RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 CDK2AP2O75956 126 aa6.07□□□□□ -1.44
USP11-211ENST00000489111 PDE6GP18545 87 aa6.07□□□□□ -1.44
USP11-211ENST00000489111 LOC110117498A0A087WWA1 95 aa6.06□□□□□ -1.44
USP11-211ENST00000489111 C21orf62-AS1Q17RA5 79 aa6.06□□□□□ -1.44
USP11-211ENST00000489111 LINC00483Q53H64 154 aa6.06□□□□□ -1.44
USP11-211ENST00000489111 DYNC1H1Q14204 4646 aaKnown RBP6.05□□□□□ -1.44
USP11-211ENST00000489111 DNAH8Q96JB1 4490 aa6.05□□□□□ -1.44
USP11-211ENST00000489111 SMIM29Q86T20 159 aa6.05□□□□□ -1.44
USP11-211ENST00000489111 TRBV7-4A0A0J9YYF1 115 aa6.04□□□□□ -1.44
USP11-211ENST00000489111 Q6ZQT0 140 aa6.04□□□□□ -1.44
USP11-211ENST00000489111 VPS25Q9BRG1 176 aa6.04□□□□□ -1.44
USP11-211ENST00000489111 LRP1BQ9NZR2 4599 aa6.03□□□□□ -1.44
USP11-211ENST00000489111 IGLV9-49A0A0B4J1Y8 123 aa6.03□□□□□ -1.44
USP11-211ENST00000489111 FAM240AA0A1B0GVK7 77 aa6.03□□□□□ -1.44
USP11-211ENST00000489111 FAM229AH3BQW9 127 aa6.03□□□□□ -1.44
USP11-211ENST00000489111 PLA2G1BP04054 148 aaKnown RBP6.03□□□□□ -1.44
USP11-211ENST00000489111 CCKP06307 115 aa6.03□□□□□ -1.44
USP11-211ENST00000489111 C9orf153Q5TBE3 101 aa6.03□□□□□ -1.44
USP11-211ENST00000489111 IGLV8-61A0A075B6I0 122 aa6.02□□□□□ -1.45
USP11-211ENST00000489111 ACYP1P07311 99 aa6.02□□□□□ -1.45
USP11-211ENST00000489111 Q6JHZ5 121 aa6.02□□□□□ -1.45
USP11-211ENST00000489111 SPINK6Q6UWN8 80 aa6.02□□□□□ -1.45
USP11-211ENST00000489111 ANAPC11Q9NYG5 84 aa6.01□□□□□ -1.45
USP11-211ENST00000489111 MOBPQ13875 183 aa6□□□□□ -1.45
USP11-211ENST00000489111 Q8NBF4 154 aa6□□□□□ -1.45
USP11-211ENST00000489111 FAM229BQ4G0N7 80 aa5.99□□□□□ -1.45
USP11-211ENST00000489111 IGFL1Q6UW32 110 aa5.99□□□□□ -1.45
USP11-211ENST00000489111 Q5VSD8 79 aa5.98□□□□□ -1.45
USP11-211ENST00000489111 SRRM2Q9UQ35 2752 aaKnown RBP5.97□□□□□ -1.45
USP11-211ENST00000489111 KRTAP10-4P60372 401 aaPredicted RBP5.97□□□□□ -1.45
USP11-211ENST00000489111 A0A1W2PNM2 257 aa5.96□□□□□ -1.46
USP11-211ENST00000489111 CRYGAP11844 174 aa5.96□□□□□ -1.46
USP11-211ENST00000489111 APOBP04114 4563 aaKnown RBP5.96□□□□□ -1.46
USP11-211ENST00000489111 A0A0G2JQZ4 141 aa5.95□□□□□ -1.46
USP11-211ENST00000489111 A0A1B0GW54 56 aa5.95□□□□□ -1.46
USP11-211ENST00000489111 KRTAP1-4P0C5Y4 121 aa5.95□□□□□ -1.46
USP11-211ENST00000489111 UBL5Q9BZL1 73 aa5.95□□□□□ -1.46
USP11-211ENST00000489111 LINC00846Q9NV44 126 aa5.95□□□□□ -1.46
USP11-211ENST00000489111 A0A087X002 238 aa5.94□□□□□ -1.46
USP11-211ENST00000489111 CDIP1Q9H305 208 aa5.94□□□□□ -1.46
USP11-211ENST00000489111 Q6Q795 121 aa5.93□□□□□ -1.46
USP11-211ENST00000489111 SSBP3-AS1Q7Z2R9 100 aa5.93□□□□□ -1.46
USP11-211ENST00000489111 Q8N1X5 172 aa5.92□□□□□ -1.46
USP11-211ENST00000489111 A0A087WSZ3 146 aa5.91□□□□□ -1.46
USP11-211ENST00000489111 KRTAP13-2Q52LG2 175 aa5.91□□□□□ -1.46
USP11-211ENST00000489111 HRCT1Q6UXD1 115 aa5.91□□□□□ -1.46
USP11-211ENST00000489111 LINC00643Q86TS7 51 aa5.91□□□□□ -1.46
USP11-211ENST00000489111 TYMSOSQ8TAI1 123 aa5.91□□□□□ -1.46
USP11-211ENST00000489111 TRBV7-7A0A0K0K1E9 115 aa5.9□□□□□ -1.46
USP11-211ENST00000489111 NREPQ16612 68 aa5.9□□□□□ -1.46
USP11-211ENST00000489111 Q6ZVQ6 151 aa5.9□□□□□ -1.46
USP11-211ENST00000489111 CD164Q04900 197 aa5.89□□□□□ -1.47
USP11-211ENST00000489111 ATP5EP2Q5VTU8 51 aa5.89□□□□□ -1.47
USP11-211ENST00000489111 PRR26Q8N8Z3 221 aa5.89□□□□□ -1.47
USP11-211ENST00000489111 SS18L2Q9UHA2 77 aa5.89□□□□□ -1.47
USP11-211ENST00000489111 VPS13BQ7Z7G8 4022 aa5.88□□□□□ -1.47
USP11-211ENST00000489111 C4orf48Q5BLP8 95 aa5.87□□□□□ -1.47
USP11-211ENST00000489111 MT-ATP8P03928 68 aa5.86□□□□□ -1.47
USP11-211ENST00000489111 SIGMAR1Q99720 223 aa5.86□□□□□ -1.47
USP11-211ENST00000489111 IGKV3D-7A0A0C4DH55 119 aa5.85□□□□□ -1.47
USP11-211ENST00000489111 EPPK1P58107 5090 aaKnown RBP5.85□□□□□ -1.47
USP11-211ENST00000489111 RYR1P21817 5038 aa5.85□□□□□ -1.47
USP11-211ENST00000489111 HSPG2P98160 4391 aa5.85□□□□□ -1.47
USP11-211ENST00000489111 BPY2O14599 106 aa5.84□□□□□ -1.47
USP11-211ENST00000489111 LINC00304Q8N9R0 145 aa5.84□□□□□ -1.47
USP11-211ENST00000489111 LIMD2Q9BT23 127 aa5.84□□□□□ -1.47
USP11-211ENST00000489111 FAT1Q14517 4588 aa5.84□□□□□ -1.47
USP11-211ENST00000489111 CXCL6P80162 114 aa5.83□□□□□ -1.48
USP11-211ENST00000489111 SPAG11AQ6PDA7 123 aa5.82□□□□□ -1.48
USP11-211ENST00000489111 KRTAP17-1Q9BYP8 105 aa5.82□□□□□ -1.48
USP11-211ENST00000489111 SPINK1P00995 79 aa5.81□□□□□ -1.48
USP11-211ENST00000489111 KIAA1109Q2LD37 5005 aa5.81□□□□□ -1.48
USP11-211ENST00000489111 J3KT08 172 aa5.8□□□□□ -1.48
USP11-211ENST00000489111 HIST1H4AP62805 103 aaKnown RBP5.8□□□□□ -1.48
USP11-211ENST00000489111 DEFB116Q30KQ4 102 aa5.79□□□□□ -1.48
USP11-211ENST00000489111 IMUPQ9GZP8 106 aa5.79□□□□□ -1.48
USP11-211ENST00000489111 LINC00472Q9H8W2 130 aa5.79□□□□□ -1.48
USP11-211ENST00000489111 RPS29P62273 56 aaKnown RBP5.78□□□□□ -1.48
USP11-211ENST00000489111 ASB16-AS1Q495Z4 193 aa5.78□□□□□ -1.48
USP11-211ENST00000489111 Q5XG85 94 aa5.78□□□□□ -1.48
USP11-211ENST00000489111 IGKV4-1P06312 121 aa5.77□□□□□ -1.49
USP11-211ENST00000489111 Q8N9L7 120 aa5.77□□□□□ -1.49
USP11-211ENST00000489111 Q96NJ1 140 aa5.76□□□□□ -1.49
USP11-211ENST00000489111 A8MWP4 228 aa5.75□□□□□ -1.49
USP11-211ENST00000489111 NDUFB1O75438 58 aa5.75□□□□□ -1.49
USP11-211ENST00000489111 DSCR10P59022 87 aa5.75□□□□□ -1.49
USP11-211ENST00000489111 KRTAP10-8P60410 259 aa5.75□□□□□ -1.49
USP11-211ENST00000489111 K7EQZ3 153 aa5.74□□□□□ -1.49
USP11-211ENST00000489111 OXTP01178 125 aa5.74□□□□□ -1.49
USP11-211ENST00000489111 PKHD1L1Q86WI1 4243 aa5.74□□□□□ -1.49
USP11-211ENST00000489111 BIRC6Q9NR09 4857 aa5.73□□□□□ -1.49
USP11-211ENST00000489111 A0A087WVE0 104 aa5.73□□□□□ -1.49
USP11-211ENST00000489111 C1orf195Q5TG92 126 aa5.73□□□□□ -1.49
USP11-211ENST00000489111 KRTAP4-5Q9BYR2 181 aa5.73□□□□□ -1.49
USP11-211ENST00000489111 FAM236AA0A1B0GUQ0 79 aa5.72□□□□□ -1.49
USP11-211ENST00000489111 FAM236BA0A1B0GV22 79 aa5.72□□□□□ -1.49
USP11-211ENST00000489111 PRR15Q8IV56 129 aa5.72□□□□□ -1.49
USP11-211ENST00000489111 SCGB1A1P11684 91 aa5.71□□□□□ -1.5
USP11-211ENST00000489111 IGHV6-1A0A0B4J1U7 121 aa5.7□□□□□ -1.5
USP11-211ENST00000489111 A0A1B0GVX0 72 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms