RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 VPS13BQ7Z7G8 4022 aa0.79□□□□□ -2.28
XRN1-214ENST00000498077 NDUFC1O43677 76 aa0.79□□□□□ -2.28
XRN1-214ENST00000498077 KRTAP13-2Q52LG2 175 aa0.79□□□□□ -2.28
XRN1-214ENST00000498077 ATRAIDQ6UW56 229 aa0.79□□□□□ -2.28
XRN1-214ENST00000498077 LEAP2Q969E1 77 aa0.79□□□□□ -2.28
XRN1-214ENST00000498077 Q96NJ1 140 aa0.79□□□□□ -2.28
XRN1-214ENST00000498077 IGHV3OR16-9A0A0B4J2B5 98 aa0.79□□□□□ -2.28
XRN1-214ENST00000498077 STATHP02808 62 aa0.79□□□□□ -2.28
XRN1-214ENST00000498077 ADCYAP1P18509 176 aa0.79□□□□□ -2.28
XRN1-214ENST00000498077 IGHV3-16A0A0C4DH30 117 aa0.78□□□□□ -2.28
XRN1-214ENST00000498077 C5orf38Q86SI9 138 aa0.78□□□□□ -2.28
XRN1-214ENST00000498077 CBLN2Q8IUK8 224 aa0.78□□□□□ -2.28
XRN1-214ENST00000498077 C1QBP02746 253 aa0.78□□□□□ -2.28
XRN1-214ENST00000498077 LY6LH3BQJ8 138 aa0.78□□□□□ -2.28
XRN1-214ENST00000498077 KRTAP10-8P60410 259 aa0.78□□□□□ -2.28
XRN1-214ENST00000498077 GNG3P63215 75 aa0.78□□□□□ -2.28
XRN1-214ENST00000498077 LINC00575Q6W349 94 aa0.78□□□□□ -2.28
XRN1-214ENST00000498077 SYS1Q8N2H4 156 aa0.78□□□□□ -2.28
XRN1-214ENST00000498077 GYPBP06028 91 aa0.78□□□□□ -2.28
XRN1-214ENST00000498077 FAM201AQ5SY85 155 aa0.78□□□□□ -2.28
XRN1-214ENST00000498077 EML6Q6ZMW3 1958 aa0.78□□□□□ -2.29
XRN1-214ENST00000498077 LAMA1P25391 3075 aa0.78□□□□□ -2.29
XRN1-214ENST00000498077 TRAV4A0A0B4J268 109 aa0.78□□□□□ -2.29
XRN1-214ENST00000498077 IGLC7A0M8Q6 106 aa0.78□□□□□ -2.29
XRN1-214ENST00000498077 H3BUT2 72 aa0.78□□□□□ -2.29
XRN1-214ENST00000498077 SPRR1AP35321 89 aa0.78□□□□□ -2.29
XRN1-214ENST00000498077 SPINK13Q1W4C9 94 aa0.78□□□□□ -2.29
XRN1-214ENST00000498077 SMIM11BQ8TCY0 68 aa0.78□□□□□ -2.29
XRN1-214ENST00000498077 TNRC6AQ8NDV7 1962 aaKnown RBP0.77□□□□□ -2.29
XRN1-214ENST00000498077 P0C879 139 aa0.77□□□□□ -2.29
XRN1-214ENST00000498077 CLDN19Q8N6F1 224 aa0.77□□□□□ -2.29
XRN1-214ENST00000498077 FSIP2Q5CZC0 6907 aa0.77□□□□□ -2.29
XRN1-214ENST00000498077 BAZ2AQ9UIF9 1905 aaKnown RBP0.77□□□□□ -2.29
XRN1-214ENST00000498077 A0A096LNT2 108 aa0.77□□□□□ -2.29
XRN1-214ENST00000498077 IGHV3-20A0A0C4DH32 117 aa0.77□□□□□ -2.29
XRN1-214ENST00000498077 M0QZ58 72 aa0.77□□□□□ -2.29
XRN1-214ENST00000498077 HMGN4O00479 90 aa0.77□□□□□ -2.29
XRN1-214ENST00000498077 CORTO00230 105 aa0.77□□□□□ -2.29
XRN1-214ENST00000498077 KRTAP10-5P60370 271 aa0.77□□□□□ -2.29
XRN1-214ENST00000498077 KRTAP26-1Q6PEX3 210 aa0.77□□□□□ -2.29
XRN1-214ENST00000498077 S4R3C0 116 aa0.77□□□□□ -2.29
XRN1-214ENST00000498077 MCM3APO60318 1980 aa0.77□□□□□ -2.29
XRN1-214ENST00000498077 A0A1B0GV90 55 aa0.77□□□□□ -2.29
XRN1-214ENST00000498077 LRP2P98164 4655 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 NUP210LQ5VU65 1888 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 TRAV26-1A0A087WT03 109 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 IGHV3-23P01764 117 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 ODF3BA8MYP8 253 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 LCE3CQ5T5A8 94 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 TOMM6Q96B49 74 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 TMEM56-RWDD3S4R434 201 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 KRTAP10-1P60331 282 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 NMSQ5H8A3 153 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 CLLU1OSQ5K130 101 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 LCE3AQ5TA76 89 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 FNDC9Q8TBE3 224 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 CHCHD7Q9BUK0 85 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 LINC00959A0A1B0GUT2 108 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 NDUFA4O00483 81 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 DEFB133Q30KQ1 61 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 CCL17Q92583 94 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 CCL13Q99616 98 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 C6orf48Q9UBA6 75 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 HIGD1AQ9Y241 93 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 COL7A1Q02388 2944 aa0.76□□□□□ -2.29
XRN1-214ENST00000498077 RAI1Q7Z5J4 1906 aaPredicted RBP0.76□□□□□ -2.29
XRN1-214ENST00000498077 CCL22O00626 93 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 MS4A6EQ96DS6 147 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 SPRR4Q96PI1 79 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 CACFD1Q9UGQ2 172 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 KANTRA0A1W2PQU2 76 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 E5RI56 91 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 M0R1W7 72 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 MRPL33O75394 65 aaKnown RBP0.75□□□□□ -2.29
XRN1-214ENST00000498077 CRYBA2P53672 197 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 Q0VG73 95 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 ENHOQ6UWT2 76 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 SMPXQ9UHP9 88 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 DNAH10Q8IVF4 4471 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 ATP5G1P05496 136 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 IGLC2P0DOY2 106 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 IGLC3P0DOY3 106 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 LINC01556Q5JQF7 62 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 C1orf137Q5JT78 98 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 NCMAPQ5T1S8 102 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 UMAD1C9J7I0 102 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 F8W036 122 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 SMDT1Q9H4I9 107 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 MED9Q9NWA0 146 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 DOCK5Q9H7D0 1870 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 NDUFB2O95178 105 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 CCL3P10147 92 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 ASB16-AS1Q495Z4 193 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 LYPD2Q6UXB3 125 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 LINC01555Q8NAE3 123 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 KRTAP4-3Q9BYR4 195 aa0.75□□□□□ -2.29
XRN1-214ENST00000498077 LSM2Q9Y333 95 aaKnown RBP0.75□□□□□ -2.29
XRN1-214ENST00000498077 HMGN1P05114 100 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 CCL7P80098 99 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 C4orf26Q17RF5 130 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms