RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 SPANXA2-OT1Q8N9U9 137 aa7.61□□□□□ -1.19
BRCA1-222ENST00000493919 CDK2AP2O75956 126 aa7.6□□□□□ -1.19
BRCA1-222ENST00000493919 LINC00208Q96KT6 92 aa7.6□□□□□ -1.19
BRCA1-222ENST00000493919 IGLV4-3A0A075B6K6 122 aa7.6□□□□□ -1.19
BRCA1-222ENST00000493919 LCE2DQ5TA82 110 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-222ENST00000493919 M0R2N4 97 aa7.59□□□□□ -1.19
BRCA1-222ENST00000493919 SMIM11BQ8TCY0 68 aa7.59□□□□□ -1.19
BRCA1-222ENST00000493919 C1orf134Q5TEV5 83 aa7.58□□□□□ -1.2
BRCA1-222ENST00000493919 LINC01558Q9Y6Z2 57 aa7.58□□□□□ -1.2
BRCA1-222ENST00000493919 DNAH10Q8IVF4 4471 aa7.57□□□□□ -1.2
BRCA1-222ENST00000493919 SUMO4Q6EEV6 95 aa7.56□□□□□ -1.2
BRCA1-222ENST00000493919 FRAS1Q86XX4 4008 aa7.56□□□□□ -1.2
BRCA1-222ENST00000493919 LINC00315P59091 139 aa7.56□□□□□ -1.2
BRCA1-222ENST00000493919 ROMO1P60602 79 aa7.56□□□□□ -1.2
BRCA1-222ENST00000493919 PLAC8Q9NZF1 115 aa7.56□□□□□ -1.2
BRCA1-222ENST00000493919 IGHV3-38A0A0C4DH36 116 aa7.55□□□□□ -1.2
BRCA1-222ENST00000493919 RTL8CO15255 209 aa7.55□□□□□ -1.2
BRCA1-222ENST00000493919 WFDC10BQ8IUB3 73 aa7.55□□□□□ -1.2
BRCA1-222ENST00000493919 IGLV5-45A0A087WSX0 123 aa7.54□□□□□ -1.2
BRCA1-222ENST00000493919 NBDYA0A0U1RRE5 68 aa7.53□□□□□ -1.2
BRCA1-222ENST00000493919 M0QY20 66 aa7.53□□□□□ -1.2
BRCA1-222ENST00000493919 IGLV5-39A0A0G2JS06 123 aa7.52□□□□□ -1.2
BRCA1-222ENST00000493919 IGKV4-1P06312 121 aa7.52□□□□□ -1.2
BRCA1-222ENST00000493919 NTM-AS1Q6ZSK4 140 aa7.52□□□□□ -1.2
BRCA1-222ENST00000493919 LELP1Q5T871 98 aa7.52□□□□□ -1.21
BRCA1-222ENST00000493919 FAT2Q9NYQ8 4349 aa7.52□□□□□ -1.21
BRCA1-222ENST00000493919 J3QL48 77 aa7.51□□□□□ -1.21
BRCA1-222ENST00000493919 CNBPP62633 177 aaKnown RBP7.51□□□□□ -1.21
BRCA1-222ENST00000493919 KRTAP1-5Q9BYS1 174 aa7.51□□□□□ -1.21
BRCA1-222ENST00000493919 DNAH17Q9UFH2 4485 aa7.51□□□□□ -1.21
BRCA1-222ENST00000493919 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-222ENST00000493919 KRTAP16-1A8MUX0 517 aa7.5□□□□□ -1.21
BRCA1-222ENST00000493919 SLPIP03973 132 aa7.5□□□□□ -1.21
BRCA1-222ENST00000493919 Q6ZR54 194 aa7.5□□□□□ -1.21
BRCA1-222ENST00000493919 ADM2Q7Z4H4 148 aa7.5□□□□□ -1.21
BRCA1-222ENST00000493919 TNP2Q05952 138 aa7.5□□□□□ -1.21
BRCA1-222ENST00000493919 DEFB104AQ8WTQ1 72 aa7.5□□□□□ -1.21
BRCA1-222ENST00000493919 EPPK1P58107 5090 aaKnown RBP7.49□□□□□ -1.21
BRCA1-222ENST00000493919 IGKV2-28A0A075B6P5 120 aa7.48□□□□□ -1.21
BRCA1-222ENST00000493919 IGKV2D-28P01615 120 aa7.48□□□□□ -1.21
BRCA1-222ENST00000493919 DNAH10OSP0CZ25 163 aa7.48□□□□□ -1.21
BRCA1-222ENST00000493919 ETDCA0A1B0GVM5 59 aa7.47□□□□□ -1.21
BRCA1-222ENST00000493919 LINC01556Q5JQF7 62 aa7.47□□□□□ -1.21
BRCA1-222ENST00000493919 COX7B2Q8TF08 81 aa7.47□□□□□ -1.21
BRCA1-222ENST00000493919 A0A1W2PNM2 257 aa7.46□□□□□ -1.21
BRCA1-222ENST00000493919 HECTD4Q9Y4D8 3996 aa7.46□□□□□ -1.22
BRCA1-222ENST00000493919 IGLV4-60A0A075B6I1 120 aa7.44□□□□□ -1.22
BRCA1-222ENST00000493919 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-222ENST00000493919 H3BPC8 53 aa7.44□□□□□ -1.22
BRCA1-222ENST00000493919 HIGD2BQ4VC39 106 aa7.43□□□□□ -1.22
BRCA1-222ENST00000493919 CSAG1Q6PB30 78 aa7.43□□□□□ -1.22
BRCA1-222ENST00000493919 DNAH11Q96DT5 4516 aa7.43□□□□□ -1.22
BRCA1-222ENST00000493919 PKD1P98161 4303 aa7.43□□□□□ -1.22
BRCA1-222ENST00000493919 FAM104AQ969W3 186 aa7.42□□□□□ -1.22
BRCA1-222ENST00000493919 PKHD1P08F94 4074 aa7.42□□□□□ -1.22
BRCA1-222ENST00000493919 IGLV9-49A0A0B4J1Y8 123 aa7.42□□□□□ -1.22
BRCA1-222ENST00000493919 KLK12Q9UKR0 248 aa7.42□□□□□ -1.22
BRCA1-222ENST00000493919 SPAG11BQ08648 103 aa7.41□□□□□ -1.22
BRCA1-222ENST00000493919 SPAG11AQ6PDA7 123 aa7.41□□□□□ -1.22
BRCA1-222ENST00000493919 ANGP03950 147 aaKnown RBP7.4□□□□□ -1.22
BRCA1-222ENST00000493919 SPINK7P58062 85 aa7.4□□□□□ -1.22
BRCA1-222ENST00000493919 CLPSL2Q6UWE3 100 aa7.4□□□□□ -1.22
BRCA1-222ENST00000493919 CHCHD7Q9BUK0 85 aa7.4□□□□□ -1.22
BRCA1-222ENST00000493919 KCNQ1DNQ9H478 68 aa7.4□□□□□ -1.23
BRCA1-222ENST00000493919 CDKN2A-AS1Q9UH64 79 aa7.39□□□□□ -1.23
BRCA1-222ENST00000493919 Q6ZRN7 208 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-222ENST00000493919 Q8NDZ9 215 aa7.39□□□□□ -1.23
BRCA1-222ENST00000493919 MIR22HGQ0VDD5 57 aa7.38□□□□□ -1.23
BRCA1-222ENST00000493919 PRR4Q16378 134 aa7.38□□□□□ -1.23
BRCA1-222ENST00000493919 IGKV2D-24A0A075B6R9 120 aa7.37□□□□□ -1.23
BRCA1-222ENST00000493919 SMIM29Q86T20 159 aa7.37□□□□□ -1.23
BRCA1-222ENST00000493919 DNAH5Q8TE73 4624 aa7.36□□□□□ -1.23
BRCA1-222ENST00000493919 H0Y9P7 68 aa7.36□□□□□ -1.23
BRCA1-222ENST00000493919 COA5Q86WW8 74 aa7.36□□□□□ -1.23
BRCA1-222ENST00000493919 DYNC1H1Q14204 4646 aaKnown RBP7.35□□□□□ -1.23
BRCA1-222ENST00000493919 IGKV3OR2-268A0A0C4DH90 116 aa7.35□□□□□ -1.23
BRCA1-222ENST00000493919 BIRC6Q9NR09 4857 aa7.35□□□□□ -1.23
BRCA1-222ENST00000493919 A0A1B0GUV1 79 aa7.35□□□□□ -1.23
BRCA1-222ENST00000493919 SMIM1B2RUZ4 78 aa7.35□□□□□ -1.23
BRCA1-222ENST00000493919 COX7BP24311 80 aa7.35□□□□□ -1.23
BRCA1-222ENST00000493919 IGLV10-54A0A075B6I4 117 aa7.34□□□□□ -1.23
BRCA1-222ENST00000493919 A0A1B0GVY2 172 aa7.33□□□□□ -1.24
BRCA1-222ENST00000493919 REG3GQ6UW15 175 aa7.33□□□□□ -1.24
BRCA1-222ENST00000493919 PRR34Q9NV39 138 aa7.33□□□□□ -1.24
BRCA1-222ENST00000493919 A0A087WTM6 91 aa7.32□□□□□ -1.24
BRCA1-222ENST00000493919 CHTF8P0CG12 524 aa7.31□□□□□ -1.24
BRCA1-222ENST00000493919 LINC00575Q6W349 94 aa7.31□□□□□ -1.24
BRCA1-222ENST00000493919 LRP1BQ9NZR2 4599 aa7.31□□□□□ -1.24
BRCA1-222ENST00000493919 LINC00158P58513 81 aa7.29□□□□□ -1.24
BRCA1-222ENST00000493919 KRTAP10-2P60368 255 aa7.29□□□□□ -1.24
BRCA1-222ENST00000493919 Q8N9L7 120 aa7.27□□□□□ -1.25
BRCA1-222ENST00000493919 A0A087WSZ3 146 aa7.26□□□□□ -1.25
BRCA1-222ENST00000493919 SPATA8Q6RVD6 105 aa7.26□□□□□ -1.25
BRCA1-222ENST00000493919 ST20-AS1Q8NBB2 130 aa7.26□□□□□ -1.25
BRCA1-222ENST00000493919 LINC00959A0A1B0GUT2 108 aa7.25□□□□□ -1.25
BRCA1-222ENST00000493919 KRTAP26-1Q6PEX3 210 aa7.25□□□□□ -1.25
BRCA1-222ENST00000493919 IGLV7-46A0A075B6I9 117 aa7.25□□□□□ -1.25
BRCA1-222ENST00000493919 IGLV5-52A0A0A0MRZ9 124 aa7.25□□□□□ -1.25
BRCA1-222ENST00000493919 APOBP04114 4563 aaKnown RBP7.24□□□□□ -1.25
BRCA1-222ENST00000493919 P0C880 135 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms