RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 IGLV5-37A0A075B6J1 123 aa14.39□□□□□ -0.11
USF3-203ENST00000491165 RPL37AP8A6NKH3 93 aa14.38□□□□□ -0.11
USF3-203ENST00000491165 IGLV5-52A0A0A0MRZ9 124 aa14.38□□□□□ -0.11
USF3-203ENST00000491165 LRP1BQ9NZR2 4599 aa14.37□□□□□ -0.11
USF3-203ENST00000491165 IGLV1-50A0A075B6I6 118 aa14.37□□□□□ -0.11
USF3-203ENST00000491165 FAM168BA1KXE4 195 aa14.37□□□□□ -0.11
USF3-203ENST00000491165 KRTAP4-16G5E9R7 235 aaPredicted RBP14.36□□□□□ -0.11
USF3-203ENST00000491165 ETDCA0A1B0GVM5 59 aa14.36□□□□□ -0.11
USF3-203ENST00000491165 SNURFQ9Y675 71 aa14.36□□□□□ -0.11
USF3-203ENST00000491165 IGKV4-1P06312 121 aa14.35□□□□□ -0.11
USF3-203ENST00000491165 Q9BRP9 147 aa14.35□□□□□ -0.11
USF3-203ENST00000491165 BPY2O14599 106 aa14.35□□□□□ -0.11
USF3-203ENST00000491165 SPRR1AP35321 89 aa14.35□□□□□ -0.11
USF3-203ENST00000491165 Q8N9L7 120 aa14.35□□□□□ -0.11
USF3-203ENST00000491165 DNAH8Q96JB1 4490 aa14.34□□□□□ -0.11
USF3-203ENST00000491165 DYNC1H1Q14204 4646 aaKnown RBP14.33□□□□□ -0.12
USF3-203ENST00000491165 A0A096LNI7 61 aa14.32□□□□□ -0.12
USF3-203ENST00000491165 PANO1I0J062 215 aa14.31□□□□□ -0.12
USF3-203ENST00000491165 A0A1B0GW54 56 aa14.3□□□□□ -0.12
USF3-203ENST00000491165 CHTF8P0CG12 524 aa14.3□□□□□ -0.12
USF3-203ENST00000491165 EPPK1P58107 5090 aaKnown RBP14.3□□□□□ -0.12
USF3-203ENST00000491165 KRTAP7-1Q8IUC3 87 aa14.3□□□□□ -0.12
USF3-203ENST00000491165 IGKV2-24A0A0C4DH68 120 aa14.29□□□□□ -0.12
USF3-203ENST00000491165 NDUFC1O43677 76 aa14.28□□□□□ -0.12
USF3-203ENST00000491165 MRPL55Q7Z7F7 128 aaKnown RBP14.28□□□□□ -0.12
USF3-203ENST00000491165 F8WEM9 126 aa14.27□□□□□ -0.12
USF3-203ENST00000491165 ST20-AS1Q8NBB2 130 aa14.27□□□□□ -0.13
USF3-203ENST00000491165 ERC2-IT1O76042 136 aa14.26□□□□□ -0.13
USF3-203ENST00000491165 C1orf137Q5JT78 98 aa14.26□□□□□ -0.13
USF3-203ENST00000491165 SERP1Q9Y6X1 66 aa14.26□□□□□ -0.13
USF3-203ENST00000491165 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.26□□□□□ -0.13
USF3-203ENST00000491165 A0A1W2PNM2 257 aa14.26□□□□□ -0.13
USF3-203ENST00000491165 KRTAP10-1P60331 282 aa14.26□□□□□ -0.13
USF3-203ENST00000491165 C16orf90A8MZG2 172 aa14.25□□□□□ -0.13
USF3-203ENST00000491165 TMEM254Q8TBM7 123 aa14.23□□□□□ -0.13
USF3-203ENST00000491165 FAM30AQ9NZY2 134 aa14.23□□□□□ -0.13
USF3-203ENST00000491165 Q8NBF4 154 aa14.22□□□□□ -0.13
USF3-203ENST00000491165 OCR1Q9BZK8 76 aa14.22□□□□□ -0.13
USF3-203ENST00000491165 EPM2AB3EWF7 344 aa14.21□□□□□ -0.13
USF3-203ENST00000491165 UBE2BP63146 152 aa14.21□□□□□ -0.13
USF3-203ENST00000491165 C5orf47Q569G3 176 aa14.21□□□□□ -0.13
USF3-203ENST00000491165 Q5XG85 94 aa14.21□□□□□ -0.13
USF3-203ENST00000491165 REG3GQ6UW15 175 aa14.19□□□□□ -0.14
USF3-203ENST00000491165 APOBP04114 4563 aaKnown RBP14.19□□□□□ -0.14
USF3-203ENST00000491165 SPACA4Q8TDM5 124 aa14.18□□□□□ -0.14
USF3-203ENST00000491165 SPRR4Q96PI1 79 aa14.18□□□□□ -0.14
USF3-203ENST00000491165 A0A1W2PNN7 141 aa14.17□□□□□ -0.14
USF3-203ENST00000491165 ATP5EP56381 51 aaPredicted RBP14.15□□□□□ -0.14
USF3-203ENST00000491165 C4orf26Q17RF5 130 aa14.15□□□□□ -0.14
USF3-203ENST00000491165 Q6ZSA8 131 aa14.14□□□□□ -0.15
USF3-203ENST00000491165 A0A0U1RQV1 116 aa14.12□□□□□ -0.15
USF3-203ENST00000491165 PKIGQ9Y2B9 76 aa14.11□□□□□ -0.15
USF3-203ENST00000491165 SMIM29Q86T20 159 aa14.11□□□□□ -0.15
USF3-203ENST00000491165 LINC00474Q9P2X8 69 aa14.11□□□□□ -0.15
USF3-203ENST00000491165 HRCT1Q6UXD1 115 aa14.08□□□□□ -0.16
USF3-203ENST00000491165 CIRBP-AS1Q8TBR5 109 aa14.07□□□□□ -0.16
USF3-203ENST00000491165 DSCR10P59022 87 aa14.06□□□□□ -0.16
USF3-203ENST00000491165 PLAC8Q9NZF1 115 aa14.04□□□□□ -0.16
USF3-203ENST00000491165 PHF5AQ7RTV0 110 aaKnown RBP14.03□□□□□ -0.16
USF3-203ENST00000491165 HIGD2AQ9BW72 106 aa14.03□□□□□ -0.16
USF3-203ENST00000491165 SMIM26A0A096LP01 95 aa14.03□□□□□ -0.16
USF3-203ENST00000491165 PRLHP81277 87 aa14.02□□□□□ -0.16
USF3-203ENST00000491165 K7EQZ3 153 aa14.02□□□□□ -0.17
USF3-203ENST00000491165 IGFL1Q6UW32 110 aa14.01□□□□□ -0.17
USF3-203ENST00000491165 KRTAP11-1Q8IUC1 163 aa14.01□□□□□ -0.17
USF3-203ENST00000491165 HSPG2P98160 4391 aa14□□□□□ -0.17
USF3-203ENST00000491165 VPS13BQ7Z7G8 4022 aa13.99□□□□□ -0.17
USF3-203ENST00000491165 FAT1Q14517 4588 aa13.99□□□□□ -0.17
USF3-203ENST00000491165 IGLV8-61A0A075B6I0 122 aa13.97□□□□□ -0.17
USF3-203ENST00000491165 A0A0G2JQZ4 141 aa13.97□□□□□ -0.17
USF3-203ENST00000491165 KIAA1109Q2LD37 5005 aa13.96□□□□□ -0.17
USF3-203ENST00000491165 FP248Q71RG6 208 aaPredicted RBP13.96□□□□□ -0.18
USF3-203ENST00000491165 HCG22E2RYF7 251 aa13.93□□□□□ -0.18
USF3-203ENST00000491165 RYR1P21817 5038 aa13.91□□□□□ -0.18
USF3-203ENST00000491165 UBE2AP49459 152 aa13.91□□□□□ -0.18
USF3-203ENST00000491165 A0A087WSZ3 146 aa13.9□□□□□ -0.18
USF3-203ENST00000491165 DEFB116Q30KQ4 102 aa13.87□□□□□ -0.19
USF3-203ENST00000491165 SMR3BP02814 79 aaPredicted RBP13.86□□□□□ -0.19
USF3-203ENST00000491165 H0Y9J4 135 aa13.85□□□□□ -0.19
USF3-203ENST00000491165 ZCCHC13Q8WW36 166 aaKnown RBP13.85□□□□□ -0.19
USF3-203ENST00000491165 SRRM2Q9UQ35 2752 aaKnown RBP13.85□□□□□ -0.19
USF3-203ENST00000491165 SPRR1BP22528 89 aa13.83□□□□□ -0.2
USF3-203ENST00000491165 PSORS1C2Q9UIG4 136 aa13.83□□□□□ -0.2
USF3-203ENST00000491165 FAM229BQ4G0N7 80 aa13.82□□□□□ -0.2
USF3-203ENST00000491165 CDK2AP2O75956 126 aa13.81□□□□□ -0.2
USF3-203ENST00000491165 KRTAP17-1Q9BYP8 105 aa13.8□□□□□ -0.2
USF3-203ENST00000491165 WFDC13Q8IUB5 93 aa13.79□□□□□ -0.2
USF3-203ENST00000491165 BIRC6Q9NR09 4857 aa13.78□□□□□ -0.2
USF3-203ENST00000491165 RPL37AP61513 92 aaKnown RBP13.76□□□□□ -0.21
USF3-203ENST00000491165 hDV103S1A0JD37 113 aa13.72□□□□□ -0.21
USF3-203ENST00000491165 KRTAP29-1A8MX34 341 aaPredicted RBP13.72□□□□□ -0.21
USF3-203ENST00000491165 MPLKIPQ8TAP9 179 aa13.71□□□□□ -0.21
USF3-203ENST00000491165 MP68P56378 58 aa13.7□□□□□ -0.22
USF3-203ENST00000491165 PRR15Q8IV56 129 aa13.7□□□□□ -0.22
USF3-203ENST00000491165 KRTAP10-4P60372 401 aaPredicted RBP13.69□□□□□ -0.22
USF3-203ENST00000491165 LINC00472Q9H8W2 130 aa13.69□□□□□ -0.22
USF3-203ENST00000491165 A8MWP4 228 aa13.68□□□□□ -0.22
USF3-203ENST00000491165 NDUFB1O75438 58 aa13.68□□□□□ -0.22
USF3-203ENST00000491165 KRTAP13-1Q8IUC0 172 aa13.68□□□□□ -0.22
USF3-203ENST00000491165 CASC2Q6XLA1 102 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms