RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 SDIM1Q6ZPB5 146 aa4.07□□□□□ -1.76
SF3A3-208ENST00000489537 FAM19A5Q7Z5A7 132 aaPredicted RBP4.07□□□□□ -1.76
SF3A3-208ENST00000489537 C14orf132Q9NPU4 83 aa4.07□□□□□ -1.76
SF3A3-208ENST00000489537 PKD1P98161 4303 aa4.06□□□□□ -1.76
SF3A3-208ENST00000489537 A0A087WTM6 91 aa4.06□□□□□ -1.76
SF3A3-208ENST00000489537 A0A096LNI7 61 aa4.06□□□□□ -1.76
SF3A3-208ENST00000489537 F8WEM9 126 aa4.06□□□□□ -1.76
SF3A3-208ENST00000489537 KRTAP4-16G5E9R7 235 aaPredicted RBP4.06□□□□□ -1.76
SF3A3-208ENST00000489537 PCP4P48539 62 aa4.06□□□□□ -1.76
SF3A3-208ENST00000489537 UBE2BP63146 152 aa4.06□□□□□ -1.76
SF3A3-208ENST00000489537 DPH3Q96FX2 82 aa4.06□□□□□ -1.76
SF3A3-208ENST00000489537 IGLV5-48A0A075B6I7 105 aa4.05□□□□□ -1.76
SF3A3-208ENST00000489537 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.05□□□□□ -1.76
SF3A3-208ENST00000489537 IGKV2-24A0A0C4DH68 120 aa4.05□□□□□ -1.76
SF3A3-208ENST00000489537 TRBV7-7A0A0K0K1E9 115 aa4.05□□□□□ -1.76
SF3A3-208ENST00000489537 FUSP35637 526 aaKnown RBP eCLIP4.05□□□□□ -1.76
SF3A3-208ENST00000489537 XGP55808 180 aa4.05□□□□□ -1.76
SF3A3-208ENST00000489537 Q6JHZ5 121 aa4.05□□□□□ -1.76
SF3A3-208ENST00000489537 Q6ZQT0 140 aa4.05□□□□□ -1.76
SF3A3-208ENST00000489537 LINC00476Q8WZB0 136 aa4.05□□□□□ -1.76
SF3A3-208ENST00000489537 ABCA13Q86UQ4 5058 aa4.04□□□□□ -1.76
SF3A3-208ENST00000489537 TRBV7-4A0A0J9YYF1 115 aa4.04□□□□□ -1.76
SF3A3-208ENST00000489537 A0A1B0GV72 72 aa4.04□□□□□ -1.76
SF3A3-208ENST00000489537 EPM2AB3EWF7 344 aa4.04□□□□□ -1.76
SF3A3-208ENST00000489537 LY6G6CO95867 125 aa4.04□□□□□ -1.76
SF3A3-208ENST00000489537 ZNF706Q9Y5V0 76 aaPredicted RBP4.04□□□□□ -1.76
SF3A3-208ENST00000489537 HSPG2P98160 4391 aa4.03□□□□□ -1.76
SF3A3-208ENST00000489537 IGLV5-52A0A0A0MRZ9 124 aa4.03□□□□□ -1.76
SF3A3-208ENST00000489537 RTL8CO15255 209 aa4.03□□□□□ -1.76
SF3A3-208ENST00000489537 MT-ATP8P03928 68 aa4.03□□□□□ -1.76
SF3A3-208ENST00000489537 RPL37AP61513 92 aaKnown RBP4.03□□□□□ -1.76
SF3A3-208ENST00000489537 FAM19A1Q7Z5A9 133 aa4.03□□□□□ -1.76
SF3A3-208ENST00000489537 LRP1BQ9NZR2 4599 aa4.03□□□□□ -1.76
SF3A3-208ENST00000489537 FAM168BA1KXE4 195 aa4.02□□□□□ -1.77
SF3A3-208ENST00000489537 M0R2N4 97 aa4.02□□□□□ -1.77
SF3A3-208ENST00000489537 UBE2AP49459 152 aa4.02□□□□□ -1.77
SF3A3-208ENST00000489537 SPACA4Q8TDM5 124 aa4.02□□□□□ -1.77
SF3A3-208ENST00000489537 BCE1O60756 84 aa4.01□□□□□ -1.77
SF3A3-208ENST00000489537 CXCL6P80162 114 aa4.01□□□□□ -1.77
SF3A3-208ENST00000489537 DNAH5Q8TE73 4624 aa4.01□□□□□ -1.77
SF3A3-208ENST00000489537 APOBP04114 4563 aaKnown RBP4□□□□□ -1.77
SF3A3-208ENST00000489537 A0A1W2PNN7 141 aa4□□□□□ -1.77
SF3A3-208ENST00000489537 SPRR1BP22528 89 aa4□□□□□ -1.77
SF3A3-208ENST00000489537 Q8N377 158 aa4□□□□□ -1.77
SF3A3-208ENST00000489537 SMIM20Q8N5G0 67 aa4□□□□□ -1.77
SF3A3-208ENST00000489537 LINC00846Q9NV44 126 aa4□□□□□ -1.77
SF3A3-208ENST00000489537 PLAC8Q9NZF1 115 aa4□□□□□ -1.77
SF3A3-208ENST00000489537 IGLV8-61A0A075B6I0 122 aa3.99□□□□□ -1.77
SF3A3-208ENST00000489537 NREPQ16612 68 aa3.99□□□□□ -1.77
SF3A3-208ENST00000489537 C1orf137Q5JT78 98 aa3.99□□□□□ -1.77
SF3A3-208ENST00000489537 LINC00336Q6ZUF6 198 aa3.99□□□□□ -1.77
SF3A3-208ENST00000489537 KRTAP7-1Q8IUC3 87 aa3.99□□□□□ -1.77
SF3A3-208ENST00000489537 DEFB105AQ8NG35 78 aa3.99□□□□□ -1.77
SF3A3-208ENST00000489537 Q9BRP9 147 aa3.99□□□□□ -1.77
SF3A3-208ENST00000489537 ANAPC13Q9BS18 74 aa3.99□□□□□ -1.77
SF3A3-208ENST00000489537 ATOX1O00244 68 aa3.98□□□□□ -1.77
SF3A3-208ENST00000489537 SMCR5Q8TEV8 140 aa3.98□□□□□ -1.77
SF3A3-208ENST00000489537 HIGD2AQ9BW72 106 aa3.98□□□□□ -1.77
SF3A3-208ENST00000489537 LINC01547P58512 204 aaPredicted RBP3.97□□□□□ -1.77
SF3A3-208ENST00000489537 PHF5AQ7RTV0 110 aaKnown RBP3.97□□□□□ -1.77
SF3A3-208ENST00000489537 Q8NBF4 154 aa3.97□□□□□ -1.77
SF3A3-208ENST00000489537 SVIPQ8NHG7 77 aa3.97□□□□□ -1.77
SF3A3-208ENST00000489537 SPRR4Q96PI1 79 aa3.97□□□□□ -1.77
SF3A3-208ENST00000489537 CHTF8P0CG12 524 aa3.96□□□□□ -1.78
SF3A3-208ENST00000489537 HAMPP81172 84 aa3.96□□□□□ -1.78
SF3A3-208ENST00000489537 Q6ZVQ6 151 aa3.96□□□□□ -1.78
SF3A3-208ENST00000489537 A0A1B0GVY2 172 aa3.95□□□□□ -1.78
SF3A3-208ENST00000489537 ZNF861PO60384 105 aa3.95□□□□□ -1.78
SF3A3-208ENST00000489537 CRYGAP11844 174 aa3.95□□□□□ -1.78
SF3A3-208ENST00000489537 HIST1H4AP62805 103 aaKnown RBP3.95□□□□□ -1.78
SF3A3-208ENST00000489537 PRLHP81277 87 aa3.95□□□□□ -1.78
SF3A3-208ENST00000489537 FAT1Q14517 4588 aa3.94□□□□□ -1.78
SF3A3-208ENST00000489537 FAM236AA0A1B0GUQ0 79 aa3.94□□□□□ -1.78
SF3A3-208ENST00000489537 FAM236BA0A1B0GV22 79 aa3.94□□□□□ -1.78
SF3A3-208ENST00000489537 BPY2O14599 106 aa3.94□□□□□ -1.78
SF3A3-208ENST00000489537 KRTAP13-1Q8IUC0 172 aa3.94□□□□□ -1.78
SF3A3-208ENST00000489537 SS18L2Q9UHA2 77 aa3.94□□□□□ -1.78
SF3A3-208ENST00000489537 ERC2-IT1O76042 136 aa3.93□□□□□ -1.78
SF3A3-208ENST00000489537 LINC00483Q53H64 154 aa3.93□□□□□ -1.78
SF3A3-208ENST00000489537 ST20-AS1Q8NBB2 130 aa3.93□□□□□ -1.78
SF3A3-208ENST00000489537 IGKV3D-7A0A0C4DH55 119 aa3.92□□□□□ -1.78
SF3A3-208ENST00000489537 J3KT08 172 aa3.92□□□□□ -1.78
SF3A3-208ENST00000489537 UQCRQO14949 82 aa3.92□□□□□ -1.78
SF3A3-208ENST00000489537 SMIM29Q86T20 159 aa3.92□□□□□ -1.78
SF3A3-208ENST00000489537 IGFL1Q6UW32 110 aa3.91□□□□□ -1.78
SF3A3-208ENST00000489537 Q6ZSA8 131 aa3.91□□□□□ -1.78
SF3A3-208ENST00000489537 SERP2Q8N6R1 65 aa3.91□□□□□ -1.78
SF3A3-208ENST00000489537 PSORS1C2Q9UIG4 136 aa3.91□□□□□ -1.78
SF3A3-208ENST00000489537 A0A1W2PNM2 257 aa3.9□□□□□ -1.79
SF3A3-208ENST00000489537 IGLV7-43P04211 117 aa3.9□□□□□ -1.79
SF3A3-208ENST00000489537 CD164Q04900 197 aa3.9□□□□□ -1.79
SF3A3-208ENST00000489537 SSBP3-AS1Q7Z2R9 100 aa3.9□□□□□ -1.79
SF3A3-208ENST00000489537 HERC1Q15751 4861 aa3.89□□□□□ -1.79
SF3A3-208ENST00000489537 NDUFB1O75438 58 aa3.89□□□□□ -1.79
SF3A3-208ENST00000489537 COX7CP15954 63 aa3.89□□□□□ -1.79
SF3A3-208ENST00000489537 C3orf22Q8N5N4 141 aa3.89□□□□□ -1.79
SF3A3-208ENST00000489537 DNAH8Q96JB1 4490 aa3.88□□□□□ -1.79
SF3A3-208ENST00000489537 PANO1I0J062 215 aa3.88□□□□□ -1.79
SF3A3-208ENST00000489537 FAM229BQ4G0N7 80 aa3.88□□□□□ -1.79
SF3A3-208ENST00000489537 C9orf153Q5TBE3 101 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms