RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 LAMTOR3Q9UHA4 124 aa10.61□□□□□ -0.71
LMNA-216ENST00000496738 BCE1O60756 84 aa10.6□□□□□ -0.71
LMNA-216ENST00000496738 UBE2BP63146 152 aa10.6□□□□□ -0.71
LMNA-216ENST00000496738 DNAH11Q96DT5 4516 aa10.6□□□□□ -0.71
LMNA-216ENST00000496738 KRTAP10-1P60331 282 aa10.6□□□□□ -0.71
LMNA-216ENST00000496738 FAM30AQ9NZY2 134 aa10.6□□□□□ -0.71
LMNA-216ENST00000496738 ATP5EP2Q5VTU8 51 aa10.59□□□□□ -0.71
LMNA-216ENST00000496738 OBSCN-AS1Q96MR7 158 aa10.59□□□□□ -0.71
LMNA-216ENST00000496738 TRAV7A0A075B6U4 112 aa10.58□□□□□ -0.72
LMNA-216ENST00000496738 PRYO14603 147 aa10.58□□□□□ -0.72
LMNA-216ENST00000496738 COX7BP24311 80 aa10.58□□□□□ -0.72
LMNA-216ENST00000496738 HAMPP81172 84 aa10.58□□□□□ -0.72
LMNA-216ENST00000496738 PKD1P98161 4303 aa10.57□□□□□ -0.72
LMNA-216ENST00000496738 F8WEM9 126 aa10.56□□□□□ -0.72
LMNA-216ENST00000496738 ELOF1P60002 83 aaKnown RBP10.56□□□□□ -0.72
LMNA-216ENST00000496738 REG3GQ6UW15 175 aa10.56□□□□□ -0.72
LMNA-216ENST00000496738 C14orf132Q9NPU4 83 aa10.56□□□□□ -0.72
LMNA-216ENST00000496738 NDUFC1O43677 76 aa10.56□□□□□ -0.72
LMNA-216ENST00000496738 LINC00575Q6W349 94 aa10.55□□□□□ -0.72
LMNA-216ENST00000496738 PLAC8Q9NZF1 115 aa10.55□□□□□ -0.72
LMNA-216ENST00000496738 DNAH5Q8TE73 4624 aa10.54□□□□□ -0.72
LMNA-216ENST00000496738 ETDCA0A1B0GVM5 59 aa10.54□□□□□ -0.72
LMNA-216ENST00000496738 A0A1B0GVY2 172 aa10.53□□□□□ -0.72
LMNA-216ENST00000496738 SPRR1AP35321 89 aa10.53□□□□□ -0.72
LMNA-216ENST00000496738 KRTAP4-16G5E9R7 235 aaPredicted RBP10.53□□□□□ -0.72
LMNA-216ENST00000496738 LINC00528Q8N1L1 170 aa10.53□□□□□ -0.72
LMNA-216ENST00000496738 MPLKIPQ8TAP9 179 aa10.53□□□□□ -0.72
LMNA-216ENST00000496738 CIRBP-AS1Q8TBR5 109 aa10.52□□□□□ -0.73
LMNA-216ENST00000496738 FAM229BQ4G0N7 80 aa10.51□□□□□ -0.73
LMNA-216ENST00000496738 PRLHP81277 87 aa10.5□□□□□ -0.73
LMNA-216ENST00000496738 Q6ZRX8 168 aa10.5□□□□□ -0.73
LMNA-216ENST00000496738 SCXQ7RTU7 201 aa10.5□□□□□ -0.73
LMNA-216ENST00000496738 SNURFQ9Y675 71 aa10.5□□□□□ -0.73
LMNA-216ENST00000496738 Q6ZSA8 131 aa10.49□□□□□ -0.73
LMNA-216ENST00000496738 ORMDL1Q9P0S3 153 aa10.49□□□□□ -0.73
LMNA-216ENST00000496738 RYR3Q15413 4870 aa10.49□□□□□ -0.73
LMNA-216ENST00000496738 Q9BRP9 147 aa10.48□□□□□ -0.73
LMNA-216ENST00000496738 Q6ZQY7 126 aa10.47□□□□□ -0.73
LMNA-216ENST00000496738 PSORS1C2Q9UIG4 136 aa10.44□□□□□ -0.74
LMNA-216ENST00000496738 ERC2-IT1O76042 136 aa10.44□□□□□ -0.74
LMNA-216ENST00000496738 UBE2AP49459 152 aa10.43□□□□□ -0.74
LMNA-216ENST00000496738 HIGD2AQ9BW72 106 aa10.43□□□□□ -0.74
LMNA-216ENST00000496738 DHRS4-AS1Q9P1J3 65 aa10.42□□□□□ -0.74
LMNA-216ENST00000496738 C1orf137Q5JT78 98 aa10.41□□□□□ -0.74
LMNA-216ENST00000496738 DNAH8Q96JB1 4490 aa10.41□□□□□ -0.74
LMNA-216ENST00000496738 PKHD1P08F94 4074 aa10.41□□□□□ -0.74
LMNA-216ENST00000496738 ST20-AS1Q8NBB2 130 aa10.41□□□□□ -0.74
LMNA-216ENST00000496738 DEFB105AQ8NG35 78 aa10.41□□□□□ -0.74
LMNA-216ENST00000496738 RBM12B-AS1Q9P1G2 102 aa10.41□□□□□ -0.74
LMNA-216ENST00000496738 TMEM256-PLSCR3K7ERE1 68 aa10.4□□□□□ -0.74
LMNA-216ENST00000496738 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.39□□□□□ -0.75
LMNA-216ENST00000496738 TRBV7-4A0A0J9YYF1 115 aa10.37□□□□□ -0.75
LMNA-216ENST00000496738 KRTAP13-1Q8IUC0 172 aa10.35□□□□□ -0.75
LMNA-216ENST00000496738 UBL5Q9BZL1 73 aa10.35□□□□□ -0.75
LMNA-216ENST00000496738 H0Y9J4 135 aa10.34□□□□□ -0.75
LMNA-216ENST00000496738 Q1T7F1 81 aa10.34□□□□□ -0.75
LMNA-216ENST00000496738 KTN1-AS1Q86SY8 53 aa10.34□□□□□ -0.75
LMNA-216ENST00000496738 DYNC1H1Q14204 4646 aaKnown RBP10.33□□□□□ -0.76
LMNA-216ENST00000496738 LINC01547P58512 204 aaPredicted RBP10.33□□□□□ -0.76
LMNA-216ENST00000496738 JMJD7-PLA2G4BH0Y9G9 81 aa10.32□□□□□ -0.76
LMNA-216ENST00000496738 Q8N377 158 aa10.32□□□□□ -0.76
LMNA-216ENST00000496738 LRP1BQ9NZR2 4599 aa10.31□□□□□ -0.76
LMNA-216ENST00000496738 H3BQ85 93 aa10.3□□□□□ -0.76
LMNA-216ENST00000496738 SMR3BP02814 79 aaPredicted RBP10.3□□□□□ -0.76
LMNA-216ENST00000496738 IGLV7-43P04211 117 aa10.3□□□□□ -0.76
LMNA-216ENST00000496738 TMEM254Q8TBM7 123 aa10.28□□□□□ -0.76
LMNA-216ENST00000496738 IGLV5-48A0A075B6I7 105 aa10.28□□□□□ -0.76
LMNA-216ENST00000496738 ZNF861PO60384 105 aa10.28□□□□□ -0.76
LMNA-216ENST00000496738 SRRM2Q9UQ35 2752 aaKnown RBP10.28□□□□□ -0.76
LMNA-216ENST00000496738 hDV103S1A0JD37 113 aa10.23□□□□□ -0.77
LMNA-216ENST00000496738 SMIM29Q86T20 159 aa10.22□□□□□ -0.77
LMNA-216ENST00000496738 NREPQ16612 68 aa10.21□□□□□ -0.77
LMNA-216ENST00000496738 SPRR4Q96PI1 79 aa10.21□□□□□ -0.77
LMNA-216ENST00000496738 RPL37AP61513 92 aaKnown RBP10.21□□□□□ -0.78
LMNA-216ENST00000496738 CXCL6P80162 114 aa10.21□□□□□ -0.78
LMNA-216ENST00000496738 ANAPC11Q9NYG5 84 aa10.21□□□□□ -0.78
LMNA-216ENST00000496738 H3BS24 57 aa10.19□□□□□ -0.78
LMNA-216ENST00000496738 Q6ZQT0 140 aa10.19□□□□□ -0.78
LMNA-216ENST00000496738 Q6ZVQ6 151 aa10.19□□□□□ -0.78
LMNA-216ENST00000496738 LOC110117498A0A087WWA1 95 aa10.18□□□□□ -0.78
LMNA-216ENST00000496738 APOBP04114 4563 aaKnown RBP10.18□□□□□ -0.78
LMNA-216ENST00000496738 TRAV22A0A0B4J277 110 aa10.16□□□□□ -0.78
LMNA-216ENST00000496738 PSPHP1O15172 72 aa10.16□□□□□ -0.78
LMNA-216ENST00000496738 NDUFS5O43920 106 aa10.16□□□□□ -0.78
LMNA-216ENST00000496738 SPRR1BP22528 89 aa10.16□□□□□ -0.78
LMNA-216ENST00000496738 ZNF706Q9Y5V0 76 aaPredicted RBP10.16□□□□□ -0.78
LMNA-216ENST00000496738 A0A0G2JQZ4 141 aa10.15□□□□□ -0.78
LMNA-216ENST00000496738 C8orf87E5RJ46 101 aa10.14□□□□□ -0.79
LMNA-216ENST00000496738 EPPK1P58107 5090 aaKnown RBP10.14□□□□□ -0.79
LMNA-216ENST00000496738 IGLV9-49A0A0B4J1Y8 123 aa10.14□□□□□ -0.79
LMNA-216ENST00000496738 PDE6GP18545 87 aa10.14□□□□□ -0.79
LMNA-216ENST00000496738 LINC00483Q53H64 154 aa10.13□□□□□ -0.79
LMNA-216ENST00000496738 A8MU10 97 aa10.12□□□□□ -0.79
LMNA-216ENST00000496738 BPY2O14599 106 aa10.11□□□□□ -0.79
LMNA-216ENST00000496738 VPS13BQ7Z7G8 4022 aa10.1□□□□□ -0.79
LMNA-216ENST00000496738 CDK2AP2O75956 126 aa10.09□□□□□ -0.79
LMNA-216ENST00000496738 KRTAP10-4P60372 401 aaPredicted RBP10.09□□□□□ -0.79
LMNA-216ENST00000496738 C1orf64Q8NEQ6 169 aa10.08□□□□□ -0.8
LMNA-216ENST00000496738 IGFL1Q6UW32 110 aa10.07□□□□□ -0.8
LMNA-216ENST00000496738 OCR1Q9BZK8 76 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms