RNA–Protein interactions for RNA: ENST00000489475.5

HOXB3-210, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-210ENST00000489475 ZNF706Q9Y5V0 76 aaPredicted RBP16.3■□□□□ 0.2
HOXB3-210ENST00000489475 DYNC1H1Q14204 4646 aaKnown RBP16.3■□□□□ 0.2
HOXB3-210ENST00000489475 PDE6GP18545 87 aa16.29■□□□□ 0.2
HOXB3-210ENST00000489475 FAM240AA0A1B0GVK7 77 aa16.29■□□□□ 0.2
HOXB3-210ENST00000489475 F8WEM9 126 aa16.29■□□□□ 0.2
HOXB3-210ENST00000489475 CCKP06307 115 aa16.29■□□□□ 0.2
HOXB3-210ENST00000489475 TRBV7-4A0A0J9YYF1 115 aa16.28■□□□□ 0.2
HOXB3-210ENST00000489475 Q6ZQT0 140 aa16.27■□□□□ 0.2
HOXB3-210ENST00000489475 SPRR4Q96PI1 79 aa16.27■□□□□ 0.2
HOXB3-210ENST00000489475 ACYP1P07311 99 aa16.25■□□□□ 0.19
HOXB3-210ENST00000489475 LINC00483Q53H64 154 aa16.2■□□□□ 0.18
HOXB3-210ENST00000489475 SVIPQ8NHG7 77 aa16.2■□□□□ 0.18
HOXB3-210ENST00000489475 RPL37AP61513 92 aaKnown RBP16.17■□□□□ 0.18
HOXB3-210ENST00000489475 SMR3BP02814 79 aaPredicted RBP16.17■□□□□ 0.18
HOXB3-210ENST00000489475 SIGMAR1Q99720 223 aa16.17■□□□□ 0.18
HOXB3-210ENST00000489475 CDIP1Q9H305 208 aa16.16■□□□□ 0.18
HOXB3-210ENST00000489475 IGLV8-61A0A075B6I0 122 aa16.15■□□□□ 0.18
HOXB3-210ENST00000489475 LINC00846Q9NV44 126 aa16.1■□□□□ 0.17
HOXB3-210ENST00000489475 APOBP04114 4563 aaKnown RBP16.09■□□□□ 0.17
HOXB3-210ENST00000489475 ANAPC11Q9NYG5 84 aa16.09■□□□□ 0.17
HOXB3-210ENST00000489475 Q6JHZ5 121 aa16.08■□□□□ 0.17
HOXB3-210ENST00000489475 IGFL1Q6UW32 110 aa16.08■□□□□ 0.17
HOXB3-210ENST00000489475 IGLV9-49A0A0B4J1Y8 123 aa16.08■□□□□ 0.16
HOXB3-210ENST00000489475 VPS13BQ7Z7G8 4022 aa16.07■□□□□ 0.16
HOXB3-210ENST00000489475 C9orf153Q5TBE3 101 aa16.05■□□□□ 0.16
HOXB3-210ENST00000489475 Q8NBF4 154 aa16.05■□□□□ 0.16
HOXB3-210ENST00000489475 A0A1W2PNM2 257 aa16.04■□□□□ 0.16
HOXB3-210ENST00000489475 A0A0G2JQZ4 141 aa16.03■□□□□ 0.16
HOXB3-210ENST00000489475 CDK2AP2O75956 126 aa16.01■□□□□ 0.15
HOXB3-210ENST00000489475 A0A1B0GW54 56 aa16■□□□□ 0.15
HOXB3-210ENST00000489475 SPINK6Q6UWN8 80 aa16■□□□□ 0.15
HOXB3-210ENST00000489475 UBL5Q9BZL1 73 aa15.99■□□□□ 0.15
HOXB3-210ENST00000489475 MOBPQ13875 183 aa15.98■□□□□ 0.15
HOXB3-210ENST00000489475 LINC00643Q86TS7 51 aa15.97■□□□□ 0.15
HOXB3-210ENST00000489475 CRYGAP11844 174 aa15.96■□□□□ 0.14
HOXB3-210ENST00000489475 KRTAP10-4P60372 401 aaPredicted RBP15.94■□□□□ 0.14
HOXB3-210ENST00000489475 FAM229BQ4G0N7 80 aa15.94■□□□□ 0.14
HOXB3-210ENST00000489475 FAM229AH3BQW9 127 aa15.92■□□□□ 0.14
HOXB3-210ENST00000489475 MT-ATP8P03928 68 aa15.91■□□□□ 0.14
HOXB3-210ENST00000489475 KRTAP1-4P0C5Y4 121 aa15.91■□□□□ 0.14
HOXB3-210ENST00000489475 PLA2G1BP04054 148 aaKnown RBP15.9■□□□□ 0.14
HOXB3-210ENST00000489475 Q6ZVQ6 151 aa15.9■□□□□ 0.14
HOXB3-210ENST00000489475 Q6Q795 121 aa15.89■□□□□ 0.13
HOXB3-210ENST00000489475 FAT1Q14517 4588 aa15.87■□□□□ 0.13
HOXB3-210ENST00000489475 A0A087X002 238 aa15.87■□□□□ 0.13
HOXB3-210ENST00000489475 NREPQ16612 68 aa15.87■□□□□ 0.13
HOXB3-210ENST00000489475 SSBP3-AS1Q7Z2R9 100 aa15.84■□□□□ 0.13
HOXB3-210ENST00000489475 A0A087WSZ3 146 aa15.84■□□□□ 0.13
HOXB3-210ENST00000489475 TRBV7-7A0A0K0K1E9 115 aa15.82■□□□□ 0.12
HOXB3-210ENST00000489475 KRTAP13-2Q52LG2 175 aa15.81■□□□□ 0.12
HOXB3-210ENST00000489475 ATP5EP2Q5VTU8 51 aa15.8■□□□□ 0.12
HOXB3-210ENST00000489475 IGKV3D-7A0A0C4DH55 119 aa15.79■□□□□ 0.12
HOXB3-210ENST00000489475 Q5VSD8 79 aa15.79■□□□□ 0.12
HOXB3-210ENST00000489475 HRCT1Q6UXD1 115 aa15.79■□□□□ 0.12
HOXB3-210ENST00000489475 HSPG2P98160 4391 aa15.76■□□□□ 0.11
HOXB3-210ENST00000489475 EPPK1P58107 5090 aaKnown RBP15.72■□□□□ 0.11
HOXB3-210ENST00000489475 CXCL6P80162 114 aa15.71■□□□□ 0.11
HOXB3-210ENST00000489475 CD164Q04900 197 aa15.71■□□□□ 0.11
HOXB3-210ENST00000489475 IMUPQ9GZP8 106 aa15.71■□□□□ 0.1
HOXB3-210ENST00000489475 RYR1P21817 5038 aa15.7■□□□□ 0.1
HOXB3-210ENST00000489475 TYMSOSQ8TAI1 123 aa15.7■□□□□ 0.1
HOXB3-210ENST00000489475 BPY2O14599 106 aa15.69■□□□□ 0.1
HOXB3-210ENST00000489475 PRR26Q8N8Z3 221 aa15.68■□□□□ 0.1
HOXB3-210ENST00000489475 SS18L2Q9UHA2 77 aa15.68■□□□□ 0.1
HOXB3-210ENST00000489475 Q8N1X5 172 aa15.64■□□□□ 0.09
HOXB3-210ENST00000489475 HIST1H4AP62805 103 aaKnown RBP15.63■□□□□ 0.09
HOXB3-210ENST00000489475 KIAA1109Q2LD37 5005 aa15.61■□□□□ 0.09
HOXB3-210ENST00000489475 DEFB116Q30KQ4 102 aa15.59■□□□□ 0.09
HOXB3-210ENST00000489475 KRTAP17-1Q9BYP8 105 aa15.59■□□□□ 0.09
HOXB3-210ENST00000489475 LINC00472Q9H8W2 130 aa15.59■□□□□ 0.09
HOXB3-210ENST00000489475 C4orf48Q5BLP8 95 aa15.58■□□□□ 0.08
HOXB3-210ENST00000489475 A0A087WVE0 104 aa15.52■□□□□ 0.08
HOXB3-210ENST00000489475 DSCR10P59022 87 aa15.52■□□□□ 0.08
HOXB3-210ENST00000489475 Q8N9L7 120 aa15.52■□□□□ 0.08
HOXB3-210ENST00000489475 ANAPC13Q9BS18 74 aa15.52■□□□□ 0.08
HOXB3-210ENST00000489475 PKHD1L1Q86WI1 4243 aa15.51■□□□□ 0.07
HOXB3-210ENST00000489475 LINC00304Q8N9R0 145 aa15.51■□□□□ 0.07
HOXB3-210ENST00000489475 J3KT08 172 aa15.5■□□□□ 0.07
HOXB3-210ENST00000489475 Q96NJ1 140 aa15.5■□□□□ 0.07
HOXB3-210ENST00000489475 SPINK1P00995 79 aa15.5■□□□□ 0.07
HOXB3-210ENST00000489475 Q5XG85 94 aa15.48■□□□□ 0.07
HOXB3-210ENST00000489475 LIMD2Q9BT23 127 aa15.48■□□□□ 0.07
HOXB3-210ENST00000489475 IGKV4-1P06312 121 aa15.47■□□□□ 0.07
HOXB3-210ENST00000489475 SPAG11AQ6PDA7 123 aa15.47■□□□□ 0.07
HOXB3-210ENST00000489475 ASB16-AS1Q495Z4 193 aa15.46■□□□□ 0.07
HOXB3-210ENST00000489475 FAM236AA0A1B0GUQ0 79 aa15.45■□□□□ 0.06
HOXB3-210ENST00000489475 FAM236BA0A1B0GV22 79 aa15.45■□□□□ 0.06
HOXB3-210ENST00000489475 K7EQZ3 153 aa15.45■□□□□ 0.06
HOXB3-210ENST00000489475 A8MWP4 228 aa15.42■□□□□ 0.06
HOXB3-210ENST00000489475 RPS29P62273 56 aaKnown RBP15.38■□□□□ 0.05
HOXB3-210ENST00000489475 NDUFB1O75438 58 aa15.38■□□□□ 0.05
HOXB3-210ENST00000489475 PRR15Q8IV56 129 aa15.36■□□□□ 0.05
HOXB3-210ENST00000489475 C1orf195Q5TG92 126 aa15.33■□□□□ 0.05
HOXB3-210ENST00000489475 KRTAP10-8P60410 259 aa15.33■□□□□ 0.04
HOXB3-210ENST00000489475 FLG2Q5D862 2391 aaPredicted RBP15.31■□□□□ 0.04
HOXB3-210ENST00000489475 A0A1B0GVX0 72 aa15.26■□□□□ 0.03
HOXB3-210ENST00000489475 HCG22E2RYF7 251 aa15.26■□□□□ 0.03
HOXB3-210ENST00000489475 LRP1Q07954 4544 aaKnown RBP15.26■□□□□ 0.03
HOXB3-210ENST00000489475 ATOX1O00244 68 aa15.25■□□□□ 0.03
HOXB3-210ENST00000489475 IGHV6-1A0A0B4J1U7 121 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms