RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 Q6ZRP5 223 aa3.41□□□□□ -1.86
HMGXB4-208ENST00000498325 SMIM20Q8N5G0 67 aa3.41□□□□□ -1.86
HMGXB4-208ENST00000498325 C3orf22Q8N5N4 141 aa3.41□□□□□ -1.86
HMGXB4-208ENST00000498325 SMIM11BQ8TCY0 68 aa3.41□□□□□ -1.86
HMGXB4-208ENST00000498325 FAT4Q6V0I7 4981 aa3.41□□□□□ -1.86
HMGXB4-208ENST00000498325 LRCOL1A6NCL2 159 aa3.4□□□□□ -1.87
HMGXB4-208ENST00000498325 ATOX1O00244 68 aa3.4□□□□□ -1.87
HMGXB4-208ENST00000498325 VPREB1P12018 145 aa3.4□□□□□ -1.87
HMGXB4-208ENST00000498325 RPS28P62857 69 aaKnown RBP3.4□□□□□ -1.87
HMGXB4-208ENST00000498325 PRR3P79522 188 aaKnown RBP3.4□□□□□ -1.87
HMGXB4-208ENST00000498325 C1orf134Q5TEV5 83 aa3.4□□□□□ -1.87
HMGXB4-208ENST00000498325 Q6ZRN7 208 aaPredicted RBP3.4□□□□□ -1.87
HMGXB4-208ENST00000498325 NKAPP1Q8N9T2 125 aa3.4□□□□□ -1.87
HMGXB4-208ENST00000498325 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.39□□□□□ -1.87
HMGXB4-208ENST00000498325 FAM236AA0A1B0GUQ0 79 aa3.39□□□□□ -1.87
HMGXB4-208ENST00000498325 FAM236BA0A1B0GV22 79 aa3.39□□□□□ -1.87
HMGXB4-208ENST00000498325 IGLV6-57P01721 117 aa3.39□□□□□ -1.87
HMGXB4-208ENST00000498325 BAALC-AS2P0C853 105 aa3.39□□□□□ -1.87
HMGXB4-208ENST00000498325 C9orf153Q5TBE3 101 aa3.39□□□□□ -1.87
HMGXB4-208ENST00000498325 C9orf163Q8N9P6 203 aa3.39□□□□□ -1.87
HMGXB4-208ENST00000498325 CLEC2BQ92478 149 aa3.39□□□□□ -1.87
HMGXB4-208ENST00000498325 VPS13BQ7Z7G8 4022 aa3.39□□□□□ -1.87
HMGXB4-208ENST00000498325 IGLV5-37A0A075B6J1 123 aa3.38□□□□□ -1.87
HMGXB4-208ENST00000498325 TRAV23DV6A0A075B6W5 121 aa3.38□□□□□ -1.87
HMGXB4-208ENST00000498325 A0A087WTM6 91 aa3.38□□□□□ -1.87
HMGXB4-208ENST00000498325 TRBV10-3A0A0K0K1G6 114 aa3.38□□□□□ -1.87
HMGXB4-208ENST00000498325 J3KT08 172 aa3.38□□□□□ -1.87
HMGXB4-208ENST00000498325 DNAL4O96015 105 aa3.38□□□□□ -1.87
HMGXB4-208ENST00000498325 CRYGAP11844 174 aa3.38□□□□□ -1.87
HMGXB4-208ENST00000498325 COX7CP15954 63 aa3.38□□□□□ -1.87
HMGXB4-208ENST00000498325 HIST1H4AP62805 103 aaKnown RBP3.38□□□□□ -1.87
HMGXB4-208ENST00000498325 C6orf99Q4VX62 202 aa3.38□□□□□ -1.87
HMGXB4-208ENST00000498325 C9orf129Q5T035 196 aaKnown RBP3.38□□□□□ -1.87
HMGXB4-208ENST00000498325 Q8N814 137 aa3.38□□□□□ -1.87
HMGXB4-208ENST00000498325 Q8NDZ9 215 aa3.38□□□□□ -1.87
HMGXB4-208ENST00000498325 LINC00474Q9P2X8 69 aa3.38□□□□□ -1.87
HMGXB4-208ENST00000498325 TRBV7-6A0A0J9YX20 115 aa3.37□□□□□ -1.87
HMGXB4-208ENST00000498325 ATP5EP2Q5VTU8 51 aa3.37□□□□□ -1.87
HMGXB4-208ENST00000498325 Q6JHZ5 121 aa3.37□□□□□ -1.87
HMGXB4-208ENST00000498325 DIRC1Q969H9 104 aa3.37□□□□□ -1.87
HMGXB4-208ENST00000498325 FLG2Q5D862 2391 aaPredicted RBP3.37□□□□□ -1.87
HMGXB4-208ENST00000498325 IGKV2-24A0A0C4DH68 120 aa3.36□□□□□ -1.87
HMGXB4-208ENST00000498325 H3BQ85 93 aa3.36□□□□□ -1.87
HMGXB4-208ENST00000498325 ZNF73O43830 326 aaPredicted RBP3.36□□□□□ -1.87
HMGXB4-208ENST00000498325 COX7BP24311 80 aa3.36□□□□□ -1.87
HMGXB4-208ENST00000498325 TMEM258P61165 79 aa3.36□□□□□ -1.87
HMGXB4-208ENST00000498325 GAGE2AQ6NT46 116 aa3.36□□□□□ -1.87
HMGXB4-208ENST00000498325 C7orf33Q8WU49 177 aa3.36□□□□□ -1.87
HMGXB4-208ENST00000498325 DPH3Q96FX2 82 aa3.36□□□□□ -1.87
HMGXB4-208ENST00000498325 OBSCN-AS1Q96MR7 158 aa3.36□□□□□ -1.87
HMGXB4-208ENST00000498325 C22orf24Q9Y442 160 aa3.36□□□□□ -1.87
HMGXB4-208ENST00000498325 IGLV1-50A0A075B6I6 118 aa3.35□□□□□ -1.87
HMGXB4-208ENST00000498325 A0A096LNI7 61 aa3.35□□□□□ -1.87
HMGXB4-208ENST00000498325 hADV29S1A0JD25 119 aa3.35□□□□□ -1.87
HMGXB4-208ENST00000498325 BCE1O60756 84 aa3.35□□□□□ -1.87
HMGXB4-208ENST00000498325 C5orf47Q569G3 176 aa3.35□□□□□ -1.87
HMGXB4-208ENST00000498325 Q5VSD8 79 aa3.35□□□□□ -1.87
HMGXB4-208ENST00000498325 LINC00575Q6W349 94 aa3.35□□□□□ -1.87
HMGXB4-208ENST00000498325 FAM19A5Q7Z5A7 132 aaPredicted RBP3.35□□□□□ -1.87
HMGXB4-208ENST00000498325 MRPL55Q7Z7F7 128 aaKnown RBP3.35□□□□□ -1.87
HMGXB4-208ENST00000498325 SERP2Q8N6R1 65 aa3.35□□□□□ -1.87
HMGXB4-208ENST00000498325 LINC00167Q96N53 147 aa3.35□□□□□ -1.87
HMGXB4-208ENST00000498325 KCNQ1DNQ9H478 68 aa3.35□□□□□ -1.87
HMGXB4-208ENST00000498325 LRP2P98164 4655 aa3.35□□□□□ -1.87
HMGXB4-208ENST00000498325 FSIP2Q5CZC0 6907 aa3.35□□□□□ -1.87
HMGXB4-208ENST00000498325 IGLV5-52A0A0A0MRZ9 124 aa3.34□□□□□ -1.87
HMGXB4-208ENST00000498325 ETDCA0A1B0GVM5 59 aa3.34□□□□□ -1.87
HMGXB4-208ENST00000498325 FAM168BA1KXE4 195 aa3.34□□□□□ -1.87
HMGXB4-208ENST00000498325 ELOF1P60002 83 aaKnown RBP3.34□□□□□ -1.87
HMGXB4-208ENST00000498325 SMCR5Q8TEV8 140 aa3.34□□□□□ -1.87
HMGXB4-208ENST00000498325 FAM218AQ96MZ4 157 aa3.34□□□□□ -1.87
HMGXB4-208ENST00000498325 ORMDL1Q9P0S3 153 aa3.34□□□□□ -1.87
HMGXB4-208ENST00000498325 A0A1W2PNN7 141 aa3.33□□□□□ -1.88
HMGXB4-208ENST00000498325 RPL37AP8A6NKH3 93 aa3.33□□□□□ -1.88
HMGXB4-208ENST00000498325 JMJD7-PLA2G4BH0Y9G9 81 aa3.33□□□□□ -1.88
HMGXB4-208ENST00000498325 TMEM256-PLSCR3K7ERE1 68 aa3.33□□□□□ -1.88
HMGXB4-208ENST00000498325 SEC61BP60468 96 aaKnown RBP3.33□□□□□ -1.88
HMGXB4-208ENST00000498325 SPRR1AP35321 89 aa3.32□□□□□ -1.88
HMGXB4-208ENST00000498325 UBE2BP63146 152 aa3.32□□□□□ -1.88
HMGXB4-208ENST00000498325 REG3GQ6UW15 175 aa3.32□□□□□ -1.88
HMGXB4-208ENST00000498325 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.32□□□□□ -1.88
HMGXB4-208ENST00000498325 KRTAP7-1Q8IUC3 87 aa3.32□□□□□ -1.88
HMGXB4-208ENST00000498325 DHRS4-AS1Q9P1J3 65 aa3.32□□□□□ -1.88
HMGXB4-208ENST00000498325 LRP1Q07954 4544 aaKnown RBP3.31□□□□□ -1.88
HMGXB4-208ENST00000498325 CCKP06307 115 aa3.31□□□□□ -1.88
HMGXB4-208ENST00000498325 CHTF8P0CG12 524 aa3.31□□□□□ -1.88
HMGXB4-208ENST00000498325 SPACA4Q8TDM5 124 aa3.31□□□□□ -1.88
HMGXB4-208ENST00000498325 KRTAP4-16G5E9R7 235 aaPredicted RBP3.3□□□□□ -1.88
HMGXB4-208ENST00000498325 Q6ZQY7 126 aa3.3□□□□□ -1.88
HMGXB4-208ENST00000498325 Q6ZRX8 168 aa3.3□□□□□ -1.88
HMGXB4-208ENST00000498325 PHF5AQ7RTV0 110 aaKnown RBP3.3□□□□□ -1.88
HMGXB4-208ENST00000498325 FAM19A1Q7Z5A9 133 aa3.3□□□□□ -1.88
HMGXB4-208ENST00000498325 PDE6GP18545 87 aa3.29□□□□□ -1.88
HMGXB4-208ENST00000498325 UBL5Q9BZL1 73 aa3.29□□□□□ -1.88
HMGXB4-208ENST00000498325 C14orf132Q9NPU4 83 aa3.29□□□□□ -1.88
HMGXB4-208ENST00000498325 LINC00846Q9NV44 126 aa3.29□□□□□ -1.88
HMGXB4-208ENST00000498325 PLAC8Q9NZF1 115 aa3.29□□□□□ -1.88
HMGXB4-208ENST00000498325 LAMTOR3Q9UHA4 124 aa3.29□□□□□ -1.88
HMGXB4-208ENST00000498325 H0Y9J4 135 aa3.28□□□□□ -1.88
HMGXB4-208ENST00000498325 PANO1I0J062 215 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms