RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 NHP2Q9NX24 153 aaKnown RBP6.47□□□□□ -1.37
SNHG4-202ENST00000505522 FLGP20930 4061 aaPredicted RBP6.46□□□□□ -1.37
SNHG4-202ENST00000505522 TCL1BO95988 128 aa6.46□□□□□ -1.38
SNHG4-202ENST00000505522 M0R2T5 61 aa6.44□□□□□ -1.38
SNHG4-202ENST00000505522 COX6B2Q6YFQ2 88 aa6.44□□□□□ -1.38
SNHG4-202ENST00000505522 F8WEM9 126 aa6.43□□□□□ -1.38
SNHG4-202ENST00000505522 LINC00575Q6W349 94 aa6.43□□□□□ -1.38
SNHG4-202ENST00000505522 FSIP2Q5CZC0 6907 aa6.42□□□□□ -1.38
SNHG4-202ENST00000505522 VAMP3Q15836 100 aa6.41□□□□□ -1.38
SNHG4-202ENST00000505522 IGFL1Q6UW32 110 aa6.41□□□□□ -1.38
SNHG4-202ENST00000505522 Q6ZQY7 126 aa6.41□□□□□ -1.38
SNHG4-202ENST00000505522 TRBV7-7A0A0K0K1E9 115 aa6.4□□□□□ -1.38
SNHG4-202ENST00000505522 hADV29S1A0JD25 119 aa6.4□□□□□ -1.38
SNHG4-202ENST00000505522 Q6JHZ5 121 aa6.4□□□□□ -1.38
SNHG4-202ENST00000505522 SNRPEP62304 92 aaKnown RBP6.39□□□□□ -1.39
SNHG4-202ENST00000505522 CLEC2BQ92478 149 aa6.39□□□□□ -1.39
SNHG4-202ENST00000505522 OCIAD2Q56VL3 154 aa6.38□□□□□ -1.39
SNHG4-202ENST00000505522 OBSCN-AS1Q96MR7 158 aa6.38□□□□□ -1.39
SNHG4-202ENST00000505522 Q75L30 129 aa6.35□□□□□ -1.39
SNHG4-202ENST00000505522 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.34□□□□□ -1.39
SNHG4-202ENST00000505522 ATP11AUNQ6ZP68 121 aa6.34□□□□□ -1.39
SNHG4-202ENST00000505522 HIST3H2BBQ8N257 126 aa6.34□□□□□ -1.39
SNHG4-202ENST00000505522 C12orf57Q99622 126 aa6.34□□□□□ -1.39
SNHG4-202ENST00000505522 H3BUT2 72 aa6.33□□□□□ -1.4
SNHG4-202ENST00000505522 Q6Q795 121 aa6.33□□□□□ -1.4
SNHG4-202ENST00000505522 HIST1H2BLQ99880 126 aa6.33□□□□□ -1.4
SNHG4-202ENST00000505522 HSBP1L1C9JCN9 74 aa6.32□□□□□ -1.4
SNHG4-202ENST00000505522 PPDPFLQ8WWR9 84 aa6.32□□□□□ -1.4
SNHG4-202ENST00000505522 SNHG12Q9BXW3 62 aa6.32□□□□□ -1.4
SNHG4-202ENST00000505522 LST1O00453 97 aa6.31□□□□□ -1.4
SNHG4-202ENST00000505522 BVES-AS1Q5T3Y7 98 aa6.31□□□□□ -1.4
SNHG4-202ENST00000505522 S100A2P29034 98 aa6.3□□□□□ -1.4
SNHG4-202ENST00000505522 Q96NJ1 140 aa6.3□□□□□ -1.4
SNHG4-202ENST00000505522 HIST1H4GQ99525 98 aa6.3□□□□□ -1.4
SNHG4-202ENST00000505522 SCGB1D1O95968 90 aa6.27□□□□□ -1.41
SNHG4-202ENST00000505522 C20orf166-AS1Q96NR2 134 aa6.26□□□□□ -1.41
SNHG4-202ENST00000505522 SS18L2Q9UHA2 77 aa6.26□□□□□ -1.41
SNHG4-202ENST00000505522 A8MUU9 505 aa6.25□□□□□ -1.41
SNHG4-202ENST00000505522 CFC1P0CG37 223 aa6.25□□□□□ -1.41
SNHG4-202ENST00000505522 TEN1Q86WV5 123 aa6.25□□□□□ -1.41
SNHG4-202ENST00000505522 COX8AP10176 69 aa6.24□□□□□ -1.41
SNHG4-202ENST00000505522 FAM218AQ96MZ4 157 aa6.24□□□□□ -1.41
SNHG4-202ENST00000505522 KRTAP9-8Q9BYQ0 159 aa6.24□□□□□ -1.41
SNHG4-202ENST00000505522 A0A087WSZ3 146 aa6.23□□□□□ -1.41
SNHG4-202ENST00000505522 NDUFV3P56181 108 aaKnown RBP6.23□□□□□ -1.41
SNHG4-202ENST00000505522 RAB37Q96AX2 223 aa6.22□□□□□ -1.41
SNHG4-202ENST00000505522 H0YGX0 51 aa6.21□□□□□ -1.42
SNHG4-202ENST00000505522 DLEU1O43261 78 aa6.21□□□□□ -1.42
SNHG4-202ENST00000505522 S100A6P06703 90 aa6.21□□□□□ -1.42
SNHG4-202ENST00000505522 A0A0B4J2C4 111 aa6.2□□□□□ -1.42
SNHG4-202ENST00000505522 SNCGO76070 127 aa6.2□□□□□ -1.42
SNHG4-202ENST00000505522 DSCR10P59022 87 aa6.2□□□□□ -1.42
SNHG4-202ENST00000505522 H3BMG7 143 aa6.19□□□□□ -1.42
SNHG4-202ENST00000505522 C14orf144Q96I85 54 aa6.19□□□□□ -1.42
SNHG4-202ENST00000505522 TRBV20-1A0A075B6N2 111 aa6.18□□□□□ -1.42
SNHG4-202ENST00000505522 KRTAP16-1A8MUX0 517 aa6.18□□□□□ -1.42
SNHG4-202ENST00000505522 A0A1W2PNM2 257 aa6.17□□□□□ -1.42
SNHG4-202ENST00000505522 HIGD1BQ9P298 99 aa6.17□□□□□ -1.42
SNHG4-202ENST00000505522 FABP2P12104 132 aa6.16□□□□□ -1.42
SNHG4-202ENST00000505522 C2orf91Q6ZV80 131 aa6.16□□□□□ -1.42
SNHG4-202ENST00000505522 SIGMAR1Q99720 223 aa6.16□□□□□ -1.42
SNHG4-202ENST00000505522 SPATA45Q537H7 98 aa6.15□□□□□ -1.42
SNHG4-202ENST00000505522 PAM16Q9Y3D7 125 aa6.15□□□□□ -1.42
SNHG4-202ENST00000505522 A0A1B0GX51 115 aa6.14□□□□□ -1.43
SNHG4-202ENST00000505522 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.14□□□□□ -1.43
SNHG4-202ENST00000505522 LINC00313P59037 77 aa6.13□□□□□ -1.43
SNHG4-202ENST00000505522 CEND1Q8N111 149 aa6.13□□□□□ -1.43
SNHG4-202ENST00000505522 PRO1854Q9UHT4 67 aa6.13□□□□□ -1.43
SNHG4-202ENST00000505522 USH2AO75445 5202 aa6.12□□□□□ -1.43
SNHG4-202ENST00000505522 TRIAP1O43715 76 aa6.12□□□□□ -1.43
SNHG4-202ENST00000505522 GHRHP01286 108 aa6.12□□□□□ -1.43
SNHG4-202ENST00000505522 MT2AP02795 61 aa6.12□□□□□ -1.43
SNHG4-202ENST00000505522 IGKV4-1P06312 121 aa6.12□□□□□ -1.43
SNHG4-202ENST00000505522 NOTCH2NLQ7Z3S9 236 aa6.12□□□□□ -1.43
SNHG4-202ENST00000505522 A0A1B0GV72 72 aa6.11□□□□□ -1.43
SNHG4-202ENST00000505522 KRTAP9-7A8MTY7 169 aa6.11□□□□□ -1.43
SNHG4-202ENST00000505522 FAM236DA0A1B0GTK5 79 aa6.1□□□□□ -1.43
SNHG4-202ENST00000505522 FAM236CP0DP71 79 aa6.1□□□□□ -1.43
SNHG4-202ENST00000505522 HRES1P13985 223 aa6.1□□□□□ -1.43
SNHG4-202ENST00000505522 S100A1P23297 94 aa6.1□□□□□ -1.43
SNHG4-202ENST00000505522 FXYD2P54710 66 aa6.1□□□□□ -1.43
SNHG4-202ENST00000505522 ANKRD29Q8N6D5 301 aa6.1□□□□□ -1.43
SNHG4-202ENST00000505522 MPLKIPQ8TAP9 179 aa6.1□□□□□ -1.43
SNHG4-202ENST00000505522 VAMP8Q9BV40 100 aa6.1□□□□□ -1.43
SNHG4-202ENST00000505522 SSPOA2VEC9 5147 aa6.09□□□□□ -1.43
SNHG4-202ENST00000505522 TRBV7-4A0A0J9YYF1 115 aa6.09□□□□□ -1.43
SNHG4-202ENST00000505522 DEFB116Q30KQ4 102 aa6.09□□□□□ -1.43
SNHG4-202ENST00000505522 TMEM238LA0A1B0GVL6 79 aa6.08□□□□□ -1.44
SNHG4-202ENST00000505522 A6NJY4 79 aa6.08□□□□□ -1.44
SNHG4-202ENST00000505522 MT1FP04733 61 aa6.08□□□□□ -1.44
SNHG4-202ENST00000505522 LINC00472Q9H8W2 130 aa6.08□□□□□ -1.44
SNHG4-202ENST00000505522 ORMDL1Q9P0S3 153 aa6.07□□□□□ -1.44
SNHG4-202ENST00000505522 RBM12B-AS1Q9P1G2 102 aa6.06□□□□□ -1.44
SNHG4-202ENST00000505522 IGHV6-1A0A0B4J1U7 121 aa6.05□□□□□ -1.44
SNHG4-202ENST00000505522 DNAL4O96015 105 aa6.05□□□□□ -1.44
SNHG4-202ENST00000505522 KRTAP9-3Q9BYQ3 159 aa6.05□□□□□ -1.44
SNHG4-202ENST00000505522 CCKP06307 115 aa6.04□□□□□ -1.44
SNHG4-202ENST00000505522 H3BQ85 93 aa6.03□□□□□ -1.44
SNHG4-202ENST00000505522 TMEM256-PLSCR3K7ERE1 68 aa6.03□□□□□ -1.44
SNHG4-202ENST00000505522 K7ERJ3 54 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms