RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 URB1-AS1Q96HZ7 61 aa5.81□□□□□ -1.48
LSM6-204ENST00000504181 LST1O00453 97 aa5.8□□□□□ -1.48
LSM6-204ENST00000504181 DSCR10P59022 87 aa5.8□□□□□ -1.48
LSM6-204ENST00000504181 SPRR2FQ96RM1 72 aa5.8□□□□□ -1.48
LSM6-204ENST00000504181 F8WEM9 126 aa5.79□□□□□ -1.48
LSM6-204ENST00000504181 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
LSM6-204ENST00000504181 IFITM2Q01629 132 aa5.79□□□□□ -1.48
LSM6-204ENST00000504181 TRAV12-1A0A0B4J245 112 aa5.77□□□□□ -1.49
LSM6-204ENST00000504181 LEPROTO15243 131 aa5.77□□□□□ -1.49
LSM6-204ENST00000504181 MT1BP07438 61 aa5.77□□□□□ -1.49
LSM6-204ENST00000504181 LINC00614P0C842 121 aa5.77□□□□□ -1.49
LSM6-204ENST00000504181 ADAMTSL4-AS1Q5T5F5 129 aa5.77□□□□□ -1.49
LSM6-204ENST00000504181 CLEC2BQ92478 149 aa5.77□□□□□ -1.49
LSM6-204ENST00000504181 SPANXDQ9BXN6 97 aa5.75□□□□□ -1.49
LSM6-204ENST00000504181 J3QQQ9 107 aa5.74□□□□□ -1.49
LSM6-204ENST00000504181 FABP9Q0Z7S8 132 aa5.74□□□□□ -1.49
LSM6-204ENST00000504181 SPANXCQ9NY87 97 aa5.74□□□□□ -1.49
LSM6-204ENST00000504181 Q6JHZ5 121 aa5.73□□□□□ -1.49
LSM6-204ENST00000504181 LINC00518Q8N0U6 118 aa5.72□□□□□ -1.49
LSM6-204ENST00000504181 C18orf32Q8TCD1 76 aa5.72□□□□□ -1.49
LSM6-204ENST00000504181 IFI27L1Q96BM0 104 aa5.72□□□□□ -1.49
LSM6-204ENST00000504181 TRBV7-6A0A0J9YX20 115 aa5.71□□□□□ -1.5
LSM6-204ENST00000504181 A0A1B0GWB2 263 aa5.71□□□□□ -1.5
LSM6-204ENST00000504181 SPRR2DP22532 72 aa5.71□□□□□ -1.5
LSM6-204ENST00000504181 NMUP48645 174 aa5.71□□□□□ -1.5
LSM6-204ENST00000504181 Q5VV11 94 aa5.71□□□□□ -1.5
LSM6-204ENST00000504181 SEC11CQ9BY50 192 aa5.7□□□□□ -1.5
LSM6-204ENST00000504181 A0A0J9YXY3 114 aa5.69□□□□□ -1.5
LSM6-204ENST00000504181 LCE1AQ5T7P2 110 aa5.69□□□□□ -1.5
LSM6-204ENST00000504181 LINC00308Q8TCZ7 52 aa5.69□□□□□ -1.5
LSM6-204ENST00000504181 H0Y8G0 127 aa5.68□□□□□ -1.5
LSM6-204ENST00000504181 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
LSM6-204ENST00000504181 TRAV13-2A0A0B4J235 113 aa5.66□□□□□ -1.5
LSM6-204ENST00000504181 A0A1W2PNM2 257 aa5.66□□□□□ -1.5
LSM6-204ENST00000504181 KRTAP23-1A1A580 65 aa5.66□□□□□ -1.5
LSM6-204ENST00000504181 SLC7A5P1Q8MH63 180 aa5.66□□□□□ -1.5
LSM6-204ENST00000504181 LINC00313P59037 77 aa5.65□□□□□ -1.5
LSM6-204ENST00000504181 SS18L2Q9UHA2 77 aa5.65□□□□□ -1.5
LSM6-204ENST00000504181 ZNF815PA8K554 130 aa5.64□□□□□ -1.51
LSM6-204ENST00000504181 COLCA2A8K830 154 aa5.64□□□□□ -1.51
LSM6-204ENST00000504181 COX19Q49B96 90 aa5.64□□□□□ -1.51
LSM6-204ENST00000504181 OCIAD2Q56VL3 154 aa5.64□□□□□ -1.51
LSM6-204ENST00000504181 NHP2Q9NX24 153 aaKnown RBP5.64□□□□□ -1.51
LSM6-204ENST00000504181 HERVK_113P61574 105 aa5.63□□□□□ -1.51
LSM6-204ENST00000504181 SIGMAR1Q99720 223 aa5.63□□□□□ -1.51
LSM6-204ENST00000504181 S100PP25815 95 aa5.62□□□□□ -1.51
LSM6-204ENST00000504181 SPINK7P58062 85 aa5.62□□□□□ -1.51
LSM6-204ENST00000504181 LITAFQ99732 161 aa5.62□□□□□ -1.51
LSM6-204ENST00000504181 A4D1N5 150 aa5.61□□□□□ -1.51
LSM6-204ENST00000504181 KRTAP19-8Q3LI54 63 aa5.61□□□□□ -1.51
LSM6-204ENST00000504181 WFDC13Q8IUB5 93 aa5.61□□□□□ -1.51
LSM6-204ENST00000504181 FAM218AQ96MZ4 157 aa5.61□□□□□ -1.51
LSM6-204ENST00000504181 H3BUT2 72 aa5.58□□□□□ -1.52
LSM6-204ENST00000504181 SERF1AO75920 110 aa5.58□□□□□ -1.52
LSM6-204ENST00000504181 PLNP26678 52 aa5.58□□□□□ -1.52
LSM6-204ENST00000504181 Q6ZQY7 126 aa5.58□□□□□ -1.52
LSM6-204ENST00000504181 A6NDN8 102 aa5.57□□□□□ -1.52
LSM6-204ENST00000504181 IMUPQ9GZP8 106 aa5.57□□□□□ -1.52
LSM6-204ENST00000504181 TRAPPC1Q9Y5R8 145 aa5.57□□□□□ -1.52
LSM6-204ENST00000504181 PMCHL2Q9BQD1 86 aa5.56□□□□□ -1.52
LSM6-204ENST00000504181 A0A087WSZ3 146 aa5.55□□□□□ -1.52
LSM6-204ENST00000504181 DPM2O94777 84 aa5.55□□□□□ -1.52
LSM6-204ENST00000504181 TIMM17BO60830 172 aa5.54□□□□□ -1.52
LSM6-204ENST00000504181 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
LSM6-204ENST00000504181 CHCHD1Q96BP2 118 aaKnown RBP5.53□□□□□ -1.52
LSM6-204ENST00000504181 FAM236AA0A1B0GUQ0 79 aa5.52□□□□□ -1.53
LSM6-204ENST00000504181 FAM236BA0A1B0GV22 79 aa5.52□□□□□ -1.53
LSM6-204ENST00000504181 IGKCP01834 107 aa5.52□□□□□ -1.53
LSM6-204ENST00000504181 KRTAP8-1Q8IUC2 63 aa5.52□□□□□ -1.53
LSM6-204ENST00000504181 SMIM11BQ8TCY0 68 aa5.52□□□□□ -1.53
LSM6-204ENST00000504181 ZCCHC13Q8WW36 166 aaKnown RBP5.52□□□□□ -1.53
LSM6-204ENST00000504181 TEN1Q86WV5 123 aa5.51□□□□□ -1.53
LSM6-204ENST00000504181 SPRR2GQ9BYE4 73 aa5.51□□□□□ -1.53
LSM6-204ENST00000504181 hCG_2014768A0A024R1R8 64 aa5.5□□□□□ -1.53
LSM6-204ENST00000504181 E9PLD3 99 aa5.5□□□□□ -1.53
LSM6-204ENST00000504181 IGKV4-1P06312 121 aa5.5□□□□□ -1.53
LSM6-204ENST00000504181 H1FX-AS1Q4G0G2 97 aa5.5□□□□□ -1.53
LSM6-204ENST00000504181 LINC00575Q6W349 94 aa5.5□□□□□ -1.53
LSM6-204ENST00000504181 SNHG12Q9BXW3 62 aa5.5□□□□□ -1.53
LSM6-204ENST00000504181 hADV29S1A0JD25 119 aa5.49□□□□□ -1.53
LSM6-204ENST00000504181 SCGB1D1O95968 90 aa5.49□□□□□ -1.53
LSM6-204ENST00000504181 C21orf62-AS1Q17RA5 79 aa5.49□□□□□ -1.53
LSM6-204ENST00000504181 IGHV6-1A0A0B4J1U7 121 aa5.47□□□□□ -1.53
LSM6-204ENST00000504181 HSBP1O75506 76 aa5.47□□□□□ -1.53
LSM6-204ENST00000504181 LEPROTL1O95214 131 aa5.46□□□□□ -1.54
LSM6-204ENST00000504181 VAMP3Q15836 100 aa5.45□□□□□ -1.54
LSM6-204ENST00000504181 HSPB8Q9UJY1 196 aa5.45□□□□□ -1.54
LSM6-204ENST00000504181 TTTY13Q9BZ97 58 aa5.44□□□□□ -1.54
LSM6-204ENST00000504181 DEFB116Q30KQ4 102 aa5.43□□□□□ -1.54
LSM6-204ENST00000504181 PPDPFLQ8WWR9 84 aa5.43□□□□□ -1.54
LSM6-204ENST00000504181 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.42□□□□□ -1.54
LSM6-204ENST00000504181 DSTQ03001 7570 aaKnown RBP5.41□□□□□ -1.54
LSM6-204ENST00000504181 FABP4P15090 132 aa5.4□□□□□ -1.54
LSM6-204ENST00000504181 TMA7Q9Y2S6 64 aaKnown RBP5.4□□□□□ -1.54
LSM6-204ENST00000504181 TMEM218A2RU14 115 aa5.38□□□□□ -1.55
LSM6-204ENST00000504181 COPS9Q8WXC6 57 aa5.38□□□□□ -1.55
LSM6-204ENST00000504181 C3orf79P0CE67 100 aa5.37□□□□□ -1.55
LSM6-204ENST00000504181 MUSTN1Q8IVN3 82 aa5.37□□□□□ -1.55
LSM6-204ENST00000504181 IFITM1P13164 125 aa5.36□□□□□ -1.55
LSM6-204ENST00000504181 C8orf87E5RJ46 101 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms