RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 KRTAP10-4P60372 401 aaPredicted RBP1.94□□□□□ -2.1
UBE3D-205ENST00000503942 KRTDAPP60985 99 aa1.94□□□□□ -2.1
UBE3D-205ENST00000503942 CKS1BP61024 79 aa1.94□□□□□ -2.1
UBE3D-205ENST00000503942 CIRBPQ14011 172 aaKnown RBP1.94□□□□□ -2.1
UBE3D-205ENST00000503942 LINC01545Q5VT33 79 aa1.94□□□□□ -2.1
UBE3D-205ENST00000503942 PHF5AQ7RTV0 110 aaKnown RBP1.94□□□□□ -2.1
UBE3D-205ENST00000503942 Q8IZM0 81 aa1.94□□□□□ -2.1
UBE3D-205ENST00000503942 Q8NDZ9 215 aa1.94□□□□□ -2.1
UBE3D-205ENST00000503942 ZCCHC13Q8WW36 166 aaKnown RBP1.94□□□□□ -2.1
UBE3D-205ENST00000503942 DPH3Q96FX2 82 aa1.94□□□□□ -2.1
UBE3D-205ENST00000503942 TTTY13Q9BZ97 58 aa1.94□□□□□ -2.1
UBE3D-205ENST00000503942 XAGE1AQ9HD64 81 aa1.94□□□□□ -2.1
UBE3D-205ENST00000503942 PLAC8Q9NZF1 115 aa1.94□□□□□ -2.1
UBE3D-205ENST00000503942 PCLOQ9Y6V0 5065 aa1.93□□□□□ -2.1
UBE3D-205ENST00000503942 A0A1B0GU33 70 aa1.93□□□□□ -2.1
UBE3D-205ENST00000503942 H3BRM9 83 aa1.93□□□□□ -2.1
UBE3D-205ENST00000503942 IGKCP01834 107 aa1.93□□□□□ -2.1
UBE3D-205ENST00000503942 SMIM13P0DJ93 91 aa1.93□□□□□ -2.1
UBE3D-205ENST00000503942 S100A2P29034 98 aa1.93□□□□□ -2.1
UBE3D-205ENST00000503942 Q5VSD8 79 aa1.93□□□□□ -2.1
UBE3D-205ENST00000503942 FAM19A5Q7Z5A7 132 aaPredicted RBP1.93□□□□□ -2.1
UBE3D-205ENST00000503942 TP73-AS1Q9UF72 201 aa1.93□□□□□ -2.1
UBE3D-205ENST00000503942 NDUFA12Q9UI09 145 aa1.93□□□□□ -2.1
UBE3D-205ENST00000503942 TRBV30A0A0K0K1B3 111 aa1.92□□□□□ -2.1
UBE3D-205ENST00000503942 A6NED7 52 aa1.92□□□□□ -2.1
UBE3D-205ENST00000503942 C8orf87E5RJ46 101 aa1.92□□□□□ -2.1
UBE3D-205ENST00000503942 J3QQQ9 107 aa1.92□□□□□ -2.1
UBE3D-205ENST00000503942 LEPROTO15243 131 aa1.92□□□□□ -2.1
UBE3D-205ENST00000503942 S100A6P06703 90 aa1.92□□□□□ -2.1
UBE3D-205ENST00000503942 PLNP26678 52 aa1.92□□□□□ -2.1
UBE3D-205ENST00000503942 DAND5Q8N907 189 aa1.92□□□□□ -2.1
UBE3D-205ENST00000503942 PLEKHB2Q96CS7 222 aa1.92□□□□□ -2.1
UBE3D-205ENST00000503942 ERG28Q9UKR5 140 aa1.92□□□□□ -2.1
UBE3D-205ENST00000503942 TNXBP22105 4242 aa1.91□□□□□ -2.1
UBE3D-205ENST00000503942 A0A1W2PNM2 257 aa1.91□□□□□ -2.1
UBE3D-205ENST00000503942 LINC00158P58513 81 aa1.91□□□□□ -2.1
UBE3D-205ENST00000503942 RPL37AP61513 92 aaKnown RBP1.91□□□□□ -2.1
UBE3D-205ENST00000503942 SOSTDC1Q6X4U4 206 aa1.91□□□□□ -2.1
UBE3D-205ENST00000503942 PSORS1C2Q9UIG4 136 aa1.91□□□□□ -2.1
UBE3D-205ENST00000503942 C22orf24Q9Y442 160 aa1.91□□□□□ -2.1
UBE3D-205ENST00000503942 MYMXA0A1B0GTQ4 84 aa1.9□□□□□ -2.11
UBE3D-205ENST00000503942 ZNF815PA8K554 130 aa1.9□□□□□ -2.11
UBE3D-205ENST00000503942 NPC2P61916 151 aa1.9□□□□□ -2.11
UBE3D-205ENST00000503942 PYY3Q5JQD4 70 aa1.9□□□□□ -2.11
UBE3D-205ENST00000503942 MEIG1Q5JSS6 88 aa1.9□□□□□ -2.11
UBE3D-205ENST00000503942 LINC00474Q9P2X8 69 aa1.9□□□□□ -2.11
UBE3D-205ENST00000503942 C20orf202A1L168 122 aa1.89□□□□□ -2.11
UBE3D-205ENST00000503942 TMEM238C9JI98 176 aa1.89□□□□□ -2.11
UBE3D-205ENST00000503942 NCR3O14931 201 aa1.89□□□□□ -2.11
UBE3D-205ENST00000503942 KRTAP12-3P60328 96 aa1.89□□□□□ -2.11
UBE3D-205ENST00000503942 UBE2BP63146 152 aa1.89□□□□□ -2.11
UBE3D-205ENST00000503942 BOD1L2Q8IYS8 172 aa1.89□□□□□ -2.11
UBE3D-205ENST00000503942 HERC1Q15751 4861 aa1.89□□□□□ -2.11
UBE3D-205ENST00000503942 COX17Q14061 63 aa1.88□□□□□ -2.11
UBE3D-205ENST00000503942 JOSD1Q15040 202 aaPredicted RBP1.88□□□□□ -2.11
UBE3D-205ENST00000503942 C1orf137Q5JT78 98 aa1.88□□□□□ -2.11
UBE3D-205ENST00000503942 LINC00308Q8TCZ7 52 aa1.88□□□□□ -2.11
UBE3D-205ENST00000503942 C14orf144Q96I85 54 aa1.88□□□□□ -2.11
UBE3D-205ENST00000503942 PKIGQ9Y2B9 76 aa1.88□□□□□ -2.11
UBE3D-205ENST00000503942 DMBT1Q9UGM3 2413 aaPredicted RBP1.87□□□□□ -2.11
UBE3D-205ENST00000503942 TRBV10-3A0A0K0K1G6 114 aa1.87□□□□□ -2.11
UBE3D-205ENST00000503942 M0R378 163 aa1.87□□□□□ -2.11
UBE3D-205ENST00000503942 TIMM17BO60830 172 aa1.87□□□□□ -2.11
UBE3D-205ENST00000503942 MT1HL1P0DM35 61 aa1.87□□□□□ -2.11
UBE3D-205ENST00000503942 COX8AP10176 69 aa1.87□□□□□ -2.11
UBE3D-205ENST00000503942 AKR1D1P51857 326 aa1.87□□□□□ -2.11
UBE3D-205ENST00000503942 MP68P56378 58 aa1.87□□□□□ -2.11
UBE3D-205ENST00000503942 SPATA45Q537H7 98 aa1.87□□□□□ -2.11
UBE3D-205ENST00000503942 SFTA2Q6UW10 78 aa1.87□□□□□ -2.11
UBE3D-205ENST00000503942 SCGB1D4Q6XE38 83 aa1.87□□□□□ -2.11
UBE3D-205ENST00000503942 C2orf91Q6ZV80 131 aa1.87□□□□□ -2.11
UBE3D-205ENST00000503942 MUSTN1Q8IVN3 82 aa1.87□□□□□ -2.11
UBE3D-205ENST00000503942 HIGD2AQ9BW72 106 aa1.87□□□□□ -2.11
UBE3D-205ENST00000503942 SPANXDQ9BXN6 97 aa1.87□□□□□ -2.11
UBE3D-205ENST00000503942 SPANXCQ9NY87 97 aa1.87□□□□□ -2.11
UBE3D-205ENST00000503942 LOC107984156A0A0G2JMH3 177 aa1.86□□□□□ -2.11
UBE3D-205ENST00000503942 LOC105371267A0A1B0GV96 52 aa1.86□□□□□ -2.11
UBE3D-205ENST00000503942 LINC00587B1AMM8 73 aa1.86□□□□□ -2.11
UBE3D-205ENST00000503942 HSBP1L1C9JCN9 74 aa1.86□□□□□ -2.11
UBE3D-205ENST00000503942 BCE1O60756 84 aa1.86□□□□□ -2.11
UBE3D-205ENST00000503942 ERC2-IT1O76042 136 aa1.86□□□□□ -2.11
UBE3D-205ENST00000503942 PRLHP81277 87 aa1.86□□□□□ -2.11
UBE3D-205ENST00000503942 ARL17AQ8IVW1 177 aa1.86□□□□□ -2.11
UBE3D-205ENST00000503942 C12orf57Q99622 126 aa1.86□□□□□ -2.11
UBE3D-205ENST00000503942 VAMP8Q9BV40 100 aa1.86□□□□□ -2.11
UBE3D-205ENST00000503942 TMEM126AQ9H061 195 aa1.86□□□□□ -2.11
UBE3D-205ENST00000503942 FCGBPQ9Y6R7 5405 aaPredicted RBP1.86□□□□□ -2.11
UBE3D-205ENST00000503942 ZNF73O43830 326 aaPredicted RBP1.85□□□□□ -2.11
UBE3D-205ENST00000503942 NDUFC2O95298 119 aa1.85□□□□□ -2.11
UBE3D-205ENST00000503942 DDTP30046 118 aa1.85□□□□□ -2.11
UBE3D-205ENST00000503942 SPRR1AP35321 89 aa1.85□□□□□ -2.11
UBE3D-205ENST00000503942 SPINK6Q6UWN8 80 aa1.85□□□□□ -2.11
UBE3D-205ENST00000503942 OR13C6PQ8NH95 151 aa1.85□□□□□ -2.11
UBE3D-205ENST00000503942 MIEN1Q9BRT3 115 aa1.85□□□□□ -2.11
UBE3D-205ENST00000503942 PRO1933Q9H354 126 aa1.85□□□□□ -2.11
UBE3D-205ENST00000503942 KCNQ1DNQ9H478 68 aa1.85□□□□□ -2.11
UBE3D-205ENST00000503942 SPANXB1Q9NS25 103 aaPredicted RBP1.85□□□□□ -2.11
UBE3D-205ENST00000503942 TRAV23DV6A0A075B6W5 121 aa1.84□□□□□ -2.11
UBE3D-205ENST00000503942 TRBV10-2A0A0K0K1G8 114 aa1.84□□□□□ -2.11
UBE3D-205ENST00000503942 DLEU1O43261 78 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms