RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 IFITM1P13164 125 aa8.19□□□□□ -1.1
SNF8-205ENST00000507302 KRTAP10-10P60014 251 aa8.19□□□□□ -1.1
SNF8-205ENST00000507302 LINC01545Q5VT33 79 aa8.19□□□□□ -1.1
SNF8-205ENST00000507302 MPLKIPQ8TAP9 179 aa8.19□□□□□ -1.1
SNF8-205ENST00000507302 A6NDN8 102 aa8.18□□□□□ -1.1
SNF8-205ENST00000507302 SMIM11BQ8TCY0 68 aa8.17□□□□□ -1.1
SNF8-205ENST00000507302 COPS9Q8WXC6 57 aa8.17□□□□□ -1.1
SNF8-205ENST00000507302 TRAV13-2A0A0B4J235 113 aa8.16□□□□□ -1.1
SNF8-205ENST00000507302 OCIAD2Q56VL3 154 aa8.16□□□□□ -1.1
SNF8-205ENST00000507302 KRTAP16-1A8MUX0 517 aa8.15□□□□□ -1.1
SNF8-205ENST00000507302 KRTAP6-3Q3LI67 103 aa8.15□□□□□ -1.1
SNF8-205ENST00000507302 LINC00575Q6W349 94 aa8.15□□□□□ -1.1
SNF8-205ENST00000507302 Q6ZVH6 145 aa8.15□□□□□ -1.1
SNF8-205ENST00000507302 LINC00846Q9NV44 126 aa8.15□□□□□ -1.1
SNF8-205ENST00000507302 LST1O00453 97 aa8.14□□□□□ -1.11
SNF8-205ENST00000507302 PET117Q6UWS5 81 aa8.12□□□□□ -1.11
SNF8-205ENST00000507302 Q6ZQY7 126 aa8.12□□□□□ -1.11
SNF8-205ENST00000507302 MUSTN1Q8IVN3 82 aa8.12□□□□□ -1.11
SNF8-205ENST00000507302 HRES1P13985 223 aa8.1□□□□□ -1.11
SNF8-205ENST00000507302 SCGB1D4Q6XE38 83 aa8.09□□□□□ -1.11
SNF8-205ENST00000507302 hADV29S1A0JD25 119 aa8.08□□□□□ -1.12
SNF8-205ENST00000507302 SLC7A5P1Q8MH63 180 aa8.08□□□□□ -1.12
SNF8-205ENST00000507302 PPDPFLQ8WWR9 84 aa8.08□□□□□ -1.12
SNF8-205ENST00000507302 FAM236DA0A1B0GTK5 79 aa8.06□□□□□ -1.12
SNF8-205ENST00000507302 FAM236CP0DP71 79 aa8.06□□□□□ -1.12
SNF8-205ENST00000507302 VAMP3Q15836 100 aa8.06□□□□□ -1.12
SNF8-205ENST00000507302 SS18L2Q9UHA2 77 aa8.06□□□□□ -1.12
SNF8-205ENST00000507302 COLCA2A8K830 154 aa8.05□□□□□ -1.12
SNF8-205ENST00000507302 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.04□□□□□ -1.12
SNF8-205ENST00000507302 SCGB1D1O95968 90 aa8.03□□□□□ -1.12
SNF8-205ENST00000507302 ANKRD39Q53RE8 183 aa8.03□□□□□ -1.12
SNF8-205ENST00000507302 RBM12B-AS1Q9P1G2 102 aa8.03□□□□□ -1.12
SNF8-205ENST00000507302 C3orf79P0CE67 100 aa8.02□□□□□ -1.13
SNF8-205ENST00000507302 NOTCH2NLQ7Z3S9 236 aa8.02□□□□□ -1.13
SNF8-205ENST00000507302 H3BUT2 72 aa8.01□□□□□ -1.13
SNF8-205ENST00000507302 DSCR10P59022 87 aa8□□□□□ -1.13
SNF8-205ENST00000507302 HIST1H2BKO60814 126 aa7.99□□□□□ -1.13
SNF8-205ENST00000507302 HIST1H2BJP06899 126 aa7.99□□□□□ -1.13
SNF8-205ENST00000507302 HIST1H2BOP23527 126 aa7.99□□□□□ -1.13
SNF8-205ENST00000507302 HIST1H2BBP33778 126 aa7.99□□□□□ -1.13
SNF8-205ENST00000507302 HIST1H2BDP58876 126 aa7.99□□□□□ -1.13
SNF8-205ENST00000507302 HIST1H2BCP62807 126 aa7.99□□□□□ -1.13
SNF8-205ENST00000507302 HIST2H2BEQ16778 126 aa7.99□□□□□ -1.13
SNF8-205ENST00000507302 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.99□□□□□ -1.13
SNF8-205ENST00000507302 TEN1Q86WV5 123 aa7.99□□□□□ -1.13
SNF8-205ENST00000507302 HIST1H2BHQ93079 126 aa7.99□□□□□ -1.13
SNF8-205ENST00000507302 HIST1H2BNQ99877 126 aa7.99□□□□□ -1.13
SNF8-205ENST00000507302 HIST1H2BMQ99879 126 aa7.99□□□□□ -1.13
SNF8-205ENST00000507302 SNHG12Q9BXW3 62 aa7.98□□□□□ -1.13
SNF8-205ENST00000507302 A0A087WSZ3 146 aa7.94□□□□□ -1.14
SNF8-205ENST00000507302 LINC00313P59037 77 aa7.93□□□□□ -1.14
SNF8-205ENST00000507302 BVES-AS1Q5T3Y7 98 aa7.91□□□□□ -1.14
SNF8-205ENST00000507302 NEBP20929 6669 aa7.91□□□□□ -1.14
SNF8-205ENST00000507302 KRTDAPP60985 99 aa7.9□□□□□ -1.14
SNF8-205ENST00000507302 COA6Q5JTJ3 125 aaKnown RBP7.89□□□□□ -1.15
SNF8-205ENST00000507302 ATOH7Q8N100 152 aa7.88□□□□□ -1.15
SNF8-205ENST00000507302 A8MWP4 228 aa7.87□□□□□ -1.15
SNF8-205ENST00000507302 NDUFV3P56181 108 aaKnown RBP7.87□□□□□ -1.15
SNF8-205ENST00000507302 MTURNQ8N3F0 131 aa7.87□□□□□ -1.15
SNF8-205ENST00000507302 SIGMAR1Q99720 223 aa7.86□□□□□ -1.15
SNF8-205ENST00000507302 SNRPEP62304 92 aaKnown RBP7.85□□□□□ -1.15
SNF8-205ENST00000507302 A0A1W2PNM2 257 aa7.84□□□□□ -1.15
SNF8-205ENST00000507302 C12orf57Q99622 126 aa7.83□□□□□ -1.16
SNF8-205ENST00000507302 IGKV4-1P06312 121 aa7.81□□□□□ -1.16
SNF8-205ENST00000507302 Q8N9P0 234 aaPredicted RBP7.8□□□□□ -1.16
SNF8-205ENST00000507302 H3BMG7 143 aa7.79□□□□□ -1.16
SNF8-205ENST00000507302 FAM218AQ96MZ4 157 aa7.78□□□□□ -1.16
SNF8-205ENST00000507302 LINC00472Q9H8W2 130 aa7.78□□□□□ -1.16
SNF8-205ENST00000507302 TRBV7-4A0A0J9YYF1 115 aa7.76□□□□□ -1.17
SNF8-205ENST00000507302 SPINK7P58062 85 aa7.76□□□□□ -1.17
SNF8-205ENST00000507302 H0YGX0 51 aa7.75□□□□□ -1.17
SNF8-205ENST00000507302 MUC12Q9UKN1 5478 aa7.74□□□□□ -1.17
SNF8-205ENST00000507302 SNCGO76070 127 aa7.73□□□□□ -1.17
SNF8-205ENST00000507302 ZCCHC13Q8WW36 166 aaKnown RBP7.73□□□□□ -1.17
SNF8-205ENST00000507302 KRTAP20-1Q3LI63 56 aa7.72□□□□□ -1.17
SNF8-205ENST00000507302 IGHV6-1A0A0B4J1U7 121 aa7.71□□□□□ -1.18
SNF8-205ENST00000507302 A0A1B0GX51 115 aa7.71□□□□□ -1.18
SNF8-205ENST00000507302 RAB37Q96AX2 223 aa7.71□□□□□ -1.18
SNF8-205ENST00000507302 GHRHP01286 108 aa7.7□□□□□ -1.18
SNF8-205ENST00000507302 DEFB116Q30KQ4 102 aa7.7□□□□□ -1.18
SNF8-205ENST00000507302 C8orf87E5RJ46 101 aa7.69□□□□□ -1.18
SNF8-205ENST00000507302 HIST1H4GQ99525 98 aa7.68□□□□□ -1.18
SNF8-205ENST00000507302 FABP2P12104 132 aa7.67□□□□□ -1.18
SNF8-205ENST00000507302 A0A1B0GVX0 72 aa7.66□□□□□ -1.18
SNF8-205ENST00000507302 WFDC13Q8IUB5 93 aa7.65□□□□□ -1.18
SNF8-205ENST00000507302 ANKRD29Q8N6D5 301 aa7.65□□□□□ -1.18
SNF8-205ENST00000507302 A0A0B4J2C4 111 aa7.64□□□□□ -1.19
SNF8-205ENST00000507302 HSBP1L1C9JCN9 74 aa7.63□□□□□ -1.19
SNF8-205ENST00000507302 KRTAP5-9P26371 169 aa7.61□□□□□ -1.19
SNF8-205ENST00000507302 DLEU1O43261 78 aa7.59□□□□□ -1.19
SNF8-205ENST00000507302 COX8AP10176 69 aa7.59□□□□□ -1.19
SNF8-205ENST00000507302 CCKP06307 115 aa7.58□□□□□ -1.2
SNF8-205ENST00000507302 TRACP01848 142 aa7.57□□□□□ -1.2
SNF8-205ENST00000507302 HIST1H2BLQ99880 126 aa7.57□□□□□ -1.2
SNF8-205ENST00000507302 H3BQ85 93 aa7.56□□□□□ -1.2
SNF8-205ENST00000507302 HIST3H2BBQ8N257 126 aa7.56□□□□□ -1.2
SNF8-205ENST00000507302 A6NN06 94 aa7.55□□□□□ -1.2
SNF8-205ENST00000507302 H1FX-AS1Q4G0G2 97 aa7.55□□□□□ -1.2
SNF8-205ENST00000507302 MT1BP07438 61 aa7.53□□□□□ -1.2
SNF8-205ENST00000507302 ORMDL1Q9P0S3 153 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms