RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 PRKDCP78527 4128 aaKnown RBP9.33□□□□□ -0.92
UBXN11-215ENST00000494942 H0Y9J4 135 aa9.32□□□□□ -0.92
UBXN11-215ENST00000494942 UBE2DNLQ8IWF7 75 aa9.32□□□□□ -0.92
UBXN11-215ENST00000494942 UBE2AP49459 152 aa9.32□□□□□ -0.92
UBXN11-215ENST00000494942 HUWE1Q7Z6Z7 4374 aaKnown RBP9.31□□□□□ -0.92
UBXN11-215ENST00000494942 A0A087WSZ3 146 aa9.31□□□□□ -0.92
UBXN11-215ENST00000494942 A0A0G2JQZ4 141 aa9.31□□□□□ -0.92
UBXN11-215ENST00000494942 FBN3Q75N90 2809 aa9.3□□□□□ -0.92
UBXN11-215ENST00000494942 ZCCHC13Q8WW36 166 aaKnown RBP9.3□□□□□ -0.92
UBXN11-215ENST00000494942 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.3□□□□□ -0.92
UBXN11-215ENST00000494942 SPRR1BP22528 89 aa9.3□□□□□ -0.92
UBXN11-215ENST00000494942 LINC00474Q9P2X8 69 aa9.3□□□□□ -0.92
UBXN11-215ENST00000494942 PKIGQ9Y2B9 76 aa9.3□□□□□ -0.92
UBXN11-215ENST00000494942 APLNQ9ULZ1 77 aa9.28□□□□□ -0.92
UBXN11-215ENST00000494942 PHF5AQ7RTV0 110 aaKnown RBP9.27□□□□□ -0.92
UBXN11-215ENST00000494942 DNAH9Q9NYC9 4486 aa9.26□□□□□ -0.93
UBXN11-215ENST00000494942 COL7A1Q02388 2944 aa9.26□□□□□ -0.93
UBXN11-215ENST00000494942 DEFB116Q30KQ4 102 aa9.26□□□□□ -0.93
UBXN11-215ENST00000494942 CHTF8P0CG12 524 aa9.25□□□□□ -0.93
UBXN11-215ENST00000494942 C9orf163Q8N9P6 203 aa9.25□□□□□ -0.93
UBXN11-215ENST00000494942 FAM229BQ4G0N7 80 aa9.25□□□□□ -0.93
UBXN11-215ENST00000494942 KRTAP11-1Q8IUC1 163 aa9.24□□□□□ -0.93
UBXN11-215ENST00000494942 LINC00336Q6ZUF6 198 aa9.23□□□□□ -0.93
UBXN11-215ENST00000494942 B9D2Q9BPU9 175 aa9.23□□□□□ -0.93
UBXN11-215ENST00000494942 NDUFB1O75438 58 aa9.22□□□□□ -0.93
UBXN11-215ENST00000494942 WFDC13Q8IUB5 93 aa9.22□□□□□ -0.93
UBXN11-215ENST00000494942 hDV103S1A0JD37 113 aa9.21□□□□□ -0.93
UBXN11-215ENST00000494942 MP68P56378 58 aa9.21□□□□□ -0.93
UBXN11-215ENST00000494942 PRO0628Q9UI54 55 aa9.21□□□□□ -0.93
UBXN11-215ENST00000494942 LRCOL1A6NCL2 159 aa9.21□□□□□ -0.94
UBXN11-215ENST00000494942 KRTAP29-1A8MX34 341 aaPredicted RBP9.2□□□□□ -0.94
UBXN11-215ENST00000494942 PRR15Q8IV56 129 aa9.2□□□□□ -0.94
UBXN11-215ENST00000494942 RPL37AP61513 92 aaKnown RBP9.19□□□□□ -0.94
UBXN11-215ENST00000494942 A8MWP4 228 aa9.19□□□□□ -0.94
UBXN11-215ENST00000494942 MPLKIPQ8TAP9 179 aa9.19□□□□□ -0.94
UBXN11-215ENST00000494942 LINC00472Q9H8W2 130 aa9.19□□□□□ -0.94
UBXN11-215ENST00000494942 CYP4F30PQ9H0H9 118 aa9.18□□□□□ -0.94
UBXN11-215ENST00000494942 DNAH10Q8IVF4 4471 aa9.18□□□□□ -0.94
UBXN11-215ENST00000494942 CASC2Q6XLA1 102 aa9.17□□□□□ -0.94
UBXN11-215ENST00000494942 C1orf64Q8NEQ6 169 aa9.17□□□□□ -0.94
UBXN11-215ENST00000494942 TGP01266 2768 aa9.17□□□□□ -0.94
UBXN11-215ENST00000494942 NBDYA0A0U1RRE5 68 aa9.17□□□□□ -0.94
UBXN11-215ENST00000494942 H3BPC8 53 aa9.16□□□□□ -0.94
UBXN11-215ENST00000494942 KRTAP13-1Q8IUC0 172 aa9.15□□□□□ -0.94
UBXN11-215ENST00000494942 TRAV22A0A0B4J277 110 aa9.14□□□□□ -0.95
UBXN11-215ENST00000494942 LYSTQ99698 3801 aa9.13□□□□□ -0.95
UBXN11-215ENST00000494942 STAB2Q8WWQ8 2551 aa9.13□□□□□ -0.95
UBXN11-215ENST00000494942 Q6ZRN7 208 aaPredicted RBP9.13□□□□□ -0.95
UBXN11-215ENST00000494942 NUPR2A6NF83 97 aa9.13□□□□□ -0.95
UBXN11-215ENST00000494942 LINC00208Q96KT6 92 aa9.13□□□□□ -0.95
UBXN11-215ENST00000494942 H0Y9P7 68 aa9.11□□□□□ -0.95
UBXN11-215ENST00000494942 PANO1I0J062 215 aa9.1□□□□□ -0.95
UBXN11-215ENST00000494942 Q1T7F1 81 aa9.1□□□□□ -0.95
UBXN11-215ENST00000494942 SPACA4Q8TDM5 124 aa9.09□□□□□ -0.95
UBXN11-215ENST00000494942 SPANXA2-OT1Q8N9U9 137 aa9.09□□□□□ -0.95
UBXN11-215ENST00000494942 DYNC2H1Q8NCM8 4307 aaKnown RBP9.09□□□□□ -0.96
UBXN11-215ENST00000494942 BRK1Q8WUW1 75 aa9.08□□□□□ -0.96
UBXN11-215ENST00000494942 PRR4Q16378 134 aa9.07□□□□□ -0.96
UBXN11-215ENST00000494942 SRRM2Q9UQ35 2752 aaKnown RBP9.06□□□□□ -0.96
UBXN11-215ENST00000494942 MMP24-AS1A0A0U1RRL7 71 aa9.06□□□□□ -0.96
UBXN11-215ENST00000494942 LINC00483Q53H64 154 aa9.05□□□□□ -0.96
UBXN11-215ENST00000494942 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.05□□□□□ -0.96
UBXN11-215ENST00000494942 ZNF706Q9Y5V0 76 aaPredicted RBP9.04□□□□□ -0.96
UBXN11-215ENST00000494942 IGLV9-49A0A0B4J1Y8 123 aa9.03□□□□□ -0.96
UBXN11-215ENST00000494942 Q96NJ1 140 aa9.02□□□□□ -0.97
UBXN11-215ENST00000494942 A0A087WTM6 91 aa9□□□□□ -0.97
UBXN11-215ENST00000494942 MOBPQ13875 183 aa9□□□□□ -0.97
UBXN11-215ENST00000494942 TP53AIP1Q9HCN2 124 aa9□□□□□ -0.97
UBXN11-215ENST00000494942 V9GYY9 64 aa9□□□□□ -0.97
UBXN11-215ENST00000494942 DNAH7Q8WXX0 4024 aa9□□□□□ -0.97
UBXN11-215ENST00000494942 CSMD3Q7Z407 3707 aa8.99□□□□□ -0.97
UBXN11-215ENST00000494942 ASB16-AS1Q495Z4 193 aa8.99□□□□□ -0.97
UBXN11-215ENST00000494942 TENM2Q9NT68 2774 aa8.98□□□□□ -0.97
UBXN11-215ENST00000494942 IGLV5-52A0A0A0MRZ9 124 aa8.97□□□□□ -0.97
UBXN11-215ENST00000494942 WWC2-AS2Q96NR7 200 aa8.97□□□□□ -0.97
UBXN11-215ENST00000494942 C8orf17Q9NRJ1 99 aa8.96□□□□□ -0.98
UBXN11-215ENST00000494942 PSORS1C2Q9UIG4 136 aa8.96□□□□□ -0.98
UBXN11-215ENST00000494942 RTL8CO15255 209 aa8.95□□□□□ -0.98
UBXN11-215ENST00000494942 STARD9Q9P2P6 4700 aa8.95□□□□□ -0.98
UBXN11-215ENST00000494942 PLAC8Q9NZF1 115 aa8.94□□□□□ -0.98
UBXN11-215ENST00000494942 PLECQ15149 4684 aaKnown RBP8.94□□□□□ -0.98
UBXN11-215ENST00000494942 A0A1B0GVX0 72 aa8.93□□□□□ -0.98
UBXN11-215ENST00000494942 ZNF861PO60384 105 aa8.93□□□□□ -0.98
UBXN11-215ENST00000494942 IGLV7-46A0A075B6I9 117 aa8.93□□□□□ -0.98
UBXN11-215ENST00000494942 CDK2AP2O75956 126 aa8.93□□□□□ -0.98
UBXN11-215ENST00000494942 PSPHP1O15172 72 aa8.92□□□□□ -0.98
UBXN11-215ENST00000494942 Q6ZR54 194 aa8.92□□□□□ -0.98
UBXN11-215ENST00000494942 IGHV6-1A0A0B4J1U7 121 aa8.9□□□□□ -0.98
UBXN11-215ENST00000494942 C1orf195Q5TG92 126 aa8.9□□□□□ -0.98
UBXN11-215ENST00000494942 LIMD2Q9BT23 127 aa8.88□□□□□ -0.99
UBXN11-215ENST00000494942 MRPL34Q9BQ48 92 aaKnown RBP8.87□□□□□ -0.99
UBXN11-215ENST00000494942 Q8N9P0 234 aaPredicted RBP8.87□□□□□ -0.99
UBXN11-215ENST00000494942 A8MUN3 132 aa8.86□□□□□ -0.99
UBXN11-215ENST00000494942 NDUFS5O43920 106 aa8.86□□□□□ -0.99
UBXN11-215ENST00000494942 VPS13DQ5THJ4 4388 aa8.86□□□□□ -0.99
UBXN11-215ENST00000494942 ANAPC11Q9NYG5 84 aa8.86□□□□□ -0.99
UBXN11-215ENST00000494942 PCOTHQ58A44 107 aa8.85□□□□□ -0.99
UBXN11-215ENST00000494942 COA5Q86WW8 74 aa8.85□□□□□ -0.99
UBXN11-215ENST00000494942 CD164Q04900 197 aa8.83□□□□□ -1
UBXN11-215ENST00000494942 Q5VV11 94 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms