RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 SPTSSBQ8NFR3 76 aa6.49□□□□□ -1.37
HDAC9-225ENST00000490851 WWC2-AS2Q96NR7 200 aa6.49□□□□□ -1.37
HDAC9-225ENST00000490851 TLX1NBP0CAT3 122 aa6.48□□□□□ -1.37
HDAC9-225ENST00000490851 Q6ZRN7 208 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-225ENST00000490851 FAM30AQ9NZY2 134 aa6.48□□□□□ -1.37
HDAC9-225ENST00000490851 NOTCH2NLQ7Z3S9 236 aa6.48□□□□□ -1.37
HDAC9-225ENST00000490851 TMEM254Q8TBM7 123 aa6.48□□□□□ -1.37
HDAC9-225ENST00000490851 LRCOL1A6NCL2 159 aa6.47□□□□□ -1.37
HDAC9-225ENST00000490851 C14orf177Q52M58 125 aa6.47□□□□□ -1.37
HDAC9-225ENST00000490851 RPL37AP8A6NKH3 93 aa6.47□□□□□ -1.37
HDAC9-225ENST00000490851 C3orf84H3BNL1 204 aa6.47□□□□□ -1.37
HDAC9-225ENST00000490851 ASB16-AS1Q495Z4 193 aa6.47□□□□□ -1.37
HDAC9-225ENST00000490851 DNAH2Q9P225 4427 aa6.46□□□□□ -1.37
HDAC9-225ENST00000490851 A0A096LNI7 61 aa6.46□□□□□ -1.38
HDAC9-225ENST00000490851 A8MU10 97 aa6.46□□□□□ -1.38
HDAC9-225ENST00000490851 CNBPP62633 177 aaKnown RBP6.46□□□□□ -1.38
HDAC9-225ENST00000490851 C7orf33Q8WU49 177 aa6.46□□□□□ -1.38
HDAC9-225ENST00000490851 A0A087X002 238 aa6.45□□□□□ -1.38
HDAC9-225ENST00000490851 PLA2G1BP04054 148 aaKnown RBP6.45□□□□□ -1.38
HDAC9-225ENST00000490851 CHTF8P0CG12 524 aa6.45□□□□□ -1.38
HDAC9-225ENST00000490851 KRTAP7-1Q8IUC3 87 aa6.45□□□□□ -1.38
HDAC9-225ENST00000490851 Q6ZR54 194 aa6.44□□□□□ -1.38
HDAC9-225ENST00000490851 SCXQ7RTU7 201 aa6.44□□□□□ -1.38
HDAC9-225ENST00000490851 CDC42SE1Q9NRR8 79 aa6.44□□□□□ -1.38
HDAC9-225ENST00000490851 Q8N814 137 aa6.44□□□□□ -1.38
HDAC9-225ENST00000490851 LIMD2Q9BT23 127 aa6.44□□□□□ -1.38
HDAC9-225ENST00000490851 LINC00476Q8WZB0 136 aa6.43□□□□□ -1.38
HDAC9-225ENST00000490851 COX7BP24311 80 aa6.42□□□□□ -1.38
HDAC9-225ENST00000490851 LINC00575Q6W349 94 aa6.42□□□□□ -1.38
HDAC9-225ENST00000490851 A0A087WTM6 91 aa6.42□□□□□ -1.38
HDAC9-225ENST00000490851 CHKB-CPT1BH3BT56 60 aa6.42□□□□□ -1.38
HDAC9-225ENST00000490851 C1orf134Q5TEV5 83 aa6.42□□□□□ -1.38
HDAC9-225ENST00000490851 LINC00167Q96N53 147 aa6.42□□□□□ -1.38
HDAC9-225ENST00000490851 ORMDL1Q9P0S3 153 aa6.41□□□□□ -1.38
HDAC9-225ENST00000490851 A0A1W2PNN7 141 aa6.41□□□□□ -1.38
HDAC9-225ENST00000490851 PLA2G2DQ9UNK4 145 aa6.41□□□□□ -1.38
HDAC9-225ENST00000490851 C9orf163Q8N9P6 203 aa6.4□□□□□ -1.38
HDAC9-225ENST00000490851 C14orf132Q9NPU4 83 aa6.4□□□□□ -1.38
HDAC9-225ENST00000490851 ELOF1P60002 83 aaKnown RBP6.4□□□□□ -1.39
HDAC9-225ENST00000490851 HECTD4Q9Y4D8 3996 aa6.4□□□□□ -1.39
HDAC9-225ENST00000490851 Q6ZQY7 126 aa6.39□□□□□ -1.39
HDAC9-225ENST00000490851 C1orf64Q8NEQ6 169 aa6.39□□□□□ -1.39
HDAC9-225ENST00000490851 UBL5Q9BZL1 73 aa6.39□□□□□ -1.39
HDAC9-225ENST00000490851 IGLV1-50A0A075B6I6 118 aa6.39□□□□□ -1.39
HDAC9-225ENST00000490851 IGLV5-37A0A075B6J1 123 aa6.39□□□□□ -1.39
HDAC9-225ENST00000490851 KCNQ1DNQ9H478 68 aa6.39□□□□□ -1.39
HDAC9-225ENST00000490851 ALMS1Q8TCU4 4167 aa6.38□□□□□ -1.39
HDAC9-225ENST00000490851 PANO1I0J062 215 aa6.38□□□□□ -1.39
HDAC9-225ENST00000490851 NREPQ16612 68 aa6.38□□□□□ -1.39
HDAC9-225ENST00000490851 ETDCA0A1B0GVM5 59 aa6.37□□□□□ -1.39
HDAC9-225ENST00000490851 RTL8CO15255 209 aa6.37□□□□□ -1.39
HDAC9-225ENST00000490851 MOBPQ13875 183 aa6.37□□□□□ -1.39
HDAC9-225ENST00000490851 LINC00528Q8N1L1 170 aa6.37□□□□□ -1.39
HDAC9-225ENST00000490851 TNP2Q05952 138 aa6.36□□□□□ -1.39
HDAC9-225ENST00000490851 HYDINQ4G0P3 5121 aa6.36□□□□□ -1.39
HDAC9-225ENST00000490851 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.35□□□□□ -1.39
HDAC9-225ENST00000490851 SRRM2Q9UQ35 2752 aaKnown RBP6.34□□□□□ -1.39
HDAC9-225ENST00000490851 IGLV5-52A0A0A0MRZ9 124 aa6.34□□□□□ -1.39
HDAC9-225ENST00000490851 REG3GQ6UW15 175 aa6.34□□□□□ -1.39
HDAC9-225ENST00000490851 DNAH6Q9C0G6 4158 aa6.34□□□□□ -1.39
HDAC9-225ENST00000490851 DNAH17Q9UFH2 4485 aa6.34□□□□□ -1.39
HDAC9-225ENST00000490851 LOC101927531A0A1B0GV80 90 aa6.34□□□□□ -1.4
HDAC9-225ENST00000490851 DEFB105AQ8NG35 78 aa6.34□□□□□ -1.4
HDAC9-225ENST00000490851 Q6ZRX8 168 aa6.33□□□□□ -1.4
HDAC9-225ENST00000490851 KRTAP11-1Q8IUC1 163 aa6.33□□□□□ -1.4
HDAC9-225ENST00000490851 KRTAP4-16G5E9R7 235 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-225ENST00000490851 JMJD7-PLA2G4BH0Y9G9 81 aa6.33□□□□□ -1.4
HDAC9-225ENST00000490851 Q9BRP9 147 aa6.33□□□□□ -1.4
HDAC9-225ENST00000490851 FRAS1Q86XX4 4008 aa6.32□□□□□ -1.4
HDAC9-225ENST00000490851 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.32□□□□□ -1.4
HDAC9-225ENST00000490851 RETNLBQ9BQ08 111 aa6.32□□□□□ -1.4
HDAC9-225ENST00000490851 SPRR1AP35321 89 aa6.31□□□□□ -1.4
HDAC9-225ENST00000490851 PRLHP81277 87 aa6.31□□□□□ -1.4
HDAC9-225ENST00000490851 SPACA4Q8TDM5 124 aa6.31□□□□□ -1.4
HDAC9-225ENST00000490851 A6NED7 52 aa6.31□□□□□ -1.4
HDAC9-225ENST00000490851 ST20-AS1Q8NBB2 130 aa6.3□□□□□ -1.4
HDAC9-225ENST00000490851 KRTAP10-2P60368 255 aa6.29□□□□□ -1.4
HDAC9-225ENST00000490851 Q8N9P0 234 aaPredicted RBP6.29□□□□□ -1.4
HDAC9-225ENST00000490851 DHRS4-AS1Q9P1J3 65 aa6.29□□□□□ -1.4
HDAC9-225ENST00000490851 HIGD2AQ9BW72 106 aa6.29□□□□□ -1.4
HDAC9-225ENST00000490851 LINC01547P58512 204 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-225ENST00000490851 CASC2Q6XLA1 102 aa6.28□□□□□ -1.4
HDAC9-225ENST00000490851 PRAC1Q96KF2 57 aa6.28□□□□□ -1.4
HDAC9-225ENST00000490851 A0A1B0GW54 56 aa6.27□□□□□ -1.41
HDAC9-225ENST00000490851 DNAH11Q96DT5 4516 aa6.27□□□□□ -1.41
HDAC9-225ENST00000490851 PRR15LQ9BU68 103 aa6.27□□□□□ -1.41
HDAC9-225ENST00000490851 OCR1Q9BZK8 76 aa6.27□□□□□ -1.41
HDAC9-225ENST00000490851 SACSQ9NZJ4 4579 aa6.26□□□□□ -1.41
HDAC9-225ENST00000490851 FAT2Q9NYQ8 4349 aa6.26□□□□□ -1.41
HDAC9-225ENST00000490851 BPY2O14599 106 aa6.26□□□□□ -1.41
HDAC9-225ENST00000490851 LCE6AA0A183 80 aa6.26□□□□□ -1.41
HDAC9-225ENST00000490851 Q8N377 158 aa6.26□□□□□ -1.41
HDAC9-225ENST00000490851 DNAH5Q8TE73 4624 aa6.25□□□□□ -1.41
HDAC9-225ENST00000490851 HAMPP81172 84 aa6.25□□□□□ -1.41
HDAC9-225ENST00000490851 H3BQ85 93 aa6.24□□□□□ -1.41
HDAC9-225ENST00000490851 J3QL48 77 aa6.24□□□□□ -1.41
HDAC9-225ENST00000490851 PKD1P98161 4303 aa6.24□□□□□ -1.41
HDAC9-225ENST00000490851 SEC61BP60468 96 aaKnown RBP6.24□□□□□ -1.41
HDAC9-225ENST00000490851 DNAH8Q96JB1 4490 aa6.23□□□□□ -1.41
HDAC9-225ENST00000490851 Q6ZQT0 140 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms