RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 EPM2AB3EWF7 344 aa7.77□□□□□ -1.17
HMGN1-220ENST00000492280 IGFL1Q6UW32 110 aa7.77□□□□□ -1.17
HMGN1-220ENST00000492280 DNAH6Q9C0G6 4158 aa7.76□□□□□ -1.17
HMGN1-220ENST00000492280 DNAH17Q9UFH2 4485 aa7.76□□□□□ -1.17
HMGN1-220ENST00000492280 F8WEM9 126 aa7.76□□□□□ -1.17
HMGN1-220ENST00000492280 K7EQZ3 153 aa7.75□□□□□ -1.17
HMGN1-220ENST00000492280 TMEM258P61165 79 aa7.75□□□□□ -1.17
HMGN1-220ENST00000492280 Q6ZRN7 208 aaPredicted RBP7.75□□□□□ -1.17
HMGN1-220ENST00000492280 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.75□□□□□ -1.17
HMGN1-220ENST00000492280 A0A087WSZ3 146 aa7.74□□□□□ -1.17
HMGN1-220ENST00000492280 H7BZZ5 65 aa7.74□□□□□ -1.17
HMGN1-220ENST00000492280 C9orf163Q8N9P6 203 aa7.74□□□□□ -1.17
HMGN1-220ENST00000492280 FAM30AQ9NZY2 134 aa7.74□□□□□ -1.17
HMGN1-220ENST00000492280 NUPR2A6NF83 97 aa7.73□□□□□ -1.17
HMGN1-220ENST00000492280 UBE2AP49459 152 aa7.73□□□□□ -1.17
HMGN1-220ENST00000492280 DSCR10P59022 87 aa7.73□□□□□ -1.17
HMGN1-220ENST00000492280 J3KT08 172 aa7.72□□□□□ -1.17
HMGN1-220ENST00000492280 RPL37AP61513 92 aaKnown RBP7.72□□□□□ -1.17
HMGN1-220ENST00000492280 SPRR4Q96PI1 79 aa7.72□□□□□ -1.17
HMGN1-220ENST00000492280 C14orf177Q52M58 125 aa7.71□□□□□ -1.18
HMGN1-220ENST00000492280 DNAH11Q96DT5 4516 aa7.7□□□□□ -1.18
HMGN1-220ENST00000492280 OCR1Q9BZK8 76 aa7.69□□□□□ -1.18
HMGN1-220ENST00000492280 FAM236DA0A1B0GTK5 79 aa7.69□□□□□ -1.18
HMGN1-220ENST00000492280 FAM236CP0DP71 79 aa7.69□□□□□ -1.18
HMGN1-220ENST00000492280 TMEM254Q8TBM7 123 aa7.69□□□□□ -1.18
HMGN1-220ENST00000492280 KLKP1Q107X0 134 aa7.68□□□□□ -1.18
HMGN1-220ENST00000492280 WFDC13Q8IUB5 93 aa7.67□□□□□ -1.18
HMGN1-220ENST00000492280 DNAH5Q8TE73 4624 aa7.67□□□□□ -1.18
HMGN1-220ENST00000492280 KRTAP21-3Q3LHN1 58 aa7.66□□□□□ -1.18
HMGN1-220ENST00000492280 HYDINQ4G0P3 5121 aa7.66□□□□□ -1.18
HMGN1-220ENST00000492280 IGLV9-49A0A0B4J1Y8 123 aa7.65□□□□□ -1.18
HMGN1-220ENST00000492280 ANAPC11Q9NYG5 84 aa7.65□□□□□ -1.18
HMGN1-220ENST00000492280 A0A087WTM6 91 aa7.65□□□□□ -1.18
HMGN1-220ENST00000492280 BCE1O60756 84 aa7.65□□□□□ -1.19
HMGN1-220ENST00000492280 HRCT1Q6UXD1 115 aa7.64□□□□□ -1.19
HMGN1-220ENST00000492280 SPACA4Q8TDM5 124 aa7.63□□□□□ -1.19
HMGN1-220ENST00000492280 RTL8CO15255 209 aa7.62□□□□□ -1.19
HMGN1-220ENST00000492280 IGLV8-61A0A075B6I0 122 aa7.59□□□□□ -1.19
HMGN1-220ENST00000492280 A0A0U1RQV1 116 aa7.59□□□□□ -1.19
HMGN1-220ENST00000492280 HCG22E2RYF7 251 aa7.59□□□□□ -1.19
HMGN1-220ENST00000492280 KRTAP13-1Q8IUC0 172 aa7.59□□□□□ -1.19
HMGN1-220ENST00000492280 C4orf26Q17RF5 130 aa7.59□□□□□ -1.19
HMGN1-220ENST00000492280 ALMS1Q8TCU4 4167 aa7.59□□□□□ -1.19
HMGN1-220ENST00000492280 LY6G6CO95867 125 aa7.58□□□□□ -1.2
HMGN1-220ENST00000492280 A0A1B0GW54 56 aa7.58□□□□□ -1.2
HMGN1-220ENST00000492280 RPS28P62857 69 aaKnown RBP7.58□□□□□ -1.2
HMGN1-220ENST00000492280 LINC00474Q9P2X8 69 aa7.58□□□□□ -1.2
HMGN1-220ENST00000492280 PSORS1C2Q9UIG4 136 aa7.58□□□□□ -1.2
HMGN1-220ENST00000492280 H0Y9J4 135 aa7.57□□□□□ -1.2
HMGN1-220ENST00000492280 PRR4Q16378 134 aa7.57□□□□□ -1.2
HMGN1-220ENST00000492280 SPRR1BP22528 89 aa7.56□□□□□ -1.2
HMGN1-220ENST00000492280 Q6ZR54 194 aa7.55□□□□□ -1.2
HMGN1-220ENST00000492280 LRP1BQ9NZR2 4599 aa7.55□□□□□ -1.2
HMGN1-220ENST00000492280 Q5XG85 94 aa7.55□□□□□ -1.2
HMGN1-220ENST00000492280 IGLV5-52A0A0A0MRZ9 124 aa7.54□□□□□ -1.2
HMGN1-220ENST00000492280 FAM229BQ4G0N7 80 aa7.53□□□□□ -1.2
HMGN1-220ENST00000492280 MOBPQ13875 183 aa7.53□□□□□ -1.2
HMGN1-220ENST00000492280 LINC00472Q9H8W2 130 aa7.52□□□□□ -1.21
HMGN1-220ENST00000492280 C1orf134Q5TEV5 83 aa7.51□□□□□ -1.21
HMGN1-220ENST00000492280 SERP1Q9Y6X1 66 aa7.51□□□□□ -1.21
HMGN1-220ENST00000492280 FAT2Q9NYQ8 4349 aa7.5□□□□□ -1.21
HMGN1-220ENST00000492280 NDUFC1O43677 76 aa7.5□□□□□ -1.21
HMGN1-220ENST00000492280 PKIGQ9Y2B9 76 aa7.5□□□□□ -1.21
HMGN1-220ENST00000492280 KRTAP10-2P60368 255 aa7.49□□□□□ -1.21
HMGN1-220ENST00000492280 CASC2Q6XLA1 102 aa7.49□□□□□ -1.21
HMGN1-220ENST00000492280 PRR15Q8IV56 129 aa7.49□□□□□ -1.21
HMGN1-220ENST00000492280 PKD1P98161 4303 aa7.49□□□□□ -1.21
HMGN1-220ENST00000492280 FP248Q71RG6 208 aaPredicted RBP7.48□□□□□ -1.21
HMGN1-220ENST00000492280 PKHD1P08F94 4074 aa7.48□□□□□ -1.21
HMGN1-220ENST00000492280 WWC2-AS2Q96NR7 200 aa7.48□□□□□ -1.21
HMGN1-220ENST00000492280 A8MWP4 228 aa7.47□□□□□ -1.21
HMGN1-220ENST00000492280 KRTAP29-1A8MX34 341 aaPredicted RBP7.47□□□□□ -1.21
HMGN1-220ENST00000492280 LCE6AA0A183 80 aa7.46□□□□□ -1.21
HMGN1-220ENST00000492280 LINC00208Q96KT6 92 aa7.46□□□□□ -1.21
HMGN1-220ENST00000492280 PLAC8Q9NZF1 115 aa7.46□□□□□ -1.21
HMGN1-220ENST00000492280 Q96NJ1 140 aa7.46□□□□□ -1.22
HMGN1-220ENST00000492280 MPLKIPQ8TAP9 179 aa7.45□□□□□ -1.22
HMGN1-220ENST00000492280 ZCCHC13Q8WW36 166 aaKnown RBP7.45□□□□□ -1.22
HMGN1-220ENST00000492280 VPS13BQ7Z7G8 4022 aa7.45□□□□□ -1.22
HMGN1-220ENST00000492280 ZNF861PO60384 105 aa7.44□□□□□ -1.22
HMGN1-220ENST00000492280 MMP24-AS1A0A0U1RRL7 71 aa7.43□□□□□ -1.22
HMGN1-220ENST00000492280 SPINK6Q6UWN8 80 aa7.43□□□□□ -1.22
HMGN1-220ENST00000492280 IGHV6-1A0A0B4J1U7 121 aa7.43□□□□□ -1.22
HMGN1-220ENST00000492280 SVIPQ8NHG7 77 aa7.43□□□□□ -1.22
HMGN1-220ENST00000492280 LINC00483Q53H64 154 aa7.42□□□□□ -1.22
HMGN1-220ENST00000492280 A0A087X002 238 aa7.42□□□□□ -1.22
HMGN1-220ENST00000492280 H0Y9P7 68 aa7.42□□□□□ -1.22
HMGN1-220ENST00000492280 NOTCH2NLQ7Z3S9 236 aa7.42□□□□□ -1.22
HMGN1-220ENST00000492280 CIRBP-AS1Q8TBR5 109 aa7.42□□□□□ -1.22
HMGN1-220ENST00000492280 C5orf47Q569G3 176 aa7.41□□□□□ -1.22
HMGN1-220ENST00000492280 hDV103S1A0JD37 113 aa7.39□□□□□ -1.23
HMGN1-220ENST00000492280 SACSQ9NZJ4 4579 aa7.39□□□□□ -1.23
HMGN1-220ENST00000492280 IGLV7-43P04211 117 aa7.39□□□□□ -1.23
HMGN1-220ENST00000492280 MP68P56378 58 aa7.39□□□□□ -1.23
HMGN1-220ENST00000492280 ATP5EP56381 51 aaPredicted RBP7.39□□□□□ -1.23
HMGN1-220ENST00000492280 C1orf64Q8NEQ6 169 aa7.38□□□□□ -1.23
HMGN1-220ENST00000492280 SMIM26A0A096LP01 95 aa7.38□□□□□ -1.23
HMGN1-220ENST00000492280 ZNF706Q9Y5V0 76 aaPredicted RBP7.38□□□□□ -1.23
HMGN1-220ENST00000492280 NDUFS5O43920 106 aa7.37□□□□□ -1.23
HMGN1-220ENST00000492280 NDUFB1O75438 58 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms