RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 Q9BRP9 147 aa6.31□□□□□ -1.4
PRPF3-206ENST00000493553 MEGF8Q7Z7M0 2845 aa6.31□□□□□ -1.4
PRPF3-206ENST00000493553 TENM2Q9NT68 2774 aa6.29□□□□□ -1.4
PRPF3-206ENST00000493553 BCE1O60756 84 aa6.29□□□□□ -1.4
PRPF3-206ENST00000493553 CXCL6P80162 114 aa6.29□□□□□ -1.4
PRPF3-206ENST00000493553 DEFB105AQ8NG35 78 aa6.29□□□□□ -1.4
PRPF3-206ENST00000493553 SPACA4Q8TDM5 124 aa6.29□□□□□ -1.4
PRPF3-206ENST00000493553 RTL8CO15255 209 aa6.28□□□□□ -1.4
PRPF3-206ENST00000493553 LY6G6CO95867 125 aa6.28□□□□□ -1.4
PRPF3-206ENST00000493553 UBE2AP49459 152 aa6.28□□□□□ -1.4
PRPF3-206ENST00000493553 LINC01547P58512 204 aaPredicted RBP6.28□□□□□ -1.4
PRPF3-206ENST00000493553 IGLV5-52A0A0A0MRZ9 124 aa6.27□□□□□ -1.41
PRPF3-206ENST00000493553 ATOX1O00244 68 aa6.27□□□□□ -1.41
PRPF3-206ENST00000493553 SPRR1BP22528 89 aa6.27□□□□□ -1.41
PRPF3-206ENST00000493553 PHF5AQ7RTV0 110 aaKnown RBP6.26□□□□□ -1.41
PRPF3-206ENST00000493553 ZNF706Q9Y5V0 76 aaPredicted RBP6.26□□□□□ -1.41
PRPF3-206ENST00000493553 FBN3Q75N90 2809 aa6.25□□□□□ -1.41
PRPF3-206ENST00000493553 IGLV8-61A0A075B6I0 122 aa6.25□□□□□ -1.41
PRPF3-206ENST00000493553 FAM236AA0A1B0GUQ0 79 aa6.25□□□□□ -1.41
PRPF3-206ENST00000493553 FAM236BA0A1B0GV22 79 aa6.25□□□□□ -1.41
PRPF3-206ENST00000493553 CHTF8P0CG12 524 aa6.25□□□□□ -1.41
PRPF3-206ENST00000493553 NREPQ16612 68 aa6.25□□□□□ -1.41
PRPF3-206ENST00000493553 C1orf137Q5JT78 98 aa6.25□□□□□ -1.41
PRPF3-206ENST00000493553 Q6ZVQ6 151 aa6.25□□□□□ -1.41
PRPF3-206ENST00000493553 HIGD2AQ9BW72 106 aa6.25□□□□□ -1.41
PRPF3-206ENST00000493553 PLAC8Q9NZF1 115 aa6.25□□□□□ -1.41
PRPF3-206ENST00000493553 IGKV3D-7A0A0C4DH55 119 aa6.24□□□□□ -1.41
PRPF3-206ENST00000493553 SMIM20Q8N5G0 67 aa6.24□□□□□ -1.41
PRPF3-206ENST00000493553 Q8NBF4 154 aa6.24□□□□□ -1.41
PRPF3-206ENST00000493553 ERC2-IT1O76042 136 aa6.23□□□□□ -1.41
PRPF3-206ENST00000493553 RPL37AP61513 92 aaKnown RBP6.23□□□□□ -1.41
PRPF3-206ENST00000493553 HIST1H4AP62805 103 aaKnown RBP6.23□□□□□ -1.41
PRPF3-206ENST00000493553 HAMPP81172 84 aa6.23□□□□□ -1.41
PRPF3-206ENST00000493553 ST20-AS1Q8NBB2 130 aa6.23□□□□□ -1.41
PRPF3-206ENST00000493553 DNAH1Q9P2D7 4330 aa6.22□□□□□ -1.41
PRPF3-206ENST00000493553 PRLHP81277 87 aa6.22□□□□□ -1.41
PRPF3-206ENST00000493553 SPRR4Q96PI1 79 aa6.22□□□□□ -1.41
PRPF3-206ENST00000493553 CRYGAP11844 174 aa6.21□□□□□ -1.42
PRPF3-206ENST00000493553 PRKDCP78527 4128 aaKnown RBP6.2□□□□□ -1.42
PRPF3-206ENST00000493553 DNAH7Q8WXX0 4024 aa6.19□□□□□ -1.42
PRPF3-206ENST00000493553 BPY2O14599 106 aa6.19□□□□□ -1.42
PRPF3-206ENST00000493553 UQCRQO14949 82 aa6.19□□□□□ -1.42
PRPF3-206ENST00000493553 SMIM29Q86T20 159 aa6.19□□□□□ -1.42
PRPF3-206ENST00000493553 KRTAP13-1Q8IUC0 172 aa6.19□□□□□ -1.42
PRPF3-206ENST00000493553 PLECQ15149 4684 aaKnown RBP6.18□□□□□ -1.42
PRPF3-206ENST00000493553 VPS13DQ5THJ4 4388 aa6.18□□□□□ -1.42
PRPF3-206ENST00000493553 A0A1W2PNM2 257 aa6.17□□□□□ -1.42
PRPF3-206ENST00000493553 SERP2Q8N6R1 65 aa6.17□□□□□ -1.42
PRPF3-206ENST00000493553 MPLKIPQ8TAP9 179 aa6.17□□□□□ -1.42
PRPF3-206ENST00000493553 DNHD1Q96M86 4753 aa6.16□□□□□ -1.42
PRPF3-206ENST00000493553 PANO1I0J062 215 aa6.16□□□□□ -1.42
PRPF3-206ENST00000493553 ZNF861PO60384 105 aa6.16□□□□□ -1.42
PRPF3-206ENST00000493553 C3orf22Q8N5N4 141 aa6.16□□□□□ -1.42
PRPF3-206ENST00000493553 CSMD3Q7Z407 3707 aa6.15□□□□□ -1.42
PRPF3-206ENST00000493553 COX7CP15954 63 aa6.15□□□□□ -1.42
PRPF3-206ENST00000493553 LINC00483Q53H64 154 aa6.15□□□□□ -1.42
PRPF3-206ENST00000493553 IGFL1Q6UW32 110 aa6.14□□□□□ -1.43
PRPF3-206ENST00000493553 LINC00336Q6ZUF6 198 aa6.14□□□□□ -1.43
PRPF3-206ENST00000493553 KRTAP11-1Q8IUC1 163 aa6.14□□□□□ -1.43
PRPF3-206ENST00000493553 PSORS1C2Q9UIG4 136 aa6.14□□□□□ -1.43
PRPF3-206ENST00000493553 TGP01266 2768 aa6.13□□□□□ -1.43
PRPF3-206ENST00000493553 TRAV7A0A075B6U4 112 aa6.12□□□□□ -1.43
PRPF3-206ENST00000493553 J3KT08 172 aa6.12□□□□□ -1.43
PRPF3-206ENST00000493553 SS18L2Q9UHA2 77 aa6.12□□□□□ -1.43
PRPF3-206ENST00000493553 A0A087WVE0 104 aa6.11□□□□□ -1.43
PRPF3-206ENST00000493553 STARD9Q9P2P6 4700 aa6.11□□□□□ -1.43
PRPF3-206ENST00000493553 IGLV7-43P04211 117 aa6.1□□□□□ -1.43
PRPF3-206ENST00000493553 C9orf153Q5TBE3 101 aa6.1□□□□□ -1.43
PRPF3-206ENST00000493553 Q6ZSA8 131 aa6.1□□□□□ -1.43
PRPF3-206ENST00000493553 CCDC179H3BU77 68 aa6.08□□□□□ -1.44
PRPF3-206ENST00000493553 DNAH6Q9C0G6 4158 aa6.07□□□□□ -1.44
PRPF3-206ENST00000493553 A0A087WSZ3 146 aa6.07□□□□□ -1.44
PRPF3-206ENST00000493553 LCE6AA0A183 80 aa6.07□□□□□ -1.44
PRPF3-206ENST00000493553 IGKV4-1P06312 121 aa6.07□□□□□ -1.44
PRPF3-206ENST00000493553 SCXQ7RTU7 201 aa6.07□□□□□ -1.44
PRPF3-206ENST00000493553 CIRBP-AS1Q8TBR5 109 aa6.06□□□□□ -1.44
PRPF3-206ENST00000493553 ALMS1Q8TCU4 4167 aa6.06□□□□□ -1.44
PRPF3-206ENST00000493553 NDUFB1O75438 58 aa6.05□□□□□ -1.44
PRPF3-206ENST00000493553 CD164Q04900 197 aa6.05□□□□□ -1.44
PRPF3-206ENST00000493553 SSBP3-AS1Q7Z2R9 100 aa6.05□□□□□ -1.44
PRPF3-206ENST00000493553 DNAH10Q8IVF4 4471 aa6.04□□□□□ -1.44
PRPF3-206ENST00000493553 IGKV2D-30A0A075B6S6 120 aa6.04□□□□□ -1.44
PRPF3-206ENST00000493553 FAM229BQ4G0N7 80 aa6.04□□□□□ -1.44
PRPF3-206ENST00000493553 IGLV9-49A0A0B4J1Y8 123 aa6.03□□□□□ -1.44
PRPF3-206ENST00000493553 NDUFC1O43677 76 aa6.03□□□□□ -1.44
PRPF3-206ENST00000493553 LYSTQ99698 3801 aa6.02□□□□□ -1.45
PRPF3-206ENST00000493553 DSCR10P59022 87 aa6.02□□□□□ -1.45
PRPF3-206ENST00000493553 KRTAP10-1P60331 282 aa6.02□□□□□ -1.45
PRPF3-206ENST00000493553 A8MWP4 228 aa6.01□□□□□ -1.45
PRPF3-206ENST00000493553 HCG22E2RYF7 251 aa6.01□□□□□ -1.45
PRPF3-206ENST00000493553 LINC00472Q9H8W2 130 aa6.01□□□□□ -1.45
PRPF3-206ENST00000493553 CDK2AP2O75956 126 aa6□□□□□ -1.45
PRPF3-206ENST00000493553 TMEM258P61165 79 aa6□□□□□ -1.45
PRPF3-206ENST00000493553 MOBPQ13875 183 aa6□□□□□ -1.45
PRPF3-206ENST00000493553 PRR15Q8IV56 129 aa6□□□□□ -1.45
PRPF3-206ENST00000493553 DNAH17Q9UFH2 4485 aa5.99□□□□□ -1.45
PRPF3-206ENST00000493553 Q8N9L7 120 aa5.99□□□□□ -1.45
PRPF3-206ENST00000493553 K7EQZ3 153 aa5.98□□□□□ -1.45
PRPF3-206ENST00000493553 KLKP1Q107X0 134 aa5.98□□□□□ -1.45
PRPF3-206ENST00000493553 C20orf197Q8N268 126 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms