RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 TRAV13-2A0A0B4J235 113 aa5.81□□□□□ -1.48
CDK9-205ENST00000498339 LINC00310P59036 64 aa5.81□□□□□ -1.48
CDK9-205ENST00000498339 KRTAP19-6Q3LI70 58 aa5.81□□□□□ -1.48
CDK9-205ENST00000498339 A8MUU9 505 aa5.8□□□□□ -1.48
CDK9-205ENST00000498339 SVBPQ8N300 66 aa5.8□□□□□ -1.48
CDK9-205ENST00000498339 COPS9Q8WXC6 57 aa5.8□□□□□ -1.48
CDK9-205ENST00000498339 TTTY13Q9BZ97 58 aa5.8□□□□□ -1.48
CDK9-205ENST00000498339 KRTAP6-3Q3LI67 103 aa5.79□□□□□ -1.48
CDK9-205ENST00000498339 SCGB1D4Q6XE38 83 aa5.79□□□□□ -1.48
CDK9-205ENST00000498339 TRGC2P03986 189 aa5.78□□□□□ -1.48
CDK9-205ENST00000498339 YPEL4Q96NS1 127 aa5.78□□□□□ -1.48
CDK9-205ENST00000498339 Q6ZQY7 126 aa5.77□□□□□ -1.49
CDK9-205ENST00000498339 SMIM11BQ8TCY0 68 aa5.77□□□□□ -1.49
CDK9-205ENST00000498339 SS18L2Q9UHA2 77 aa5.76□□□□□ -1.49
CDK9-205ENST00000498339 VAMP3Q15836 100 aa5.75□□□□□ -1.49
CDK9-205ENST00000498339 OCIAD2Q56VL3 154 aa5.75□□□□□ -1.49
CDK9-205ENST00000498339 NEBP20929 6669 aa5.74□□□□□ -1.49
CDK9-205ENST00000498339 IFITM1P13164 125 aa5.74□□□□□ -1.49
CDK9-205ENST00000498339 DSCR10P59022 87 aa5.74□□□□□ -1.49
CDK9-205ENST00000498339 hADV29S1A0JD25 119 aa5.73□□□□□ -1.49
CDK9-205ENST00000498339 SYS1-DBNDD2H3BUS1 97 aa5.73□□□□□ -1.49
CDK9-205ENST00000498339 H3BUT2 72 aa5.73□□□□□ -1.49
CDK9-205ENST00000498339 LINC00575Q6W349 94 aa5.72□□□□□ -1.49
CDK9-205ENST00000498339 MUSTN1Q8IVN3 82 aa5.72□□□□□ -1.49
CDK9-205ENST00000498339 SNHG12Q9BXW3 62 aa5.72□□□□□ -1.49
CDK9-205ENST00000498339 MUC12Q9UKN1 5478 aa5.72□□□□□ -1.49
CDK9-205ENST00000498339 HRES1P13985 223 aa5.71□□□□□ -1.5
CDK9-205ENST00000498339 SIGMAR1Q99720 223 aa5.71□□□□□ -1.5
CDK9-205ENST00000498339 KRTAP16-1A8MUX0 517 aa5.7□□□□□ -1.5
CDK9-205ENST00000498339 MTURNQ8N3F0 131 aa5.7□□□□□ -1.5
CDK9-205ENST00000498339 SCGB1D1O95968 90 aa5.69□□□□□ -1.5
CDK9-205ENST00000498339 ANKRD39Q53RE8 183 aa5.69□□□□□ -1.5
CDK9-205ENST00000498339 LINC01545Q5VT33 79 aa5.69□□□□□ -1.5
CDK9-205ENST00000498339 Q6ZVH6 145 aa5.69□□□□□ -1.5
CDK9-205ENST00000498339 MPLKIPQ8TAP9 179 aa5.69□□□□□ -1.5
CDK9-205ENST00000498339 A0A087WSZ3 146 aa5.67□□□□□ -1.5
CDK9-205ENST00000498339 PET117Q6UWS5 81 aa5.67□□□□□ -1.5
CDK9-205ENST00000498339 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.67□□□□□ -1.5
CDK9-205ENST00000498339 Q8N9P0 234 aaPredicted RBP5.66□□□□□ -1.5
CDK9-205ENST00000498339 PPDPFLQ8WWR9 84 aa5.66□□□□□ -1.5
CDK9-205ENST00000498339 LINC00313P59037 77 aa5.65□□□□□ -1.5
CDK9-205ENST00000498339 NOTCH2NLQ7Z3S9 236 aa5.64□□□□□ -1.51
CDK9-205ENST00000498339 TEN1Q86WV5 123 aa5.64□□□□□ -1.51
CDK9-205ENST00000498339 COLCA2A8K830 154 aa5.63□□□□□ -1.51
CDK9-205ENST00000498339 A8MWP4 228 aa5.63□□□□□ -1.51
CDK9-205ENST00000498339 C3orf79P0CE67 100 aa5.61□□□□□ -1.51
CDK9-205ENST00000498339 KRTDAPP60985 99 aa5.61□□□□□ -1.51
CDK9-205ENST00000498339 KRTAP20-1Q3LI63 56 aa5.61□□□□□ -1.51
CDK9-205ENST00000498339 C12orf57Q99622 126 aa5.61□□□□□ -1.51
CDK9-205ENST00000498339 IGKV4-1P06312 121 aa5.6□□□□□ -1.51
CDK9-205ENST00000498339 BVES-AS1Q5T3Y7 98 aa5.59□□□□□ -1.51
CDK9-205ENST00000498339 ATOH7Q8N100 152 aa5.59□□□□□ -1.51
CDK9-205ENST00000498339 NDUFV3P56181 108 aaKnown RBP5.57□□□□□ -1.52
CDK9-205ENST00000498339 IGHV6-1A0A0B4J1U7 121 aa5.55□□□□□ -1.52
CDK9-205ENST00000498339 SNCGO76070 127 aa5.55□□□□□ -1.52
CDK9-205ENST00000498339 H3BMG7 143 aa5.54□□□□□ -1.52
CDK9-205ENST00000498339 HIST1H2BKO60814 126 aa5.54□□□□□ -1.52
CDK9-205ENST00000498339 HIST1H2BJP06899 126 aa5.54□□□□□ -1.52
CDK9-205ENST00000498339 HIST1H2BOP23527 126 aa5.54□□□□□ -1.52
CDK9-205ENST00000498339 HIST1H2BBP33778 126 aa5.54□□□□□ -1.52
CDK9-205ENST00000498339 HIST1H2BDP58876 126 aa5.54□□□□□ -1.52
CDK9-205ENST00000498339 HIST1H2BCP62807 126 aa5.54□□□□□ -1.52
CDK9-205ENST00000498339 HIST2H2BEQ16778 126 aa5.54□□□□□ -1.52
CDK9-205ENST00000498339 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.54□□□□□ -1.52
CDK9-205ENST00000498339 HIST1H2BHQ93079 126 aa5.54□□□□□ -1.52
CDK9-205ENST00000498339 HIST1H2BNQ99877 126 aa5.54□□□□□ -1.52
CDK9-205ENST00000498339 HIST1H2BMQ99879 126 aa5.54□□□□□ -1.52
CDK9-205ENST00000498339 SPINK7P58062 85 aa5.53□□□□□ -1.52
CDK9-205ENST00000498339 DEFB116Q30KQ4 102 aa5.53□□□□□ -1.52
CDK9-205ENST00000498339 FABP2P12104 132 aa5.51□□□□□ -1.53
CDK9-205ENST00000498339 WFDC13Q8IUB5 93 aa5.51□□□□□ -1.53
CDK9-205ENST00000498339 A0A1W2PNM2 257 aa5.5□□□□□ -1.53
CDK9-205ENST00000498339 GHRHP01286 108 aa5.5□□□□□ -1.53
CDK9-205ENST00000498339 ZCCHC13Q8WW36 166 aaKnown RBP5.5□□□□□ -1.53
CDK9-205ENST00000498339 A0A1B0GV72 72 aa5.49□□□□□ -1.53
CDK9-205ENST00000498339 MDN1Q9NU22 5596 aa5.49□□□□□ -1.53
CDK9-205ENST00000498339 A6NN06 94 aa5.48□□□□□ -1.53
CDK9-205ENST00000498339 C8orf87E5RJ46 101 aa5.46□□□□□ -1.54
CDK9-205ENST00000498339 SNRPEP62304 92 aaKnown RBP5.46□□□□□ -1.54
CDK9-205ENST00000498339 HIST1H4GQ99525 98 aa5.46□□□□□ -1.54
CDK9-205ENST00000498339 TRBV7-4A0A0J9YYF1 115 aa5.45□□□□□ -1.54
CDK9-205ENST00000498339 ANKRD29Q8N6D5 301 aa5.45□□□□□ -1.54
CDK9-205ENST00000498339 FAM218AQ96MZ4 157 aa5.45□□□□□ -1.54
CDK9-205ENST00000498339 A0A1B0GVX0 72 aa5.44□□□□□ -1.54
CDK9-205ENST00000498339 HSBP1L1C9JCN9 74 aa5.44□□□□□ -1.54
CDK9-205ENST00000498339 H0YGX0 51 aa5.44□□□□□ -1.54
CDK9-205ENST00000498339 LYRM7Q5U5X0 104 aa5.44□□□□□ -1.54
CDK9-205ENST00000498339 RAB37Q96AX2 223 aa5.44□□□□□ -1.54
CDK9-205ENST00000498339 TRACP01848 142 aa5.43□□□□□ -1.54
CDK9-205ENST00000498339 LINC00472Q9H8W2 130 aa5.43□□□□□ -1.54
CDK9-205ENST00000498339 CCKP06307 115 aa5.4□□□□□ -1.54
CDK9-205ENST00000498339 KMT2DO14686 5537 aa5.4□□□□□ -1.55
CDK9-205ENST00000498339 COA6Q5JTJ3 125 aaKnown RBP5.39□□□□□ -1.55
CDK9-205ENST00000498339 VPS25Q9BRG1 176 aa5.38□□□□□ -1.55
CDK9-205ENST00000498339 A0A1B0GX51 115 aa5.37□□□□□ -1.55
CDK9-205ENST00000498339 DNAL4O96015 105 aa5.37□□□□□ -1.55
CDK9-205ENST00000498339 H1FX-AS1Q4G0G2 97 aa5.37□□□□□ -1.55
CDK9-205ENST00000498339 DSCR8Q96T75 97 aa5.36□□□□□ -1.55
CDK9-205ENST00000498339 ORMDL1Q9P0S3 153 aa5.35□□□□□ -1.55
CDK9-205ENST00000498339 A0A0B4J2C4 111 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms