RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 TRBV7-4A0A0J9YYF1 115 aa5□□□□□ -1.61
COL4A5-208ENST00000505728 A0A1B0GV72 72 aa5□□□□□ -1.61
COL4A5-208ENST00000505728 BCE1O60756 84 aa5□□□□□ -1.61
COL4A5-208ENST00000505728 FUSP35637 526 aaKnown RBP eCLIP5□□□□□ -1.61
COL4A5-208ENST00000505728 UBE2AP49459 152 aa5□□□□□ -1.61
COL4A5-208ENST00000505728 XGP55808 180 aa5□□□□□ -1.61
COL4A5-208ENST00000505728 LINC00643Q86TS7 51 aa5□□□□□ -1.61
COL4A5-208ENST00000505728 MT-ATP8P03928 68 aa4.99□□□□□ -1.61
COL4A5-208ENST00000505728 SCGB1A1P11684 91 aa4.99□□□□□ -1.61
COL4A5-208ENST00000505728 KRTAP10-2P60368 255 aa4.99□□□□□ -1.61
COL4A5-208ENST00000505728 PRLHP81277 87 aa4.99□□□□□ -1.61
COL4A5-208ENST00000505728 ST20-AS1Q8NBB2 130 aa4.99□□□□□ -1.61
COL4A5-208ENST00000505728 C4orf48Q5BLP8 95 aa4.98□□□□□ -1.61
COL4A5-208ENST00000505728 HIGD2AQ9BW72 106 aa4.98□□□□□ -1.61
COL4A5-208ENST00000505728 DNAH5Q8TE73 4624 aa4.98□□□□□ -1.61
COL4A5-208ENST00000505728 SPRR1BP22528 89 aa4.97□□□□□ -1.61
COL4A5-208ENST00000505728 Q6Q795 121 aa4.97□□□□□ -1.61
COL4A5-208ENST00000505728 KRTAP13-1Q8IUC0 172 aa4.97□□□□□ -1.61
COL4A5-208ENST00000505728 LINC00846Q9NV44 126 aa4.97□□□□□ -1.61
COL4A5-208ENST00000505728 A0A1B0GW54 56 aa4.96□□□□□ -1.62
COL4A5-208ENST00000505728 SMIM29Q86T20 159 aa4.96□□□□□ -1.62
COL4A5-208ENST00000505728 IGLV8-61A0A075B6I0 122 aa4.95□□□□□ -1.62
COL4A5-208ENST00000505728 F8WEM9 126 aa4.95□□□□□ -1.62
COL4A5-208ENST00000505728 Q6JHZ5 121 aa4.95□□□□□ -1.62
COL4A5-208ENST00000505728 Q6ZSA8 131 aa4.95□□□□□ -1.62
COL4A5-208ENST00000505728 UBL5Q9BZL1 73 aa4.95□□□□□ -1.62
COL4A5-208ENST00000505728 IMUPQ9GZP8 106 aa4.95□□□□□ -1.62
COL4A5-208ENST00000505728 PSORS1C2Q9UIG4 136 aa4.95□□□□□ -1.62
COL4A5-208ENST00000505728 TRBV7-7A0A0K0K1E9 115 aa4.94□□□□□ -1.62
COL4A5-208ENST00000505728 FAM30AQ9NZY2 134 aa4.94□□□□□ -1.62
COL4A5-208ENST00000505728 HERC1Q15751 4861 aa4.94□□□□□ -1.62
COL4A5-208ENST00000505728 ZNF861PO60384 105 aa4.93□□□□□ -1.62
COL4A5-208ENST00000505728 KRTAP10-1P60331 282 aa4.93□□□□□ -1.62
COL4A5-208ENST00000505728 C1orf137Q5JT78 98 aa4.93□□□□□ -1.62
COL4A5-208ENST00000505728 ATP5EP2Q5VTU8 51 aa4.93□□□□□ -1.62
COL4A5-208ENST00000505728 C3orf22Q8N5N4 141 aa4.93□□□□□ -1.62
COL4A5-208ENST00000505728 CIRBP-AS1Q8TBR5 109 aa4.93□□□□□ -1.62
COL4A5-208ENST00000505728 ZNF706Q9Y5V0 76 aaPredicted RBP4.93□□□□□ -1.62
COL4A5-208ENST00000505728 DNAH8Q96JB1 4490 aa4.93□□□□□ -1.62
COL4A5-208ENST00000505728 A0A1W2PNM2 257 aa4.91□□□□□ -1.62
COL4A5-208ENST00000505728 IGLV7-43P04211 117 aa4.91□□□□□ -1.62
COL4A5-208ENST00000505728 SCXQ7RTU7 201 aa4.91□□□□□ -1.62
COL4A5-208ENST00000505728 Q8NBF4 154 aa4.91□□□□□ -1.62
COL4A5-208ENST00000505728 SPRR4Q96PI1 79 aa4.91□□□□□ -1.62
COL4A5-208ENST00000505728 LOC100996750A0A140TA64 210 aa4.9□□□□□ -1.63
COL4A5-208ENST00000505728 PCP4P48539 62 aa4.9□□□□□ -1.63
COL4A5-208ENST00000505728 LINC00483Q53H64 154 aa4.9□□□□□ -1.63
COL4A5-208ENST00000505728 Q6ZVQ6 151 aa4.9□□□□□ -1.63
COL4A5-208ENST00000505728 KRTAP4-6Q9BYQ5 205 aa4.9□□□□□ -1.63
COL4A5-208ENST00000505728 FAT1Q14517 4588 aa4.9□□□□□ -1.63
COL4A5-208ENST00000505728 IGKV3D-7A0A0C4DH55 119 aa4.89□□□□□ -1.63
COL4A5-208ENST00000505728 CDK2AP2O75956 126 aa4.89□□□□□ -1.63
COL4A5-208ENST00000505728 RPL37AP61513 92 aaKnown RBP4.89□□□□□ -1.63
COL4A5-208ENST00000505728 NREPQ16612 68 aa4.89□□□□□ -1.63
COL4A5-208ENST00000505728 IGFL1Q6UW32 110 aa4.89□□□□□ -1.63
COL4A5-208ENST00000505728 CRYGAP11844 174 aa4.88□□□□□ -1.63
COL4A5-208ENST00000505728 HAMPP81172 84 aa4.88□□□□□ -1.63
COL4A5-208ENST00000505728 CXCL6P80162 114 aa4.87□□□□□ -1.63
COL4A5-208ENST00000505728 DMBT1Q9UGM3 2413 aaPredicted RBP4.86□□□□□ -1.63
COL4A5-208ENST00000505728 Q8N1X5 172 aa4.86□□□□□ -1.63
COL4A5-208ENST00000505728 MYCBP2O75592 4640 aa4.85□□□□□ -1.63
COL4A5-208ENST00000505728 SRRM2Q9UQ35 2752 aaKnown RBP4.85□□□□□ -1.63
COL4A5-208ENST00000505728 VPS13BQ7Z7G8 4022 aa4.85□□□□□ -1.63
COL4A5-208ENST00000505728 FAM236AA0A1B0GUQ0 79 aa4.83□□□□□ -1.64
COL4A5-208ENST00000505728 FAM236BA0A1B0GV22 79 aa4.83□□□□□ -1.64
COL4A5-208ENST00000505728 BPY2O14599 106 aa4.83□□□□□ -1.64
COL4A5-208ENST00000505728 HIST1H4AP62805 103 aaKnown RBP4.83□□□□□ -1.64
COL4A5-208ENST00000505728 C9orf153Q5TBE3 101 aa4.83□□□□□ -1.64
COL4A5-208ENST00000505728 IGLV9-49A0A0B4J1Y8 123 aa4.82□□□□□ -1.64
COL4A5-208ENST00000505728 A0A0G2JQZ4 141 aa4.82□□□□□ -1.64
COL4A5-208ENST00000505728 SSBP3-AS1Q7Z2R9 100 aa4.82□□□□□ -1.64
COL4A5-208ENST00000505728 FLG2Q5D862 2391 aaPredicted RBP4.81□□□□□ -1.64
COL4A5-208ENST00000505728 A0A087WSZ3 146 aa4.81□□□□□ -1.64
COL4A5-208ENST00000505728 ANAPC13Q9BS18 74 aa4.81□□□□□ -1.64
COL4A5-208ENST00000505728 A0A087WVE0 104 aa4.8□□□□□ -1.64
COL4A5-208ENST00000505728 ATOX1O00244 68 aa4.8□□□□□ -1.64
COL4A5-208ENST00000505728 FAM229BQ4G0N7 80 aa4.8□□□□□ -1.64
COL4A5-208ENST00000505728 ANAPC11Q9NYG5 84 aa4.8□□□□□ -1.64
COL4A5-208ENST00000505728 MOBPQ13875 183 aa4.79□□□□□ -1.64
COL4A5-208ENST00000505728 IGKV4-1P06312 121 aa4.78□□□□□ -1.64
COL4A5-208ENST00000505728 CD164Q04900 197 aa4.78□□□□□ -1.64
COL4A5-208ENST00000505728 SS18L2Q9UHA2 77 aa4.78□□□□□ -1.64
COL4A5-208ENST00000505728 DSCR10P59022 87 aa4.77□□□□□ -1.65
COL4A5-208ENST00000505728 SPINK6Q6UWN8 80 aa4.77□□□□□ -1.65
COL4A5-208ENST00000505728 LINC00472Q9H8W2 130 aa4.77□□□□□ -1.65
COL4A5-208ENST00000505728 J3KT08 172 aa4.76□□□□□ -1.65
COL4A5-208ENST00000505728 Q5VSD8 79 aa4.75□□□□□ -1.65
COL4A5-208ENST00000505728 SMIM20Q8N5G0 67 aa4.75□□□□□ -1.65
COL4A5-208ENST00000505728 KRTAP1-4P0C5Y4 121 aa4.74□□□□□ -1.65
COL4A5-208ENST00000505728 HRCT1Q6UXD1 115 aa4.74□□□□□ -1.65
COL4A5-208ENST00000505728 SERP2Q8N6R1 65 aa4.74□□□□□ -1.65
COL4A5-208ENST00000505728 Q8N9L7 120 aa4.74□□□□□ -1.65
COL4A5-208ENST00000505728 UQCRQO14949 82 aa4.73□□□□□ -1.65
COL4A5-208ENST00000505728 SMR3BP02814 79 aaPredicted RBP4.73□□□□□ -1.65
COL4A5-208ENST00000505728 COX7CP15954 63 aa4.73□□□□□ -1.65
COL4A5-208ENST00000505728 KRTAP13-2Q52LG2 175 aa4.73□□□□□ -1.65
COL4A5-208ENST00000505728 TRAV7A0A075B6U4 112 aa4.72□□□□□ -1.65
COL4A5-208ENST00000505728 A0A087X002 238 aa4.72□□□□□ -1.65
COL4A5-208ENST00000505728 A8MWP4 228 aa4.72□□□□□ -1.65
COL4A5-208ENST00000505728 K7EQZ3 153 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms