RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 A0A087WXM4 84 aa1.12□□□□□ -2.23
TOPBP1-206ENST00000508524 A6NED7 52 aa1.12□□□□□ -2.23
TOPBP1-206ENST00000508524 SPINK8P0C7L1 97 aa1.12□□□□□ -2.23
TOPBP1-206ENST00000508524 SERF2P84101 59 aa1.12□□□□□ -2.23
TOPBP1-206ENST00000508524 SMAGPQ0VAQ4 97 aa1.12□□□□□ -2.23
TOPBP1-206ENST00000508524 C10orf91Q5T1B1 145 aa1.12□□□□□ -2.23
TOPBP1-206ENST00000508524 RPL7L1Q6DKI1 246 aaKnown RBP1.12□□□□□ -2.23
TOPBP1-206ENST00000508524 Q6ZRX8 168 aa1.12□□□□□ -2.23
TOPBP1-206ENST00000508524 COX7B2Q8TF08 81 aa1.12□□□□□ -2.23
TOPBP1-206ENST00000508524 ZNF625Q96I27 306 aaPredicted RBP1.12□□□□□ -2.23
TOPBP1-206ENST00000508524 TMEM141Q96I45 108 aa1.12□□□□□ -2.23
TOPBP1-206ENST00000508524 Q96NJ1 140 aa1.12□□□□□ -2.23
TOPBP1-206ENST00000508524 AMELXQ99217 191 aa1.12□□□□□ -2.23
TOPBP1-206ENST00000508524 TCEAL7Q9BRU2 100 aa1.12□□□□□ -2.23
TOPBP1-206ENST00000508524 TMEM191AQ9H0A3 160 aa1.12□□□□□ -2.23
TOPBP1-206ENST00000508524 TINCRA0A1B0GVN0 87 aa1.11□□□□□ -2.23
TOPBP1-206ENST00000508524 NAP1L6A6NFF2 107 aa1.11□□□□□ -2.23
TOPBP1-206ENST00000508524 D6R8Y8 96 aa1.11□□□□□ -2.23
TOPBP1-206ENST00000508524 NPYP01303 97 aa1.11□□□□□ -2.23
TOPBP1-206ENST00000508524 IL7P13232 177 aa1.11□□□□□ -2.23
TOPBP1-206ENST00000508524 SPRR1BP22528 89 aa1.11□□□□□ -2.23
TOPBP1-206ENST00000508524 CCL20P78556 96 aa1.11□□□□□ -2.23
TOPBP1-206ENST00000508524 MRPL51Q4U2R6 128 aaKnown RBP1.11□□□□□ -2.23
TOPBP1-206ENST00000508524 Q5BKY6 102 aa1.11□□□□□ -2.23
TOPBP1-206ENST00000508524 ALKAL2Q6UX46 152 aa1.11□□□□□ -2.23
TOPBP1-206ENST00000508524 SMIM2Q9BVW6 85 aa1.11□□□□□ -2.23
TOPBP1-206ENST00000508524 LINC00313P59037 77 aa1.1□□□□□ -2.23
TOPBP1-206ENST00000508524 TRIQKQ629K1 86 aa1.1□□□□□ -2.23
TOPBP1-206ENST00000508524 SMIM15Q7Z3B0 74 aa1.1□□□□□ -2.23
TOPBP1-206ENST00000508524 VCX3BQ9H321 246 aa1.1□□□□□ -2.23
TOPBP1-206ENST00000508524 ERG28Q9UKR5 140 aa1.1□□□□□ -2.23
TOPBP1-206ENST00000508524 TRBV24-1A0A075B6N3 115 aa1.09□□□□□ -2.23
TOPBP1-206ENST00000508524 TRAV9-1A0A075B6T8 112 aa1.09□□□□□ -2.23
TOPBP1-206ENST00000508524 IGIPA6NJ69 53 aa1.09□□□□□ -2.23
TOPBP1-206ENST00000508524 LYRM1O43325 122 aa1.09□□□□□ -2.23
TOPBP1-206ENST00000508524 IFI27P40305 119 aaPredicted RBP1.09□□□□□ -2.23
TOPBP1-206ENST00000508524 GNG4P50150 75 aa1.09□□□□□ -2.23
TOPBP1-206ENST00000508524 IMUPQ9GZP8 106 aa1.09□□□□□ -2.23
TOPBP1-206ENST00000508524 A0A1B0GUT8 65 aa1.08□□□□□ -2.24
TOPBP1-206ENST00000508524 HIGD1CA8MV81 97 aa1.08□□□□□ -2.24
TOPBP1-206ENST00000508524 HERVK_113P63121 156 aa1.08□□□□□ -2.24
TOPBP1-206ENST00000508524 RBM3P98179 157 aaKnown RBP1.08□□□□□ -2.24
TOPBP1-206ENST00000508524 AKR1C8PQ5T2L2 129 aa1.08□□□□□ -2.24
TOPBP1-206ENST00000508524 ATP5L2Q7Z4Y8 100 aa1.08□□□□□ -2.24
TOPBP1-206ENST00000508524 KCNRGQ8N5I3 272 aa1.08□□□□□ -2.24
TOPBP1-206ENST00000508524 SFT2D1Q8WV19 159 aa1.08□□□□□ -2.24
TOPBP1-206ENST00000508524 MBD3L1Q8WWY6 194 aa1.08□□□□□ -2.24
TOPBP1-206ENST00000508524 SMIM12Q96EX1 92 aa1.08□□□□□ -2.24
TOPBP1-206ENST00000508524 C20orf78Q9BR46 151 aa1.08□□□□□ -2.24
TOPBP1-206ENST00000508524 C2orf88Q9BSF0 95 aa1.08□□□□□ -2.24
TOPBP1-206ENST00000508524 PRO1933Q9H354 126 aa1.08□□□□□ -2.24
TOPBP1-206ENST00000508524 Q9H521 79 aa1.08□□□□□ -2.24
TOPBP1-206ENST00000508524 BATF3Q9NR55 127 aa1.08□□□□□ -2.24
TOPBP1-206ENST00000508524 PFDN1O60925 122 aa1.07□□□□□ -2.24
TOPBP1-206ENST00000508524 ADCYAP1P18509 176 aa1.07□□□□□ -2.24
TOPBP1-206ENST00000508524 KRTAP20-2Q3LI61 65 aa1.07□□□□□ -2.24
TOPBP1-206ENST00000508524 FAM213BQ8TBF2 198 aa1.07□□□□□ -2.24
TOPBP1-206ENST00000508524 GNG13Q9P2W3 67 aa1.07□□□□□ -2.24
TOPBP1-206ENST00000508524 LINC00614P0C842 121 aa1.06□□□□□ -2.24
TOPBP1-206ENST00000508524 DDTP30046 118 aa1.06□□□□□ -2.24
TOPBP1-206ENST00000508524 AKR1D1P51857 326 aa1.06□□□□□ -2.24
TOPBP1-206ENST00000508524 SCGB1D4Q6XE38 83 aa1.06□□□□□ -2.24
TOPBP1-206ENST00000508524 WFDC13Q8IUB5 93 aa1.06□□□□□ -2.24
TOPBP1-206ENST00000508524 DEFB105AQ8NG35 78 aa1.06□□□□□ -2.24
TOPBP1-206ENST00000508524 LAMTOR3Q9UHA4 124 aa1.06□□□□□ -2.24
TOPBP1-206ENST00000508524 TCL1BO95988 128 aa1.05□□□□□ -2.24
TOPBP1-206ENST00000508524 PPP1R17O96001 155 aa1.05□□□□□ -2.24
TOPBP1-206ENST00000508524 SMIM13P0DJ93 91 aa1.05□□□□□ -2.24
TOPBP1-206ENST00000508524 CKS2P33552 79 aa1.05□□□□□ -2.24
TOPBP1-206ENST00000508524 SPINK7P58062 85 aa1.05□□□□□ -2.24
TOPBP1-206ENST00000508524 LINC00158P58513 81 aa1.05□□□□□ -2.24
TOPBP1-206ENST00000508524 COX17Q14061 63 aa1.05□□□□□ -2.24
TOPBP1-206ENST00000508524 MAP1LC3AQ9H492 121 aa1.05□□□□□ -2.24
TOPBP1-206ENST00000508524 CYSLTR1Q9Y271 337 aa1.05□□□□□ -2.24
TOPBP1-206ENST00000508524 SYNE1Q8NF91 8797 aaKnown RBP1.05□□□□□ -2.24
TOPBP1-206ENST00000508524 FAM236AA0A1B0GUQ0 79 aa1.04□□□□□ -2.24
TOPBP1-206ENST00000508524 FAM236BA0A1B0GV22 79 aa1.04□□□□□ -2.24
TOPBP1-206ENST00000508524 LINC00862A6NCI5 91 aa1.04□□□□□ -2.24
TOPBP1-206ENST00000508524 S100A5P33763 92 aa1.04□□□□□ -2.24
TOPBP1-206ENST00000508524 NDUFA6P56556 154 aa1.04□□□□□ -2.24
TOPBP1-206ENST00000508524 COMMD7Q86VX2 200 aa1.04□□□□□ -2.24
TOPBP1-206ENST00000508524 CST9LQ9H4G1 147 aa1.04□□□□□ -2.24
TOPBP1-206ENST00000508524 V9GYV3 84 aa1.04□□□□□ -2.24
TOPBP1-206ENST00000508524 TRAV23DV6A0A075B6W5 121 aa1.03□□□□□ -2.24
TOPBP1-206ENST00000508524 BORCS7-ASMTA0A0B4J1R7 106 aa1.03□□□□□ -2.24
TOPBP1-206ENST00000508524 TRBV7-7A0A0K0K1E9 115 aa1.03□□□□□ -2.24
TOPBP1-206ENST00000508524 SSNA1O43805 119 aa1.03□□□□□ -2.24
TOPBP1-206ENST00000508524 SEC11AP67812 179 aa1.03□□□□□ -2.24
TOPBP1-206ENST00000508524 ZNF345Q14585 488 aa1.03□□□□□ -2.24
TOPBP1-206ENST00000508524 JOSD1Q15040 202 aaPredicted RBP1.03□□□□□ -2.24
TOPBP1-206ENST00000508524 KRTAP19-3Q7Z4W3 81 aa1.03□□□□□ -2.24
TOPBP1-206ENST00000508524 PRELID3AQ96N28 172 aa1.03□□□□□ -2.24
TOPBP1-206ENST00000508524 MANBALQ9NQG1 85 aa1.03□□□□□ -2.24
TOPBP1-206ENST00000508524 IGLV5-48A0A075B6I7 105 aa1.02□□□□□ -2.25
TOPBP1-206ENST00000508524 HMSDA8MTL9 139 aa1.02□□□□□ -2.25
TOPBP1-206ENST00000508524 PDE6DO43924 150 aa1.02□□□□□ -2.25
TOPBP1-206ENST00000508524 TSPEAR-AS2P59090 65 aa1.02□□□□□ -2.25
TOPBP1-206ENST00000508524 KRTAP19-7Q3SYF9 63 aa1.02□□□□□ -2.25
TOPBP1-206ENST00000508524 H1FX-AS1Q4G0G2 97 aa1.02□□□□□ -2.25
TOPBP1-206ENST00000508524 MRPL54Q6P161 138 aaKnown RBP1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms