RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 PRAC1Q96KF2 57 aa1.96□□□□□ -2.1
NEDD4-208ENST00000508342 A8MTW9 85 aa1.95□□□□□ -2.1
NEDD4-208ENST00000508342 PSORS1C2Q9UIG4 136 aa1.95□□□□□ -2.1
NEDD4-208ENST00000508342 ZNF861PO60384 105 aa1.95□□□□□ -2.1
NEDD4-208ENST00000508342 C8orf87E5RJ46 101 aa1.95□□□□□ -2.1
NEDD4-208ENST00000508342 TRAV7A0A075B6U4 112 aa1.95□□□□□ -2.1
NEDD4-208ENST00000508342 CELSR3Q9NYQ7 3312 aa1.95□□□□□ -2.1
NEDD4-208ENST00000508342 CFAP54Q96N23 3096 aa1.95□□□□□ -2.1
NEDD4-208ENST00000508342 LAMA1P25391 3075 aa1.94□□□□□ -2.1
NEDD4-208ENST00000508342 C6orf48Q9UBA6 75 aa1.94□□□□□ -2.1
NEDD4-208ENST00000508342 H3BPC8 53 aa1.94□□□□□ -2.1
NEDD4-208ENST00000508342 IGIPA6NJ69 53 aa1.94□□□□□ -2.1
NEDD4-208ENST00000508342 C9orf163Q8N9P6 203 aa1.94□□□□□ -2.1
NEDD4-208ENST00000508342 ST20-AS1Q8NBB2 130 aa1.94□□□□□ -2.1
NEDD4-208ENST00000508342 OBSCN-AS1Q96MR7 158 aa1.94□□□□□ -2.1
NEDD4-208ENST00000508342 LAMA5O15230 3695 aa1.94□□□□□ -2.1
NEDD4-208ENST00000508342 IGLV8-61A0A075B6I0 122 aa1.94□□□□□ -2.1
NEDD4-208ENST00000508342 LOC101927531A0A1B0GV80 90 aa1.94□□□□□ -2.1
NEDD4-208ENST00000508342 DMXL1Q9Y485 3027 aa1.93□□□□□ -2.1
NEDD4-208ENST00000508342 CNFNQ9BYD5 112 aa1.93□□□□□ -2.1
NEDD4-208ENST00000508342 GVQW2A0A096LPI5 108 aaPredicted RBP1.93□□□□□ -2.1
NEDD4-208ENST00000508342 TRAV22A0A0B4J277 110 aa1.93□□□□□ -2.1
NEDD4-208ENST00000508342 FAM168BA1KXE4 195 aa1.93□□□□□ -2.1
NEDD4-208ENST00000508342 C2orf91Q6ZV80 131 aa1.93□□□□□ -2.1
NEDD4-208ENST00000508342 LINC01546A6NGU7 62 aa1.93□□□□□ -2.1
NEDD4-208ENST00000508342 IGLV6-57P01721 117 aa1.93□□□□□ -2.1
NEDD4-208ENST00000508342 MAP1AP78559 2803 aaPredicted RBP1.93□□□□□ -2.1
NEDD4-208ENST00000508342 BIRC6Q9NR09 4857 aa1.93□□□□□ -2.1
NEDD4-208ENST00000508342 KRTAP10-2P60368 255 aa1.93□□□□□ -2.1
NEDD4-208ENST00000508342 GIG44P09565 113 aaPredicted RBP1.93□□□□□ -2.1
NEDD4-208ENST00000508342 SOSTDC1Q6X4U4 206 aa1.93□□□□□ -2.1
NEDD4-208ENST00000508342 Q8N1X5 172 aa1.93□□□□□ -2.1
NEDD4-208ENST00000508342 Q6ZRX8 168 aa1.93□□□□□ -2.1
NEDD4-208ENST00000508342 CRIPTQ9P021 101 aa1.92□□□□□ -2.1
NEDD4-208ENST00000508342 CUBNO60494 3623 aa1.92□□□□□ -2.1
NEDD4-208ENST00000508342 RYR3Q15413 4870 aa1.92□□□□□ -2.1
NEDD4-208ENST00000508342 IGLV7-43P04211 117 aa1.92□□□□□ -2.1
NEDD4-208ENST00000508342 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.92□□□□□ -2.1
NEDD4-208ENST00000508342 KRTAP10-1P60331 282 aa1.92□□□□□ -2.1
NEDD4-208ENST00000508342 A0A0C4DFX4 3053 aa1.92□□□□□ -2.1
NEDD4-208ENST00000508342 DNAH3Q8TD57 4116 aa1.92□□□□□ -2.1
NEDD4-208ENST00000508342 ITPR2Q14571 2701 aa1.91□□□□□ -2.1
NEDD4-208ENST00000508342 KLK9Q2XQG4 91 aa1.91□□□□□ -2.1
NEDD4-208ENST00000508342 TRRAPQ9Y4A5 3859 aa1.91□□□□□ -2.1
NEDD4-208ENST00000508342 C15orf56Q8N910 161 aa1.91□□□□□ -2.1
NEDD4-208ENST00000508342 A6NN06 94 aa1.91□□□□□ -2.1
NEDD4-208ENST00000508342 GAS8-AS1O95177 125 aa1.91□□□□□ -2.1
NEDD4-208ENST00000508342 C9orf129Q5T035 196 aaKnown RBP1.91□□□□□ -2.1
NEDD4-208ENST00000508342 NSD1Q96L73 2696 aaPredicted RBP1.91□□□□□ -2.1
NEDD4-208ENST00000508342 SPINT4Q6UDR6 99 aa1.91□□□□□ -2.1
NEDD4-208ENST00000508342 DCHS1Q96JQ0 3298 aa1.91□□□□□ -2.1
NEDD4-208ENST00000508342 FRYQ5TBA9 3013 aa1.9□□□□□ -2.1
NEDD4-208ENST00000508342 MRPL34Q9BQ48 92 aaKnown RBP1.9□□□□□ -2.1
NEDD4-208ENST00000508342 IGLV5-48A0A075B6I7 105 aa1.9□□□□□ -2.11
NEDD4-208ENST00000508342 UBR5O95071 2799 aaPredicted RBP1.9□□□□□ -2.11
NEDD4-208ENST00000508342 DSCR10P59022 87 aa1.9□□□□□ -2.11
NEDD4-208ENST00000508342 TMEM254Q8TBM7 123 aa1.9□□□□□ -2.11
NEDD4-208ENST00000508342 KMT2CQ8NEZ4 4911 aaKnown RBP1.9□□□□□ -2.11
NEDD4-208ENST00000508342 KRTAP4-16G5E9R7 235 aaPredicted RBP1.9□□□□□ -2.11
NEDD4-208ENST00000508342 FAM218AQ96MZ4 157 aa1.9□□□□□ -2.11
NEDD4-208ENST00000508342 KRTAP16-1A8MUX0 517 aa1.89□□□□□ -2.11
NEDD4-208ENST00000508342 SPANXA2-OT1Q8N9U9 137 aa1.89□□□□□ -2.11
NEDD4-208ENST00000508342 ABCA13Q86UQ4 5058 aa1.89□□□□□ -2.11
NEDD4-208ENST00000508342 A8MUN3 132 aa1.89□□□□□ -2.11
NEDD4-208ENST00000508342 H7BZZ5 65 aa1.89□□□□□ -2.11
NEDD4-208ENST00000508342 ADAMTSL4-AS1Q5T5F5 129 aa1.89□□□□□ -2.11
NEDD4-208ENST00000508342 CDC42SE1Q9NRR8 79 aa1.89□□□□□ -2.11
NEDD4-208ENST00000508342 NDUFAF8A1L188 74 aa1.89□□□□□ -2.11
NEDD4-208ENST00000508342 K7EQZ3 153 aa1.89□□□□□ -2.11
NEDD4-208ENST00000508342 HRES1P13985 223 aa1.89□□□□□ -2.11
NEDD4-208ENST00000508342 TENM4Q6N022 2769 aa1.89□□□□□ -2.11
NEDD4-208ENST00000508342 CNBPP62633 177 aaKnown RBP1.89□□□□□ -2.11
NEDD4-208ENST00000508342 FP248Q71RG6 208 aaPredicted RBP1.89□□□□□ -2.11
NEDD4-208ENST00000508342 LINC00612Q8N6U2 182 aa1.89□□□□□ -2.11
NEDD4-208ENST00000508342 ANAPC11Q9NYG5 84 aa1.89□□□□□ -2.11
NEDD4-208ENST00000508342 MUC3AQ02505 3323 aa1.89□□□□□ -2.11
NEDD4-208ENST00000508342 SMIM29Q86T20 159 aa1.88□□□□□ -2.11
NEDD4-208ENST00000508342 PLAC4Q8WY50 150 aa1.88□□□□□ -2.11
NEDD4-208ENST00000508342 LINC00846Q9NV44 126 aa1.88□□□□□ -2.11
NEDD4-208ENST00000508342 A8MWP4 228 aa1.88□□□□□ -2.11
NEDD4-208ENST00000508342 DNAH6Q9C0G6 4158 aa1.88□□□□□ -2.11
NEDD4-208ENST00000508342 TRBV7-4A0A0J9YYF1 115 aa1.88□□□□□ -2.11
NEDD4-208ENST00000508342 KIAA1109Q2LD37 5005 aa1.88□□□□□ -2.11
NEDD4-208ENST00000508342 ZNF469Q96JG9 3925 aaPredicted RBP1.88□□□□□ -2.11
NEDD4-208ENST00000508342 LUZP6Q538Z0 58 aa1.88□□□□□ -2.11
NEDD4-208ENST00000508342 CRYBG3Q68DQ2 2970 aa1.88□□□□□ -2.11
NEDD4-208ENST00000508342 A0A1W2PNN7 141 aa1.87□□□□□ -2.11
NEDD4-208ENST00000508342 Q6ZQT0 140 aa1.87□□□□□ -2.11
NEDD4-208ENST00000508342 A0A087WVE0 104 aa1.87□□□□□ -2.11
NEDD4-208ENST00000508342 A0A0D9SG42 100 aa1.87□□□□□ -2.11
NEDD4-208ENST00000508342 HMCN2Q8NDA2 5059 aa1.87□□□□□ -2.11
NEDD4-208ENST00000508342 CSAG1Q6PB30 78 aa1.87□□□□□ -2.11
NEDD4-208ENST00000508342 HECTD4Q9Y4D8 3996 aa1.87□□□□□ -2.11
NEDD4-208ENST00000508342 LINC00483Q53H64 154 aa1.87□□□□□ -2.11
NEDD4-208ENST00000508342 TSPEAR-AS2P59090 65 aa1.86□□□□□ -2.11
NEDD4-208ENST00000508342 IGFL1Q6UW32 110 aa1.86□□□□□ -2.11
NEDD4-208ENST00000508342 TRIOO75962 3097 aa1.86□□□□□ -2.11
NEDD4-208ENST00000508342 A0A1B0GVX0 72 aa1.86□□□□□ -2.11
NEDD4-208ENST00000508342 UQCR11O14957 56 aa1.86□□□□□ -2.11
NEDD4-208ENST00000508342 PLAC8Q9NZF1 115 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms