RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 SERF1AO75920 110 aa7.71□□□□□ -1.18
PDLIM7-210ENST00000503827 A6NDN8 102 aa7.7□□□□□ -1.18
PDLIM7-210ENST00000503827 HRES1P13985 223 aa7.7□□□□□ -1.18
PDLIM7-210ENST00000503827 SLC7A5P1Q8MH63 180 aa7.7□□□□□ -1.18
PDLIM7-210ENST00000503827 KRTAP16-1A8MUX0 517 aa7.69□□□□□ -1.18
PDLIM7-210ENST00000503827 FABP4P15090 132 aa7.69□□□□□ -1.18
PDLIM7-210ENST00000503827 OCIAD2Q56VL3 154 aa7.67□□□□□ -1.18
PDLIM7-210ENST00000503827 Q6ZVH6 145 aa7.66□□□□□ -1.18
PDLIM7-210ENST00000503827 MTURNQ8N3F0 131 aa7.65□□□□□ -1.18
PDLIM7-210ENST00000503827 SS18L2Q9UHA2 77 aa7.65□□□□□ -1.18
PDLIM7-210ENST00000503827 MUC12Q9UKN1 5478 aa7.64□□□□□ -1.19
PDLIM7-210ENST00000503827 DSCR10P59022 87 aa7.63□□□□□ -1.19
PDLIM7-210ENST00000503827 COPS9Q8WXC6 57 aa7.63□□□□□ -1.19
PDLIM7-210ENST00000503827 A8MWP4 228 aa7.62□□□□□ -1.19
PDLIM7-210ENST00000503827 Q6ZQY7 126 aa7.62□□□□□ -1.19
PDLIM7-210ENST00000503827 NOTCH2NLQ7Z3S9 236 aa7.62□□□□□ -1.19
PDLIM7-210ENST00000503827 Q8N9P0 234 aaPredicted RBP7.62□□□□□ -1.19
PDLIM7-210ENST00000503827 SMIM11BQ8TCY0 68 aa7.62□□□□□ -1.19
PDLIM7-210ENST00000503827 LINC00310P59036 64 aa7.61□□□□□ -1.19
PDLIM7-210ENST00000503827 VAMP3Q15836 100 aa7.6□□□□□ -1.19
PDLIM7-210ENST00000503827 LINC00575Q6W349 94 aa7.59□□□□□ -1.19
PDLIM7-210ENST00000503827 TTTY13Q9BZ97 58 aa7.59□□□□□ -1.19
PDLIM7-210ENST00000503827 hADV29S1A0JD25 119 aa7.58□□□□□ -1.2
PDLIM7-210ENST00000503827 IFITM1P13164 125 aa7.58□□□□□ -1.2
PDLIM7-210ENST00000503827 SCGB1D1O95968 90 aa7.57□□□□□ -1.2
PDLIM7-210ENST00000503827 ANKRD39Q53RE8 183 aa7.57□□□□□ -1.2
PDLIM7-210ENST00000503827 YPEL4Q96NS1 127 aa7.57□□□□□ -1.2
PDLIM7-210ENST00000503827 APOC3P02656 99 aa7.56□□□□□ -1.2
PDLIM7-210ENST00000503827 SCGB1D4Q6XE38 83 aa7.56□□□□□ -1.2
PDLIM7-210ENST00000503827 H3BUT2 72 aa7.55□□□□□ -1.2
PDLIM7-210ENST00000503827 SNAPINO95295 136 aa7.55□□□□□ -1.2
PDLIM7-210ENST00000503827 LINC00313P59037 77 aa7.55□□□□□ -1.2
PDLIM7-210ENST00000503827 SNHG12Q9BXW3 62 aa7.55□□□□□ -1.2
PDLIM7-210ENST00000503827 TRGC2P03986 189 aa7.53□□□□□ -1.2
PDLIM7-210ENST00000503827 MUSTN1Q8IVN3 82 aa7.53□□□□□ -1.2
PDLIM7-210ENST00000503827 PPDPFLQ8WWR9 84 aa7.53□□□□□ -1.2
PDLIM7-210ENST00000503827 SVBPQ8N300 66 aa7.52□□□□□ -1.21
PDLIM7-210ENST00000503827 SYS1-DBNDD2H3BUS1 97 aa7.51□□□□□ -1.21
PDLIM7-210ENST00000503827 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.51□□□□□ -1.21
PDLIM7-210ENST00000503827 TEN1Q86WV5 123 aa7.51□□□□□ -1.21
PDLIM7-210ENST00000503827 SIGMAR1Q99720 223 aa7.51□□□□□ -1.21
PDLIM7-210ENST00000503827 A0A087WSZ3 146 aa7.5□□□□□ -1.21
PDLIM7-210ENST00000503827 COLCA2A8K830 154 aa7.5□□□□□ -1.21
PDLIM7-210ENST00000503827 NDUFA5Q16718 116 aa7.5□□□□□ -1.21
PDLIM7-210ENST00000503827 LINC01545Q5VT33 79 aa7.47□□□□□ -1.21
PDLIM7-210ENST00000503827 A6NN06 94 aa7.44□□□□□ -1.22
PDLIM7-210ENST00000503827 PET117Q6UWS5 81 aa7.43□□□□□ -1.22
PDLIM7-210ENST00000503827 IGKV4-1P06312 121 aa7.42□□□□□ -1.22
PDLIM7-210ENST00000503827 GHRHP01286 108 aa7.4□□□□□ -1.22
PDLIM7-210ENST00000503827 KRTAP2-3P0C7H8 128 aa7.4□□□□□ -1.22
PDLIM7-210ENST00000503827 KRTAP5-9P26371 169 aa7.4□□□□□ -1.22
PDLIM7-210ENST00000503827 SPINK7P58062 85 aa7.4□□□□□ -1.22
PDLIM7-210ENST00000503827 KRTAP2-4Q9BYR9 128 aa7.4□□□□□ -1.22
PDLIM7-210ENST00000503827 C12orf57Q99622 126 aa7.38□□□□□ -1.23
PDLIM7-210ENST00000503827 BVES-AS1Q5T3Y7 98 aa7.37□□□□□ -1.23
PDLIM7-210ENST00000503827 NDUFV3P56181 108 aaKnown RBP7.36□□□□□ -1.23
PDLIM7-210ENST00000503827 IGHV6-1A0A0B4J1U7 121 aa7.34□□□□□ -1.23
PDLIM7-210ENST00000503827 ZCCHC13Q8WW36 166 aaKnown RBP7.34□□□□□ -1.23
PDLIM7-210ENST00000503827 WFDC13Q8IUB5 93 aa7.33□□□□□ -1.24
PDLIM7-210ENST00000503827 H3BMG7 143 aa7.32□□□□□ -1.24
PDLIM7-210ENST00000503827 MDN1Q9NU22 5596 aa7.31□□□□□ -1.24
PDLIM7-210ENST00000503827 A0A1W2PNM2 257 aa7.31□□□□□ -1.24
PDLIM7-210ENST00000503827 C3orf79P0CE67 100 aa7.31□□□□□ -1.24
PDLIM7-210ENST00000503827 KMT2DO14686 5537 aa7.3□□□□□ -1.24
PDLIM7-210ENST00000503827 DEFB116Q30KQ4 102 aa7.3□□□□□ -1.24
PDLIM7-210ENST00000503827 FAM218AQ96MZ4 157 aa7.3□□□□□ -1.24
PDLIM7-210ENST00000503827 SNCGO76070 127 aa7.29□□□□□ -1.24
PDLIM7-210ENST00000503827 C8orf87E5RJ46 101 aa7.27□□□□□ -1.25
PDLIM7-210ENST00000503827 KRTDAPP60985 99 aa7.27□□□□□ -1.25
PDLIM7-210ENST00000503827 ATOH7Q8N100 152 aa7.25□□□□□ -1.25
PDLIM7-210ENST00000503827 LINC00472Q9H8W2 130 aa7.25□□□□□ -1.25
PDLIM7-210ENST00000503827 TRBV7-4A0A0J9YYF1 115 aa7.23□□□□□ -1.25
PDLIM7-210ENST00000503827 RAB37Q96AX2 223 aa7.23□□□□□ -1.25
PDLIM7-210ENST00000503827 MT1BP07438 61 aa7.22□□□□□ -1.25
PDLIM7-210ENST00000503827 FABP2P12104 132 aa7.22□□□□□ -1.25
PDLIM7-210ENST00000503827 H1FX-AS1Q4G0G2 97 aa7.22□□□□□ -1.25
PDLIM7-210ENST00000503827 Q5VV11 94 aa7.22□□□□□ -1.25
PDLIM7-210ENST00000503827 A0A1B0GVX0 72 aa7.21□□□□□ -1.26
PDLIM7-210ENST00000503827 KRTAP10-5P60370 271 aa7.21□□□□□ -1.26
PDLIM7-210ENST00000503827 HIST1H2BKO60814 126 aa7.2□□□□□ -1.26
PDLIM7-210ENST00000503827 HIST1H2BJP06899 126 aa7.2□□□□□ -1.26
PDLIM7-210ENST00000503827 HIST1H2BOP23527 126 aa7.2□□□□□ -1.26
PDLIM7-210ENST00000503827 HIST1H2BBP33778 126 aa7.2□□□□□ -1.26
PDLIM7-210ENST00000503827 HIST1H2BDP58876 126 aa7.2□□□□□ -1.26
PDLIM7-210ENST00000503827 HIST1H2BCP62807 126 aa7.2□□□□□ -1.26
PDLIM7-210ENST00000503827 HIST2H2BEQ16778 126 aa7.2□□□□□ -1.26
PDLIM7-210ENST00000503827 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.2□□□□□ -1.26
PDLIM7-210ENST00000503827 HIST1H2BHQ93079 126 aa7.2□□□□□ -1.26
PDLIM7-210ENST00000503827 HIST1H2BNQ99877 126 aa7.2□□□□□ -1.26
PDLIM7-210ENST00000503827 HIST1H2BMQ99879 126 aa7.2□□□□□ -1.26
PDLIM7-210ENST00000503827 ANKRD29Q8N6D5 301 aa7.19□□□□□ -1.26
PDLIM7-210ENST00000503827 H0YGX0 51 aa7.18□□□□□ -1.26
PDLIM7-210ENST00000503827 LYRM7Q5U5X0 104 aa7.17□□□□□ -1.26
PDLIM7-210ENST00000503827 SNRPEP62304 92 aaKnown RBP7.16□□□□□ -1.26
PDLIM7-210ENST00000503827 TRACP01848 142 aa7.13□□□□□ -1.27
PDLIM7-210ENST00000503827 KRTAP2-2Q9BYT5 123 aa7.13□□□□□ -1.27
PDLIM7-210ENST00000503827 KRTAP2-1Q9BYU5 128 aa7.13□□□□□ -1.27
PDLIM7-210ENST00000503827 KRTAP19-8Q3LI54 63 aa7.12□□□□□ -1.27
PDLIM7-210ENST00000503827 A0A1B0GX51 115 aa7.11□□□□□ -1.27
PDLIM7-210ENST00000503827 CCKP06307 115 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms