RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 NSD1Q96L73 2696 aaPredicted RBP4.42□□□□□ -1.7
VPS13B-205ENST00000493587 TENM1Q9UKZ4 2725 aa4.42□□□□□ -1.7
VPS13B-205ENST00000493587 IGLV7-46A0A075B6I9 117 aa4.42□□□□□ -1.7
VPS13B-205ENST00000493587 Q8N377 158 aa4.42□□□□□ -1.7
VPS13B-205ENST00000493587 SMR3AQ99954 134 aa4.42□□□□□ -1.7
VPS13B-205ENST00000493587 HIVEP1P15822 2718 aa4.42□□□□□ -1.7
VPS13B-205ENST00000493587 CCDC168Q8NDH2 2452 aa4.42□□□□□ -1.7
VPS13B-205ENST00000493587 HUWE1Q7Z6Z7 4374 aaKnown RBP4.41□□□□□ -1.7
VPS13B-205ENST00000493587 A0A087WSZ3 146 aa4.41□□□□□ -1.7
VPS13B-205ENST00000493587 INAFM1C9JVW0 142 aa4.41□□□□□ -1.7
VPS13B-205ENST00000493587 CAMK2N2Q96S95 79 aa4.41□□□□□ -1.7
VPS13B-205ENST00000493587 IGLV1-50A0A075B6I6 118 aa4.4□□□□□ -1.7
VPS13B-205ENST00000493587 A0A1B0GW54 56 aa4.4□□□□□ -1.7
VPS13B-205ENST00000493587 MIR22HGQ0VDD5 57 aa4.4□□□□□ -1.7
VPS13B-205ENST00000493587 REG3GQ6UW15 175 aa4.4□□□□□ -1.7
VPS13B-205ENST00000493587 A0A0G2JQZ4 141 aa4.4□□□□□ -1.71
VPS13B-205ENST00000493587 A0A1W2PNN7 141 aa4.4□□□□□ -1.71
VPS13B-205ENST00000493587 DNAH9Q9NYC9 4486 aa4.4□□□□□ -1.71
VPS13B-205ENST00000493587 KRTAP10-3P60369 221 aa4.4□□□□□ -1.71
VPS13B-205ENST00000493587 C4orf3Q8WVX3 66 aa4.4□□□□□ -1.71
VPS13B-205ENST00000493587 IGLV5-48A0A075B6I7 105 aa4.39□□□□□ -1.71
VPS13B-205ENST00000493587 ASB16-AS1Q495Z4 193 aa4.39□□□□□ -1.71
VPS13B-205ENST00000493587 C9orf163Q8N9P6 203 aa4.39□□□□□ -1.71
VPS13B-205ENST00000493587 A0A1B0GU69 56 aa4.39□□□□□ -1.71
VPS13B-205ENST00000493587 ROMO1P60602 79 aa4.38□□□□□ -1.71
VPS13B-205ENST00000493587 CNBPP62633 177 aaKnown RBP4.38□□□□□ -1.71
VPS13B-205ENST00000493587 SETD2Q9BYW2 2564 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-205ENST00000493587 RTL8CO15255 209 aa4.38□□□□□ -1.71
VPS13B-205ENST00000493587 C16orf74Q96GX8 76 aa4.38□□□□□ -1.71
VPS13B-205ENST00000493587 C19orf73Q9NVV2 129 aa4.38□□□□□ -1.71
VPS13B-205ENST00000493587 GIG44P09565 113 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-205ENST00000493587 A0A1B0GUV1 79 aa4.37□□□□□ -1.71
VPS13B-205ENST00000493587 HRES1P13985 223 aa4.37□□□□□ -1.71
VPS13B-205ENST00000493587 C6orf48Q9UBA6 75 aa4.37□□□□□ -1.71
VPS13B-205ENST00000493587 MTORP42345 2549 aa4.37□□□□□ -1.71
VPS13B-205ENST00000493587 FBN1P35555 2871 aaKnown RBP4.36□□□□□ -1.71
VPS13B-205ENST00000493587 RPL37AP8A6NKH3 93 aa4.36□□□□□ -1.71
VPS13B-205ENST00000493587 PLAC8Q9NZF1 115 aa4.36□□□□□ -1.71
VPS13B-205ENST00000493587 DHRS4-AS1Q9P1J3 65 aa4.36□□□□□ -1.71
VPS13B-205ENST00000493587 UQCR11O14957 56 aa4.34□□□□□ -1.71
VPS13B-205ENST00000493587 CSNK1G2-AS1Q8NCQ2 148 aa4.34□□□□□ -1.71
VPS13B-205ENST00000493587 SPRR4Q96PI1 79 aa4.34□□□□□ -1.71
VPS13B-205ENST00000493587 DNAH6Q9C0G6 4158 aa4.34□□□□□ -1.71
VPS13B-205ENST00000493587 HTN3P15516 51 aa4.34□□□□□ -1.72
VPS13B-205ENST00000493587 IGLV8-61A0A075B6I0 122 aa4.33□□□□□ -1.72
VPS13B-205ENST00000493587 FLG2Q5D862 2391 aaPredicted RBP4.33□□□□□ -1.72
VPS13B-205ENST00000493587 A8MWP4 228 aa4.33□□□□□ -1.72
VPS13B-205ENST00000493587 FRAS1Q86XX4 4008 aa4.32□□□□□ -1.72
VPS13B-205ENST00000493587 PRO0255Q9UI72 69 aa4.31□□□□□ -1.72
VPS13B-205ENST00000493587 IGLV5-37A0A075B6J1 123 aa4.31□□□□□ -1.72
VPS13B-205ENST00000493587 KRTAP29-1A8MX34 341 aaPredicted RBP4.31□□□□□ -1.72
VPS13B-205ENST00000493587 A0A096LNI7 61 aa4.3□□□□□ -1.72
VPS13B-205ENST00000493587 EGFEM1PQ0D2K5 195 aa4.3□□□□□ -1.72
VPS13B-205ENST00000493587 SPATA8Q6RVD6 105 aa4.3□□□□□ -1.72
VPS13B-205ENST00000493587 Q6ZRX8 168 aa4.3□□□□□ -1.72
VPS13B-205ENST00000493587 PKD1L1Q8TDX9 2849 aa4.3□□□□□ -1.72
VPS13B-205ENST00000493587 DNAH10Q8IVF4 4471 aa4.3□□□□□ -1.72
VPS13B-205ENST00000493587 IGFL1Q6UW32 110 aa4.29□□□□□ -1.72
VPS13B-205ENST00000493587 HECTD4Q9Y4D8 3996 aa4.28□□□□□ -1.72
VPS13B-205ENST00000493587 GVQW2A0A096LPI5 108 aaPredicted RBP4.28□□□□□ -1.72
VPS13B-205ENST00000493587 ACYP2P14621 99 aa4.28□□□□□ -1.72
VPS13B-205ENST00000493587 HIVEP2P31629 2446 aa4.28□□□□□ -1.72
VPS13B-205ENST00000493587 IGKV2-24A0A0C4DH68 120 aa4.28□□□□□ -1.72
VPS13B-205ENST00000493587 TEP1Q99973 2627 aaKnown RBP4.28□□□□□ -1.73
VPS13B-205ENST00000493587 A0A087X002 238 aa4.27□□□□□ -1.73
VPS13B-205ENST00000493587 TNP2Q05952 138 aa4.27□□□□□ -1.73
VPS13B-205ENST00000493587 SPINT4Q6UDR6 99 aa4.27□□□□□ -1.73
VPS13B-205ENST00000493587 NBEAL2Q6ZNJ1 2754 aa4.27□□□□□ -1.73
VPS13B-205ENST00000493587 KRTAP16-1A8MUX0 517 aa4.27□□□□□ -1.73
VPS13B-205ENST00000493587 DEFB131BA0A096LNP1 70 aa4.26□□□□□ -1.73
VPS13B-205ENST00000493587 DEFB4AO15263 64 aa4.26□□□□□ -1.73
VPS13B-205ENST00000493587 KRTAP25-1Q3LHN0 102 aa4.26□□□□□ -1.73
VPS13B-205ENST00000493587 TP53AIP1Q9HCN2 124 aa4.26□□□□□ -1.73
VPS13B-205ENST00000493587 DNAH10OSP0CZ25 163 aa4.26□□□□□ -1.73
VPS13B-205ENST00000493587 CRIPTQ9P021 101 aa4.26□□□□□ -1.73
VPS13B-205ENST00000493587 CDK2AP2O75956 126 aa4.26□□□□□ -1.73
VPS13B-205ENST00000493587 CMC4P56277 68 aaPredicted RBP4.26□□□□□ -1.73
VPS13B-205ENST00000493587 NOTCH2Q04721 2471 aa4.25□□□□□ -1.73
VPS13B-205ENST00000493587 VPS13DQ5THJ4 4388 aa4.24□□□□□ -1.73
VPS13B-205ENST00000493587 ZNF861PO60384 105 aa4.24□□□□□ -1.73
VPS13B-205ENST00000493587 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
VPS13B-205ENST00000493587 SSBP3-AS1Q7Z2R9 100 aa4.23□□□□□ -1.73
VPS13B-205ENST00000493587 ATRQ13535 2644 aa4.23□□□□□ -1.73
VPS13B-205ENST00000493587 MMP24-AS1A0A0U1RRL7 71 aa4.23□□□□□ -1.73
VPS13B-205ENST00000493587 DNAH2Q9P225 4427 aa4.22□□□□□ -1.73
VPS13B-205ENST00000493587 BAHCC1Q9P281 2608 aa4.22□□□□□ -1.73
VPS13B-205ENST00000493587 PLECQ15149 4684 aaKnown RBP4.22□□□□□ -1.73
VPS13B-205ENST00000493587 P0C880 135 aa4.22□□□□□ -1.73
VPS13B-205ENST00000493587 COL7A1Q02388 2944 aa4.22□□□□□ -1.73
VPS13B-205ENST00000493587 STARD9Q9P2P6 4700 aa4.21□□□□□ -1.74
VPS13B-205ENST00000493587 MAST4O15021 2626 aa4.21□□□□□ -1.74
VPS13B-205ENST00000493587 FLNBO75369 2602 aaKnown RBP4.21□□□□□ -1.74
VPS13B-205ENST00000493587 A8MUU9 505 aa4.2□□□□□ -1.74
VPS13B-205ENST00000493587 PRLHP81277 87 aa4.2□□□□□ -1.74
VPS13B-205ENST00000493587 FAM168BA1KXE4 195 aa4.2□□□□□ -1.74
VPS13B-205ENST00000493587 LELP1Q5T871 98 aa4.2□□□□□ -1.74
VPS13B-205ENST00000493587 X6R8D5 127 aa4.2□□□□□ -1.74
VPS13B-205ENST00000493587 KRTAP24-1Q3LI83 254 aa4.19□□□□□ -1.74
VPS13B-205ENST00000493587 LINC00483Q53H64 154 aa4.19□□□□□ -1.74
VPS13B-205ENST00000493587 DNAH17Q9UFH2 4485 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms