□□□□ -1.34
SEC31A-228ENST00000509142 C1orf64Q8NEQ6 169 aa6.67□□□□□ -1.34
SEC31A-228ENST00000509142 PRKDCP78527 4128 aaKnown RBP6.66□□□□□ -1.34
SEC31A-228ENST00000509142 TGP01266 2768 aa6.66□□□□□ -1.34
SEC31A-228ENST00000509142 PRR4Q16378 134 aa6.66□□□□□ -1.34
SEC31A-228ENST00000509142 LINC00472Q9H8W2 130 aa6.66□□□□□ -1.34
SEC31A-228ENST00000509142 DNAH2Q9P225 4427 aa6.66□□□□□ -1.34
SEC31A-228ENST00000509142 PLAC8Q9NZF1 115 aa6.65□□□□□ -1.34
SEC31A-228ENST00000509142 VPS13DQ5THJ4 4388 aa6.65□□□□□ -1.34
SEC31A-228ENST00000509142 HECTD4Q9Y4D8 3996 aa6.65□□□□□ -1.34
SEC31A-228ENST00000509142 ZNF861PO60384 105 aa6.65□□□□□ -1.35
SEC31A-228ENST00000509142 MOBPQ13875 183 aa6.65□□□□□ -1.35
SEC31A-228ENST00000509142 ANAPC11Q9NYG5 84 aa6.64□□□□□ -1.35
SEC31A-228ENST00000509142 KMT2AQ03164 3969 aa6.64□□□□□ -1.35
SEC31A-228ENST00000509142 PRO0628Q9UI54 55 aa6.63□□□□□ -1.35
SEC31A-228ENST00000509142 CDK2AP2O75956 126 aa6.62□□□□□ -1.35
SEC31A-228ENST00000509142 FBN3Q75N90 2809 aa6.62□□□□□ -1.35
SEC31A-228ENST00000509142 LINC00208Q96KT6 92 aa6.62□□□□□ -1.35
SEC31A-228ENST00000509142 MEGF8Q7Z7M0 2845 aa6.62□□□□□ -1.35
SEC31A-228ENST00000509142 LINC00483Q53H64 154 aa6.61□□□□□ -1.35
SEC31A-228ENST00000509142 DNAH17Q9UFH2 4485 aa6.61□□□□□ -1.35
SEC31A-228ENST00000509142 WWC2-AS2Q96NR7 200 aa6.6□□□□□ -1.35
SEC31A-228ENST00000509142 H0Y9P7 68 aa6.59□□□□□ -1.35
SEC31A-228ENST00000509142 TRAV22A0A0B4J277 110 aa6.59□□□□□ -1.35
SEC31A-228ENST00000509142 CYP4F30PQ9H0H9 118 aa6.59□□□□□ -1.35
SEC31A-228ENST00000509142 IGLV7-43P04211 117 aa6.58□□□□□ -1.36
SEC31A-228ENST00000509142 BRK1Q8WUW1 75 aa6.58□□□□□ -1.36
SEC31A-228ENST00000509142 Q96NJ1 140 aa6.57□□□□□ -1.36
SEC31A-228ENST00000509142 IGHV6-1A0A0B4J1U7 121 aa6.57□□□□□ -1.36
SEC31A-228ENST00000509142 NDUFS5O43920 106 aa6.56□□□□□ -1.36
SEC31A-228ENST00000509142 DNHD1Q96M86 4753 aa6.56□□□□□ -1.36
SEC31A-228ENST00000509142 MMP24-AS1A0A0U1RRL7 71 aa6.56□□□□□ -1.36
SEC31A-228ENST00000509142 CIRBP-AS1Q8TBR5 109 aa6.56□□□□□ -1.36
SEC31A-228ENST00000509142 SPINK6Q6UWN8 80 aa6.55□□□□□ -1.36
SEC31A-228ENST00000509142 Q1T7F1 81 aa6.54□□□□□ -1.36
SEC31A-228ENST00000509142 KRTAP10-2P60368 255 aa6.54□□□□□ -1.36
SEC31A-228ENST00000509142 H3BPC8 53 aa6.53□□□□□ -1.36
SEC31A-228ENST00000509142 C8orf17Q9NRJ1 99 aa6.53□□□□□ -1.36
SEC31A-228ENST00000509142 A0A1B0GVX0 72 aa6.52□□□□□ -1.37
SEC31A-228ENST00000509142 DNAH6Q9C0G6 4158 aa6.52□□□□□ -1.37
SEC31A-228ENST00000509142 PSPHP1O15172 72 aa6.51□□□□□ -1.37
SEC31A-228ENST00000509142 ALMS1Q8TCU4 4167 aa6.51□□□□□ -1.37
SEC31A-228ENST00000509142 ASB16-AS1Q495Z4 193 aa6.5□□□□□ -1.37
SEC31A-228ENST00000509142 TP53AIP1Q9HCN2 124 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms