RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 ASB16-AS1Q495Z4 193 aa8.2□□□□□ -1.1
UBE2D3-228ENST00000508974 SMIM29Q86T20 159 aa8.2□□□□□ -1.1
UBE2D3-228ENST00000508974 PRO1933Q9H354 126 aa8.2□□□□□ -1.1
UBE2D3-228ENST00000508974 A4D1N5 150 aa8.19□□□□□ -1.1
UBE2D3-228ENST00000508974 SCGB1D1O95968 90 aa8.19□□□□□ -1.1
UBE2D3-228ENST00000508974 IGLV5-48A0A075B6I7 105 aa8.18□□□□□ -1.1
UBE2D3-228ENST00000508974 SEC61BP60468 96 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-228ENST00000508974 C9orf92A6NGG3 77 aa8.17□□□□□ -1.1
UBE2D3-228ENST00000508974 C12orf57Q99622 126 aa8.17□□□□□ -1.1
UBE2D3-228ENST00000508974 KRTAP4-1Q9BYQ7 146 aa8.17□□□□□ -1.1
UBE2D3-228ENST00000508974 NHP2Q9NX24 153 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-228ENST00000508974 CD164Q04900 197 aa8.14□□□□□ -1.11
UBE2D3-228ENST00000508974 VAMP3Q15836 100 aa8.14□□□□□ -1.11
UBE2D3-228ENST00000508974 HIST1H4GQ99525 98 aa8.14□□□□□ -1.11
UBE2D3-228ENST00000508974 LINC00575Q6W349 94 aa8.12□□□□□ -1.11
UBE2D3-228ENST00000508974 Q6ZQY7 126 aa8.11□□□□□ -1.11
UBE2D3-228ENST00000508974 hADV29S1A0JD25 119 aa8.1□□□□□ -1.11
UBE2D3-228ENST00000508974 F8WEM9 126 aa8.1□□□□□ -1.11
UBE2D3-228ENST00000508974 COX8AP10176 69 aa8.1□□□□□ -1.11
UBE2D3-228ENST00000508974 C14orf144Q96I85 54 aa8.09□□□□□ -1.11
UBE2D3-228ENST00000508974 C1orf195Q5TG92 126 aa8.08□□□□□ -1.12
UBE2D3-228ENST00000508974 PAM16Q9Y3D7 125 aa8.07□□□□□ -1.12
UBE2D3-228ENST00000508974 LCE4AQ5TA78 99 aa8.06□□□□□ -1.12
UBE2D3-228ENST00000508974 SPATA45Q537H7 98 aa8.05□□□□□ -1.12
UBE2D3-228ENST00000508974 PCOTHQ58A44 107 aa8.05□□□□□ -1.12
UBE2D3-228ENST00000508974 LCE1DQ5T752 114 aa8.05□□□□□ -1.12
UBE2D3-228ENST00000508974 Q5XG85 94 aa8.05□□□□□ -1.12
UBE2D3-228ENST00000508974 BVES-AS1Q5T3Y7 98 aa8.04□□□□□ -1.12
UBE2D3-228ENST00000508974 DLEU1O43261 78 aa8.03□□□□□ -1.12
UBE2D3-228ENST00000508974 RAB37Q96AX2 223 aa8.03□□□□□ -1.12
UBE2D3-228ENST00000508974 IGLV8-61A0A075B6I0 122 aa8.02□□□□□ -1.13
UBE2D3-228ENST00000508974 TCL1BO95988 128 aa8.02□□□□□ -1.13
UBE2D3-228ENST00000508974 CFC1BP0CG36 223 aa8.02□□□□□ -1.13
UBE2D3-228ENST00000508974 CFC1P0CG37 223 aa8.02□□□□□ -1.13
UBE2D3-228ENST00000508974 IGFL1Q6UW32 110 aa8.02□□□□□ -1.13
UBE2D3-228ENST00000508974 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.02□□□□□ -1.13
UBE2D3-228ENST00000508974 VAMP8Q9BV40 100 aa8.02□□□□□ -1.13
UBE2D3-228ENST00000508974 CLEC2BQ92478 149 aa8.01□□□□□ -1.13
UBE2D3-228ENST00000508974 KRTAP19-4Q3LI73 84 aa8□□□□□ -1.13
UBE2D3-228ENST00000508974 OCIAD2Q56VL3 154 aa8□□□□□ -1.13
UBE2D3-228ENST00000508974 Q6JHZ5 121 aa8□□□□□ -1.13
UBE2D3-228ENST00000508974 C2orf91Q6ZV80 131 aa8□□□□□ -1.13
UBE2D3-228ENST00000508974 SNHG12Q9BXW3 62 aa8□□□□□ -1.13
UBE2D3-228ENST00000508974 H3BUT2 72 aa7.99□□□□□ -1.13
UBE2D3-228ENST00000508974 HIGD1BQ9P298 99 aa7.98□□□□□ -1.13
UBE2D3-228ENST00000508974 TRBV7-7A0A0K0K1E9 115 aa7.97□□□□□ -1.13
UBE2D3-228ENST00000508974 A0A0B4J2C4 111 aa7.96□□□□□ -1.14
UBE2D3-228ENST00000508974 FAM218AQ96MZ4 157 aa7.96□□□□□ -1.14
UBE2D3-228ENST00000508974 CEND1Q8N111 149 aa7.95□□□□□ -1.14
UBE2D3-228ENST00000508974 PPDPFLQ8WWR9 84 aa7.95□□□□□ -1.14
UBE2D3-228ENST00000508974 RPL37P61927 97 aaKnown RBP7.94□□□□□ -1.14
UBE2D3-228ENST00000508974 KRTAP4-7Q9BYR0 210 aa7.94□□□□□ -1.14
UBE2D3-228ENST00000508974 H0YGX0 51 aa7.92□□□□□ -1.14
UBE2D3-228ENST00000508974 SNCGO76070 127 aa7.92□□□□□ -1.14
UBE2D3-228ENST00000508974 FXYD2P54710 66 aa7.92□□□□□ -1.14
UBE2D3-228ENST00000508974 PRO1854Q9UHT4 67 aa7.91□□□□□ -1.14
UBE2D3-228ENST00000508974 KRTAP9-7A8MTY7 169 aa7.9□□□□□ -1.14
UBE2D3-228ENST00000508974 KRTAP19-2Q3LHN2 52 aa7.9□□□□□ -1.14
UBE2D3-228ENST00000508974 NDUFV3P56181 108 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-228ENST00000508974 LST1O00453 97 aa7.88□□□□□ -1.15
UBE2D3-228ENST00000508974 FABP2P12104 132 aa7.88□□□□□ -1.15
UBE2D3-228ENST00000508974 OBSCN-AS1Q96MR7 158 aa7.88□□□□□ -1.15
UBE2D3-228ENST00000508974 TRIAP1O43715 76 aa7.87□□□□□ -1.15
UBE2D3-228ENST00000508974 PYY3Q5JQD4 70 aa7.87□□□□□ -1.15
UBE2D3-228ENST00000508974 TMA7Q9Y2S6 64 aaKnown RBP7.87□□□□□ -1.15
UBE2D3-228ENST00000508974 K7ERJ3 54 aa7.86□□□□□ -1.15
UBE2D3-228ENST00000508974 H3BMG7 143 aa7.85□□□□□ -1.15
UBE2D3-228ENST00000508974 A0A1B0GV72 72 aa7.84□□□□□ -1.15
UBE2D3-228ENST00000508974 MT1HP80294 61 aa7.84□□□□□ -1.15
UBE2D3-228ENST00000508974 SS18L2Q9UHA2 77 aa7.84□□□□□ -1.15
UBE2D3-228ENST00000508974 A0A087WSZ3 146 aa7.83□□□□□ -1.16
UBE2D3-228ENST00000508974 PSMB2P49721 201 aa7.83□□□□□ -1.16
UBE2D3-228ENST00000508974 HSD52Q0P140 79 aa7.83□□□□□ -1.16
UBE2D3-228ENST00000508974 TEN1Q86WV5 123 aa7.83□□□□□ -1.16
UBE2D3-228ENST00000508974 A0A1B0GX51 115 aa7.82□□□□□ -1.16
UBE2D3-228ENST00000508974 Q6Q795 121 aa7.82□□□□□ -1.16
UBE2D3-228ENST00000508974 Q96NJ1 140 aa7.81□□□□□ -1.16
UBE2D3-228ENST00000508974 DNAL4O96015 105 aa7.8□□□□□ -1.16
UBE2D3-228ENST00000508974 COX6B2Q6YFQ2 88 aa7.8□□□□□ -1.16
UBE2D3-228ENST00000508974 KRTAP4-9Q9BYQ8 210 aa7.8□□□□□ -1.16
UBE2D3-228ENST00000508974 ATP11AUNQ6ZP68 121 aa7.79□□□□□ -1.16
UBE2D3-228ENST00000508974 ORMDL1Q9P0S3 153 aa7.78□□□□□ -1.16
UBE2D3-228ENST00000508974 A0A1W2PNM2 257 aa7.77□□□□□ -1.17
UBE2D3-228ENST00000508974 Q75L30 129 aa7.77□□□□□ -1.17
UBE2D3-228ENST00000508974 UQCR10Q9UDW1 63 aa7.76□□□□□ -1.17
UBE2D3-228ENST00000508974 M0R2T5 61 aa7.75□□□□□ -1.17
UBE2D3-228ENST00000508974 COX6CP09669 75 aa7.75□□□□□ -1.17
UBE2D3-228ENST00000508974 SIGMAR1Q99720 223 aa7.75□□□□□ -1.17
UBE2D3-228ENST00000508974 DSCR10P59022 87 aa7.74□□□□□ -1.17
UBE2D3-228ENST00000508974 ANKRD29Q8N6D5 301 aa7.74□□□□□ -1.17
UBE2D3-228ENST00000508974 TMEM256-PLSCR3K7ERE1 68 aa7.7□□□□□ -1.18
UBE2D3-228ENST00000508974 TRBV7-4A0A0J9YYF1 115 aa7.69□□□□□ -1.18
UBE2D3-228ENST00000508974 IGKV4-1P06312 121 aa7.69□□□□□ -1.18
UBE2D3-228ENST00000508974 SCGB1C2P0DMR2 95 aa7.69□□□□□ -1.18
UBE2D3-228ENST00000508974 KRTAP10-6P60371 365 aaPredicted RBP7.69□□□□□ -1.18
UBE2D3-228ENST00000508974 DEFB116Q30KQ4 102 aa7.69□□□□□ -1.18
UBE2D3-228ENST00000508974 C20orf166-AS1Q96NR2 134 aa7.69□□□□□ -1.18
UBE2D3-228ENST00000508974 FLGP20930 4061 aaPredicted RBP7.68□□□□□ -1.18
UBE2D3-228ENST00000508974 A8MUU9 505 aa7.68□□□□□ -1.18
UBE2D3-228ENST00000508974 H3BQ85 93 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms