RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 LINC00518Q8N0U6 118 aa5.07□□□□□ -1.6
TNFRSF9-203ENST00000492571 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
TNFRSF9-203ENST00000492571 MACF1Q9UPN3 7388 aaKnown RBP5.06□□□□□ -1.6
TNFRSF9-203ENST00000492571 SSPOA2VEC9 5147 aa5.06□□□□□ -1.6
TNFRSF9-203ENST00000492571 A0A0J9YXY3 114 aa5.06□□□□□ -1.6
TNFRSF9-203ENST00000492571 C6orf99Q4VX62 202 aa5.06□□□□□ -1.6
TNFRSF9-203ENST00000492571 ADAMTSL4-AS1Q5T5F5 129 aa5.06□□□□□ -1.6
TNFRSF9-203ENST00000492571 PMCHL2Q9BQD1 86 aa5.06□□□□□ -1.6
TNFRSF9-203ENST00000492571 E9PLD3 99 aa5.05□□□□□ -1.6
TNFRSF9-203ENST00000492571 TRIAP1O43715 76 aa5.05□□□□□ -1.6
TNFRSF9-203ENST00000492571 LINC00308Q8TCZ7 52 aa5.04□□□□□ -1.6
TNFRSF9-203ENST00000492571 LINC00846Q9NV44 126 aa5.04□□□□□ -1.6
TNFRSF9-203ENST00000492571 TRBV7-6A0A0J9YX20 115 aa5.03□□□□□ -1.6
TNFRSF9-203ENST00000492571 F8WEM9 126 aa5.03□□□□□ -1.6
TNFRSF9-203ENST00000492571 Q75L30 129 aa5.03□□□□□ -1.6
TNFRSF9-203ENST00000492571 NHP2Q9NX24 153 aaKnown RBP5.03□□□□□ -1.6
TNFRSF9-203ENST00000492571 FCGBPQ9Y6R7 5405 aaPredicted RBP5.02□□□□□ -1.61
TNFRSF9-203ENST00000492571 A0A0G2JQZ4 141 aa5.02□□□□□ -1.61
TNFRSF9-203ENST00000492571 A0A1B0GWB2 263 aa5.02□□□□□ -1.61
TNFRSF9-203ENST00000492571 SYS1-DBNDD2H3BUS1 97 aa5.02□□□□□ -1.61
TNFRSF9-203ENST00000492571 OBSCN-AS1Q96MR7 158 aa5.02□□□□□ -1.61
TNFRSF9-203ENST00000492571 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
TNFRSF9-203ENST00000492571 IGLV5-48A0A075B6I7 105 aa5.01□□□□□ -1.61
TNFRSF9-203ENST00000492571 A4D1N5 150 aa5.01□□□□□ -1.61
TNFRSF9-203ENST00000492571 HIST1H2BKO60814 126 aa5.01□□□□□ -1.61
TNFRSF9-203ENST00000492571 HIST1H2BJP06899 126 aa5.01□□□□□ -1.61
TNFRSF9-203ENST00000492571 HIST1H2BOP23527 126 aa5.01□□□□□ -1.61
TNFRSF9-203ENST00000492571 HIST1H2BBP33778 126 aa5.01□□□□□ -1.61
TNFRSF9-203ENST00000492571 HIST1H2BDP58876 126 aa5.01□□□□□ -1.61
TNFRSF9-203ENST00000492571 HIST1H2BCP62807 126 aa5.01□□□□□ -1.61
TNFRSF9-203ENST00000492571 HIST2H2BEQ16778 126 aa5.01□□□□□ -1.61
TNFRSF9-203ENST00000492571 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.01□□□□□ -1.61
TNFRSF9-203ENST00000492571 HIST1H2BHQ93079 126 aa5.01□□□□□ -1.61
TNFRSF9-203ENST00000492571 HIST1H2BNQ99877 126 aa5.01□□□□□ -1.61
TNFRSF9-203ENST00000492571 HIST1H2BMQ99879 126 aa5.01□□□□□ -1.61
TNFRSF9-203ENST00000492571 TIMM17BO60830 172 aa5□□□□□ -1.61
TNFRSF9-203ENST00000492571 KRTAP10-7P60409 375 aaPredicted RBP5□□□□□ -1.61
TNFRSF9-203ENST00000492571 LINC01545Q5VT33 79 aa5□□□□□ -1.61
TNFRSF9-203ENST00000492571 PET117Q6UWS5 81 aa5□□□□□ -1.61
TNFRSF9-203ENST00000492571 COPS9Q8WXC6 57 aa5□□□□□ -1.61
TNFRSF9-203ENST00000492571 LITAFQ99732 161 aa5□□□□□ -1.61
TNFRSF9-203ENST00000492571 A6NDN8 102 aa4.99□□□□□ -1.61
TNFRSF9-203ENST00000492571 Q96NJ1 140 aa4.98□□□□□ -1.61
TNFRSF9-203ENST00000492571 FAM236DA0A1B0GTK5 79 aa4.97□□□□□ -1.61
TNFRSF9-203ENST00000492571 ZNF815PA8K554 130 aa4.97□□□□□ -1.61
TNFRSF9-203ENST00000492571 FAM236CP0DP71 79 aa4.97□□□□□ -1.61
TNFRSF9-203ENST00000492571 Q6JHZ5 121 aa4.97□□□□□ -1.61
TNFRSF9-203ENST00000492571 C3orf79P0CE67 100 aa4.96□□□□□ -1.62
TNFRSF9-203ENST00000492571 COA6Q5JTJ3 125 aaKnown RBP4.96□□□□□ -1.62
TNFRSF9-203ENST00000492571 KRTAP5-11Q6L8G4 156 aa4.96□□□□□ -1.62
TNFRSF9-203ENST00000492571 TMA7Q9Y2S6 64 aaKnown RBP4.96□□□□□ -1.62
TNFRSF9-203ENST00000492571 TRAV13-2A0A0B4J235 113 aa4.95□□□□□ -1.62
TNFRSF9-203ENST00000492571 TRBV7-7A0A0K0K1E9 115 aa4.95□□□□□ -1.62
TNFRSF9-203ENST00000492571 LST1O00453 97 aa4.95□□□□□ -1.62
TNFRSF9-203ENST00000492571 KRTAP10-10P60014 251 aa4.95□□□□□ -1.62
TNFRSF9-203ENST00000492571 VAMP3Q15836 100 aa4.95□□□□□ -1.62
TNFRSF9-203ENST00000492571 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.94□□□□□ -1.62
TNFRSF9-203ENST00000492571 SCGB1D4Q6XE38 83 aa4.94□□□□□ -1.62
TNFRSF9-203ENST00000492571 CLEC2BQ92478 149 aa4.94□□□□□ -1.62
TNFRSF9-203ENST00000492571 TTTY13Q9BZ97 58 aa4.94□□□□□ -1.62
TNFRSF9-203ENST00000492571 MT2AP02795 61 aa4.93□□□□□ -1.62
TNFRSF9-203ENST00000492571 KRTDAPP60985 99 aa4.93□□□□□ -1.62
TNFRSF9-203ENST00000492571 IGFL1Q6UW32 110 aa4.93□□□□□ -1.62
TNFRSF9-203ENST00000492571 IFITM1P13164 125 aa4.92□□□□□ -1.62
TNFRSF9-203ENST00000492571 Q6ZVH6 145 aa4.92□□□□□ -1.62
TNFRSF9-203ENST00000492571 RBM12B-AS1Q9P1G2 102 aa4.92□□□□□ -1.62
TNFRSF9-203ENST00000492571 OCIAD2Q56VL3 154 aa4.91□□□□□ -1.62
TNFRSF9-203ENST00000492571 C20orf166-AS1Q96NR2 134 aa4.91□□□□□ -1.62
TNFRSF9-203ENST00000492571 SS18L2Q9UHA2 77 aa4.9□□□□□ -1.63
TNFRSF9-203ENST00000492571 SCGB1D1O95968 90 aa4.89□□□□□ -1.63
TNFRSF9-203ENST00000492571 SMIM11BQ8TCY0 68 aa4.89□□□□□ -1.63
TNFRSF9-203ENST00000492571 SNHG12Q9BXW3 62 aa4.89□□□□□ -1.63
TNFRSF9-203ENST00000492571 hADV29S1A0JD25 119 aa4.88□□□□□ -1.63
TNFRSF9-203ENST00000492571 A8MUU9 505 aa4.88□□□□□ -1.63
TNFRSF9-203ENST00000492571 MT1FP04733 61 aa4.88□□□□□ -1.63
TNFRSF9-203ENST00000492571 SNRPEP62304 92 aaKnown RBP4.88□□□□□ -1.63
TNFRSF9-203ENST00000492571 Q6ZQY7 126 aa4.88□□□□□ -1.63
TNFRSF9-203ENST00000492571 MUSTN1Q8IVN3 82 aa4.88□□□□□ -1.63
TNFRSF9-203ENST00000492571 ATOH7Q8N100 152 aa4.87□□□□□ -1.63
TNFRSF9-203ENST00000492571 LINC00575Q6W349 94 aa4.86□□□□□ -1.63
TNFRSF9-203ENST00000492571 MTURNQ8N3F0 131 aa4.86□□□□□ -1.63
TNFRSF9-203ENST00000492571 PPDPFLQ8WWR9 84 aa4.85□□□□□ -1.63
TNFRSF9-203ENST00000492571 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.83□□□□□ -1.64
TNFRSF9-203ENST00000492571 SNCGO76070 127 aa4.82□□□□□ -1.64
TNFRSF9-203ENST00000492571 KRTAP19-6Q3LI70 58 aa4.82□□□□□ -1.64
TNFRSF9-203ENST00000492571 HIST3H2BBQ8N257 126 aa4.82□□□□□ -1.64
TNFRSF9-203ENST00000492571 HIST1H2BLQ99880 126 aa4.82□□□□□ -1.64
TNFRSF9-203ENST00000492571 HSBP1L1C9JCN9 74 aa4.81□□□□□ -1.64
TNFRSF9-203ENST00000492571 H3BUT2 72 aa4.81□□□□□ -1.64
TNFRSF9-203ENST00000492571 S100A2P29034 98 aa4.81□□□□□ -1.64
TNFRSF9-203ENST00000492571 LINC00313P59037 77 aa4.81□□□□□ -1.64
TNFRSF9-203ENST00000492571 KRTAP6-3Q3LI67 103 aa4.81□□□□□ -1.64
TNFRSF9-203ENST00000492571 TEN1Q86WV5 123 aa4.81□□□□□ -1.64
TNFRSF9-203ENST00000492571 C12orf57Q99622 126 aa4.81□□□□□ -1.64
TNFRSF9-203ENST00000492571 IGKV2D-30A0A075B6S6 120 aa4.8□□□□□ -1.64
TNFRSF9-203ENST00000492571 DSCR10P59022 87 aa4.8□□□□□ -1.64
TNFRSF9-203ENST00000492571 BVES-AS1Q5T3Y7 98 aa4.79□□□□□ -1.64
TNFRSF9-203ENST00000492571 SIGMAR1Q99720 223 aa4.79□□□□□ -1.64
TNFRSF9-203ENST00000492571 A0A087WSZ3 146 aa4.78□□□□□ -1.64
TNFRSF9-203ENST00000492571 S100A6P06703 90 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms