RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ZNF815PA8K554 130 aa7.38□□□□□ -1.23
USF1-206ENST00000491629 CFC1BP0CG36 223 aa7.38□□□□□ -1.23
USF1-206ENST00000491629 CFC1P0CG37 223 aa7.38□□□□□ -1.23
USF1-206ENST00000491629 PFN2P35080 140 aa7.37□□□□□ -1.23
USF1-206ENST00000491629 SEC61BP60468 96 aaKnown RBP7.37□□□□□ -1.23
USF1-206ENST00000491629 Q8NBF4 154 aa7.37□□□□□ -1.23
USF1-206ENST00000491629 HIGD2AQ9BW72 106 aa7.37□□□□□ -1.23
USF1-206ENST00000491629 SND1-IT1Q9HBX3 110 aa7.37□□□□□ -1.23
USF1-206ENST00000491629 COX7CP15954 63 aa7.36□□□□□ -1.23
USF1-206ENST00000491629 MT1HP80294 61 aa7.36□□□□□ -1.23
USF1-206ENST00000491629 SCGB1D4Q6XE38 83 aa7.36□□□□□ -1.23
USF1-206ENST00000491629 TMEM258P61165 79 aa7.35□□□□□ -1.23
USF1-206ENST00000491629 PMVKQ15126 192 aa7.35□□□□□ -1.23
USF1-206ENST00000491629 LINC00643Q86TS7 51 aa7.35□□□□□ -1.23
USF1-206ENST00000491629 SCGB3A1Q96QR1 104 aa7.34□□□□□ -1.23
USF1-206ENST00000491629 IGLV5-39A0A0G2JS06 123 aa7.33□□□□□ -1.24
USF1-206ENST00000491629 XP32Q5T750 250 aa7.33□□□□□ -1.24
USF1-206ENST00000491629 GAGE2AQ6NT46 116 aa7.33□□□□□ -1.24
USF1-206ENST00000491629 C11orf86A6NJI1 115 aa7.32□□□□□ -1.24
USF1-206ENST00000491629 ATOX1O00244 68 aa7.32□□□□□ -1.24
USF1-206ENST00000491629 C4orf48Q5BLP8 95 aa7.32□□□□□ -1.24
USF1-206ENST00000491629 FAM236AA0A1B0GUQ0 79 aa7.31□□□□□ -1.24
USF1-206ENST00000491629 FAM236BA0A1B0GV22 79 aa7.31□□□□□ -1.24
USF1-206ENST00000491629 HIST1H4AP62805 103 aaKnown RBP7.31□□□□□ -1.24
USF1-206ENST00000491629 Q8N377 158 aa7.31□□□□□ -1.24
USF1-206ENST00000491629 SPINK1P00995 79 aa7.3□□□□□ -1.24
USF1-206ENST00000491629 LORP23490 312 aaPredicted RBP7.3□□□□□ -1.24
USF1-206ENST00000491629 ZNF625Q96I27 306 aaPredicted RBP7.3□□□□□ -1.24
USF1-206ENST00000491629 TEX49A0A1B0GTD5 131 aa7.29□□□□□ -1.24
USF1-206ENST00000491629 TRACP01848 142 aa7.29□□□□□ -1.24
USF1-206ENST00000491629 COX6CP09669 75 aa7.29□□□□□ -1.24
USF1-206ENST00000491629 KRTAP4-16G5E9R7 235 aaPredicted RBP7.27□□□□□ -1.25
USF1-206ENST00000491629 ZNF22P17026 224 aaPredicted RBP7.27□□□□□ -1.25
USF1-206ENST00000491629 KRTAP10-6P60371 365 aaPredicted RBP7.27□□□□□ -1.25
USF1-206ENST00000491629 COX17Q14061 63 aa7.27□□□□□ -1.25
USF1-206ENST00000491629 LINC00483Q53H64 154 aa7.27□□□□□ -1.25
USF1-206ENST00000491629 SMCR5Q8TEV8 140 aa7.27□□□□□ -1.25
USF1-206ENST00000491629 FLGP20930 4061 aaPredicted RBP7.27□□□□□ -1.25
USF1-206ENST00000491629 TMEM223A0PJW6 202 aa7.26□□□□□ -1.25
USF1-206ENST00000491629 LST1O00453 97 aa7.26□□□□□ -1.25
USF1-206ENST00000491629 LEPROTO15243 131 aa7.26□□□□□ -1.25
USF1-206ENST00000491629 SFTA2Q6UW10 78 aa7.26□□□□□ -1.25
USF1-206ENST00000491629 ZNF706Q9Y5V0 76 aaPredicted RBP7.26□□□□□ -1.25
USF1-206ENST00000491629 SPRR1AP35321 89 aa7.25□□□□□ -1.25
USF1-206ENST00000491629 J3QQQ9 107 aa7.24□□□□□ -1.25
USF1-206ENST00000491629 EIF4EBP3O60516 100 aaPredicted RBP7.24□□□□□ -1.25
USF1-206ENST00000491629 LGALS3P17931 250 aaKnown RBP7.24□□□□□ -1.25
USF1-206ENST00000491629 RPS29P62273 56 aaKnown RBP7.24□□□□□ -1.25
USF1-206ENST00000491629 PRO0628Q9UI54 55 aa7.24□□□□□ -1.25
USF1-206ENST00000491629 TRIAP1O43715 76 aa7.23□□□□□ -1.25
USF1-206ENST00000491629 MOBPQ13875 183 aa7.23□□□□□ -1.25
USF1-206ENST00000491629 PRYO14603 147 aa7.22□□□□□ -1.25
USF1-206ENST00000491629 ERC2-IT1O76042 136 aa7.22□□□□□ -1.25
USF1-206ENST00000491629 Q5XG85 94 aa7.22□□□□□ -1.25
USF1-206ENST00000491629 KCNQ1DNQ9H478 68 aa7.22□□□□□ -1.25
USF1-206ENST00000491629 IGLV9-49A0A0B4J1Y8 123 aa7.21□□□□□ -1.26
USF1-206ENST00000491629 A0A0U1RRA0 63 aa7.21□□□□□ -1.26
USF1-206ENST00000491629 Q1RN00 199 aa7.21□□□□□ -1.26
USF1-206ENST00000491629 MUSTN1Q8IVN3 82 aa7.21□□□□□ -1.26
USF1-206ENST00000491629 SERP2Q8N6R1 65 aa7.21□□□□□ -1.26
USF1-206ENST00000491629 NDUFA12Q9UI09 145 aa7.21□□□□□ -1.26
USF1-206ENST00000491629 A0A0J9YXY3 114 aa7.2□□□□□ -1.26
USF1-206ENST00000491629 TIMM17BO60830 172 aa7.2□□□□□ -1.26
USF1-206ENST00000491629 NDUFC2O95298 119 aa7.2□□□□□ -1.26
USF1-206ENST00000491629 TSPEAR-AS2P59090 65 aa7.2□□□□□ -1.26
USF1-206ENST00000491629 PCOTHQ58A44 107 aa7.2□□□□□ -1.26
USF1-206ENST00000491629 NCR3O14931 201 aa7.19□□□□□ -1.26
USF1-206ENST00000491629 LINC00158P58513 81 aa7.19□□□□□ -1.26
USF1-206ENST00000491629 SSBP3-AS1Q7Z2R9 100 aa7.19□□□□□ -1.26
USF1-206ENST00000491629 Q6JHZ5 121 aa7.18□□□□□ -1.26
USF1-206ENST00000491629 IGLV8-61A0A075B6I0 122 aa7.17□□□□□ -1.26
USF1-206ENST00000491629 TRBV10-3A0A0K0K1G6 114 aa7.17□□□□□ -1.26
USF1-206ENST00000491629 hADV29S1A0JD25 119 aa7.17□□□□□ -1.26
USF1-206ENST00000491629 Q9BRP9 147 aa7.17□□□□□ -1.26
USF1-206ENST00000491629 ETDCA0A1B0GVM5 59 aa7.16□□□□□ -1.26
USF1-206ENST00000491629 HRCT1Q6UXD1 115 aa7.15□□□□□ -1.26
USF1-206ENST00000491629 LITAFQ99732 161 aa7.15□□□□□ -1.26
USF1-206ENST00000491629 KRTAP9-7A8MTY7 169 aa7.14□□□□□ -1.27
USF1-206ENST00000491629 C4orf26Q17RF5 130 aa7.14□□□□□ -1.27
USF1-206ENST00000491629 COPS9Q8WXC6 57 aa7.14□□□□□ -1.27
USF1-206ENST00000491629 SERP1Q9Y6X1 66 aa7.14□□□□□ -1.27
USF1-206ENST00000491629 H7C2G1 150 aa7.13□□□□□ -1.27
USF1-206ENST00000491629 C9orf92A6NGG3 77 aa7.12□□□□□ -1.27
USF1-206ENST00000491629 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.12□□□□□ -1.27
USF1-206ENST00000491629 MIR7-3HGQ8N6C7 128 aa7.12□□□□□ -1.27
USF1-206ENST00000491629 NPC2P61916 151 aa7.11□□□□□ -1.27
USF1-206ENST00000491629 Q6ZRX8 168 aa7.1□□□□□ -1.27
USF1-206ENST00000491629 ATP5EP2Q5VTU8 51 aa7.09□□□□□ -1.27
USF1-206ENST00000491629 CLEC2BQ92478 149 aa7.09□□□□□ -1.27
USF1-206ENST00000491629 SMIM26A0A096LP01 95 aa7.08□□□□□ -1.28
USF1-206ENST00000491629 SSPOA2VEC9 5147 aa7.08□□□□□ -1.28
USF1-206ENST00000491629 M0R2T5 61 aa7.07□□□□□ -1.28
USF1-206ENST00000491629 SEC61GP60059 68 aa7.07□□□□□ -1.28
USF1-206ENST00000491629 S100A7L2Q5SY68 101 aa7.07□□□□□ -1.28
USF1-206ENST00000491629 ST20-AS1Q8NBB2 130 aa7.07□□□□□ -1.28
USF1-206ENST00000491629 DSCR8Q96T75 97 aa7.07□□□□□ -1.28
USF1-206ENST00000491629 FAM236DA0A1B0GTK5 79 aa7.06□□□□□ -1.28
USF1-206ENST00000491629 BAALC-AS2P0C853 105 aa7.06□□□□□ -1.28
USF1-206ENST00000491629 FAM236CP0DP71 79 aa7.06□□□□□ -1.28
USF1-206ENST00000491629 ATP5EP56381 51 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms